mRNA_Ecto-sp13_S_contig14243.3292.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14243.3292.1 vs. uniprot
Match: D8LC74_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC74_ECTSI) HSP 1 Score: 266 bits (681), Expect = 3.750e-78 Identity = 158/165 (95.76%), Postives = 161/165 (97.58%), Query Frame = 1
Query: 1 QATVRDKRLKRPSLPDVKGTADDVMDEDEFKLVTQEREAKRNYKEAFEVLAKAKAKMEASAQQEEDLRKDLIESFDGYLEEKAEGGFEEDGLDIDSRAPLSPGGGIRWDEGGFEDTGSLEQAVVTRVADKDQNSLAFFQAQXXXXXXXXXXXXXXXXXHRSKRNR 495
QATVRDKRLKRPSLPDVKGTADDVMDEDEFKLVTQERE KRNYKEAFEVLAKAKAKMEASAQQEE+LRKDLI+SFDGYLEEKAEGGFEEDGLDIDSRAPLSPGGGIRWDEGGFEDTGSLEQA +TRVADKDQNSLAFFQ XXXXXXXXXXXXXXXXXHRSKRNR
Sbjct: 689 QATVRDKRLKRPSLPDVKGTADDVMDEDEFKLVTQERETKRNYKEAFEVLAKAKAKMEASAQQEEELRKDLIQSFDGYLEEKAEGGFEEDGLDIDSRAPLSPGGGIRWDEGGFEDTGSLEQAALTRVADKDQNSLAFFQXXXXXXXXXXXXXXXXXXXHRSKRNR 853
BLAST of mRNA_Ecto-sp13_S_contig14243.3292.1 vs. uniprot
Match: A0A7S2W4M2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4M2_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 3.470e-8 Identity = 46/154 (29.87%), Postives = 82/154 (53.25%), Query Frame = 1
Query: 37 SLPDVKGT-ADDVMDEDEFKLVTQEREAKRNYKEAFEVLAKAKAKMEASAQQEEDLRKDLIESFDGYLEEKAEGGFEEDGLDIDSRAPLSPGGGIRWDEGGFEDTGSLEQAVVTRVADKDQNSLAFFQAQXXXXXXXXXXXXXXXXXHRSKRNR 495
++ ++KG +DV+DE+EF+L+ ++REAK+ Y+ A+E L +A++EA+ ++ L+ LI +F+ + A+G A +S + E ++ E+ + RV ++D +SLAFFQAQ H++KRNR
Sbjct: 187 AIEEMKGAEVEDVVDEEEFRLMKRQREAKKIYRAAYEDLNGLRAEIEANQKEVNALKYQLIGAFEEWYRTMAQG----------DEASMS-----KDPEDALDEQEKFEKLEIDRVVNEDPDSLAFFQAQKTRRANLTQNHIALRQMHKNKRNR 325
BLAST of mRNA_Ecto-sp13_S_contig14243.3292.1 vs. uniprot
Match: A0A7S2XVZ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVZ2_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.620e-7 Identity = 44/146 (30.14%), Postives = 72/146 (49.32%), Query Frame = 1
Query: 67 DVMDEDEFKLVTQEREAKRNYKEAFEVLAKAKAKMEASAQQEEDLRKDLIESFDGY---LEEKAEGGFEEDGLDIDSRAPLSPGGGIRWDEGGFEDTGSLEQAVVTRVADKDQNSLAFFQAQXXXXXXXXXXXXXXXXXHRSKRNR 495
D+MDE+EF+L+ QEREAKR Y+ A++ L + KA++++ + + E+L+ L+ F+ + GG + + D D +D E+ + R+ D+D +SL FFQAQ H+SKR R
Sbjct: 99 DIMDEEEFRLIRQEREAKRAYRAAYDELRQVKAEVKSLSSEVEELKFQLLHDFETWHAGSRRLMTGGKGKGAPEFDDDED---------DNDRLDDGEHFERMEMERIMDQDPDSLVFFQAQKTRIATKNQNSLNLRQMHKSKRIR 235
BLAST of mRNA_Ecto-sp13_S_contig14243.3292.1 vs. uniprot
Match: A0A662XEY5_9STRA (Kinesin-like protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XEY5_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.610e-7 Identity = 48/126 (38.10%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 64 DDVMDEDEFKLVTQEREAKRNYKEAFEVLAKAKAKMEASAQQEEDLRKDLIESFDGYLEEK------AEGGFEEDGLDIDSRAPLSPGGGIRWDEGGFEDTGSLEQAVVTRVADKDQNSLAFFQAQ 423
D+V+DE+EF L+T EREAKR+Y+ F L AKA++E + + E LR+ L+ F+ + EE+ ++GG G D +R S + +D +Q V RV +D +SLAFFQAQ
Sbjct: 728 DEVVDEEEFLLMTAEREAKRDYRSLFGDLKDAKAELEFAHRSVELLRRRLVREFEDWYEEEGHAHALSKGGG---GFDAFARPGFSK-------DDKLDDGEMFDQMEVERVRAQDPDSLAFFQAQ 843
BLAST of mRNA_Ecto-sp13_S_contig14243.3292.1 vs. uniprot
Match: A0A2D4C292_PYTIN (Kinesin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C292_PYTIN) HSP 1 Score: 63.5 bits (153), Expect = 3.090e-7 Identity = 45/123 (36.59%), Postives = 71/123 (57.72%), Query Frame = 1
Query: 64 DDVMDEDEFKLVTQEREAKRNYKEAFEVLAKAKAKMEASAQQEEDLRKDLIESFDGYLEEKAE--GGFEEDGLDIDSRAPLSPGGGIRWDEGGFEDTGS-LEQAVVTRVADKDQNSLAFFQAQ 423
D+V+ E+EF L+T EREAKR+Y+ F+ L +A+A+ME +++ E LR L+ F+ + EE+ +D ++ S + + G + D G +Q V RV +D +SLAFFQAQ
Sbjct: 507 DEVVXEEEFLLMTAEREAKRDYRSLFDDLKEARAEMEFTSRSVELLRMRLVREFEDWYEEEGRHLAAIAKDDDELGSGSTVGXSFGAVFSREDKLDXGEKFDQMEVERVRAQDPDSLAFFQAQ 629
BLAST of mRNA_Ecto-sp13_S_contig14243.3292.1 vs. uniprot
Match: H3GEF1_PHYRM (Kinesin-like protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GEF1_PHYRM) HSP 1 Score: 63.2 bits (152), Expect = 4.570e-7 Identity = 52/152 (34.21%), Postives = 77/152 (50.66%), Query Frame = 1
Query: 16 DKRLKRPSLPDVKGTA-------DDVMDEDEFKLVTQEREAKRNYKEAFEVLAKAKAKMEASAQQEEDLRKDLIESFDGYLEEKAEGGFEEDGLDIDSRAPLSPGGGIRWD---------EGGFEDTGSLEQAVVTRVADKDQNSLAFFQAQ 423
DKR +R + KG A D+V+DE+EF L+T EREAKR+Y+ F L AKA++E S + E LR+ L+ F+ + +E+ + A GG +D + +D +Q V R+ +D +SLAFFQAQ
Sbjct: 689 DKRNQRKADGGRKGGAKQVEHERDEVVDEEEFILMTAEREAKRDYRSLFGDLKDAKAELEFSLRSVELLRRRLVREFEDWFDEEGH-----------AHALSKTSGGGAFDACAGPAFSKDDKLDDGEKFDQMEVDRIRAQDPDSLAFFQAQ 829
BLAST of mRNA_Ecto-sp13_S_contig14243.3292.1 vs. uniprot
Match: A0A5D6YES6_9STRA (Kinesin motor domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YES6_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.390e-6 Identity = 48/132 (36.36%), Postives = 71/132 (53.79%), Query Frame = 1
Query: 64 DDVMDEDEFKLVTQEREAKRNYKEAFEVLAKAKAKMEASAQQEEDLRKDLIESFDGYLEE--------KAEGGFEEDGLDIDSRAPLSPGG----GIRWDEGGFEDTGSLEQAVVTRVADKDQNSLAFFQAQ 423
D+V+DE+EF L+T EREAKR+Y+ F+ L +AK+++E + + E LR L+ F+ + EE KA+G G D+ GG + +D +Q V RV +D +SLAFFQAQ
Sbjct: 657 DEVVDEEEFLLMTAEREAKRDYRSLFDDLKEAKSELEFTNRSVELLRMRLMREFEDWYEEEGHASALSKADGSL---GRGYDALGGAFGGGHSFAAAFGKDDKLDDGEKFDQMEVDRVRAQDPDSLAFFQAQ 785
BLAST of mRNA_Ecto-sp13_S_contig14243.3292.1 vs. uniprot
Match: A0A2P4YF29_9STRA (Kinesin-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YF29_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.420e-6 Identity = 46/128 (35.94%), Postives = 67/128 (52.34%), Query Frame = 1
Query: 64 DDVMDEDEFKLVTQEREAKRNYKEAFEVLAKAKAKMEASAQQEEDLRKDLIESFDGYLEE--------KAEGGFEEDGLDIDSRAPLSPGGGIRWDEGGFEDTGSLEQAVVTRVADKDQNSLAFFQAQ 423
D+V+DE+EF L+T EREAKR+Y+ F L K+++E S + E LR+ L+ F+ + +E K GG D +R S E +D +Q V R+ +D +SLAFFQAQ
Sbjct: 135 DEVVDEEEFILMTAEREAKRDYRSLFGDLKDVKSELEFSLRSVELLRRRLVREFEDWYDEEGHAHALSKNSGGT----FDAFTRPAFSK-------EDKLDDGEKFDQMEVDRIRAQDPDSLAFFQAQ 251
BLAST of mRNA_Ecto-sp13_S_contig14243.3292.1 vs. uniprot
Match: D0NAK4_PHYIT (Kinesin-like protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NAK4_PHYIT) HSP 1 Score: 60.5 bits (145), Expect = 3.280e-6 Identity = 43/121 (35.54%), Postives = 66/121 (54.55%), Query Frame = 1
Query: 64 DDVMDEDEFKLVTQEREAKRNYKEAFEVLAKAKAKMEASAQQEEDLRKDLIESFDGYLEEKAEGGFEEDGLDIDSRAPLSPGGGIRWDEGGFEDTGS-LEQAVVTRVADKDQNSLAFFQAQ 423
D+V+DE+EF L+T EREAKR+Y+ F L AKA++E + + E LR+ L+ F+ + E++ L + + + F D G +Q V R+ +D +SLAFFQAQ
Sbjct: 697 DEVVDEEEFILMTAEREAKRDYRSLFGDLKDAKAELEFALRSVELLRRRLVREFEDWYEDEGRA----HALSKNQSGAFDAYARPAFSKDDFLDDGEKFDQMEVERIRAQDPDSLAFFQAQ 813
BLAST of mRNA_Ecto-sp13_S_contig14243.3292.1 vs. uniprot
Match: A0A0W8DWR6_PHYNI (Kinesin-like protein n=11 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DWR6_PHYNI) HSP 1 Score: 60.5 bits (145), Expect = 3.290e-6 Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 64 DDVMDEDEFKLVTQEREAKRNYKEAFEVLAKAKAKMEASAQQEEDLRKDLIESFDGYLEE--------KAEGGFEEDGLDIDSRAPLSPGGGIRWDEGGFEDTGSLEQAVVTRVADKDQNSLAFFQAQ 423
D+V+DE+EF L+T EREAKR+Y+ F L AKA++E S + E LR+ L+ F+ + +E K+ G ++ S+ + +D +Q + R+ +D +SLAFFQAQ
Sbjct: 704 DEVVDEEEFILMTAEREAKRDYRSLFGDLKDAKAELEFSLRSVELLRRRLVREFEDWYDEEGHAHALNKSSGAYDAFARPAFSKDDI------------LDDGEKFDQMEIDRIRAQDPDSLAFFQAQ 819 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14243.3292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14243.3292.1 >prot_Ecto-sp13_S_contig14243.3292.1 ID=prot_Ecto-sp13_S_contig14243.3292.1|Name=mRNA_Ecto-sp13_S_contig14243.3292.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=142bp MDEDEFKLVTQEREAKRNYKEAFEVLAKAKAKMEASAQQEEDLRKDLIESback to top mRNA from alignment at Ecto-sp13_S_contig14243:1883..4329- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14243.3292.1 ID=mRNA_Ecto-sp13_S_contig14243.3292.1|Name=mRNA_Ecto-sp13_S_contig14243.3292.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2447bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14243:1883..4329- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14243:1883..4329- >mRNA_Ecto-sp13_S_contig14243.3292.1 ID=mRNA_Ecto-sp13_S_contig14243.3292.1|Name=mRNA_Ecto-sp13_S_contig14243.3292.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=426bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14243:1883..4329- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |