prot_Ecto-sp13_S_contig14242.3291.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14242.3291.1
Unique Nameprot_Ecto-sp13_S_contig14242.3291.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length208
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14242.3291.1 vs. uniprot
Match: D8LQK1_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQK1_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 7.700e-108
Identity = 164/208 (78.85%), Postives = 169/208 (81.25%), Query Frame = 0 
Query:    1 AFLFGSGGQLGITEFSWNPTDKMGDHTRSECQANFPGRRCFGQQFVPFVTADYWIPQTGVFANPNSYNISTDLPHALEVVDAMVYEPQAHNPQWPSYSQTCLGDAIKYTADMAQAVKNDQTRAALPDRQEIGGPHTGDFDPDDYVLDLEDFASLDDSFAGELVSRISIACANNVEISVIVSTAAGVPTALECEGETCAADGSTLTWNI 208
            AFLFGSGGQLGITEFSWNPTDK GD T+SEC+ANFPGRRCFGQQFVPFVTAD WIP                                 H+PQWPSYSQTCLGDAIKYTADMAQAVKNDQTRAALPDRQEIGGPHTGDFD DDYVLDLEDFASLDDSFAGELVSRISIACANNVEI+V+VS AAGVPTALECEGETC ADGSTLTWNI
Sbjct:  106 AFLFGSGGQLGITEFSWNPTDKTGDPTQSECRANFPGRRCFGQQFVPFVTADNWIPH--------------------------------HDPQWPSYSQTCLGDAIKYTADMAQAVKNDQTRAALPDRQEIGGPHTGDFDSDDYVLDLEDFASLDDSFAGELVSRISIACANNVEIAVVVSAAAGVPTALECEGETCTADGSTLTWNI 281
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14242.3291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQK1_ECTSI7.700e-10878.85VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14242contigEcto-sp13_S_contig14242:700..4468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14242.3291.1mRNA_Ecto-sp13_S_contig14242.3291.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14242 700..4468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14242.3291.1 ID=prot_Ecto-sp13_S_contig14242.3291.1|Name=mRNA_Ecto-sp13_S_contig14242.3291.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=208bp
AFLFGSGGQLGITEFSWNPTDKMGDHTRSECQANFPGRRCFGQQFVPFVT
ADYWIPQTGVFANPNSYNISTDLPHALEVVDAMVYEPQAHNPQWPSYSQT
CLGDAIKYTADMAQAVKNDQTRAALPDRQEIGGPHTGDFDPDDYVLDLED
FASLDDSFAGELVSRISIACANNVEISVIVSTAAGVPTALECEGETCAAD
GSTLTWNI
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