mRNA_Ecto-sp13_S_contig10330.329.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10330.329.1
Unique NamemRNA_Ecto-sp13_S_contig10330.329.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A6H5KFT2_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFT2_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 7.510e-40
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1
Query:    1 RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW 195
            RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW
Sbjct:   66 RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW 130          
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A507EEJ9_9FUNG (Fe2OG dioxygenase domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EEJ9_9FUNG)

HSP 1 Score: 95.1 bits (235), Expect = 9.100e-22
Identity = 42/63 (66.67%), Postives = 48/63 (76.19%), Query Frame = 1
Query:    7 FFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW 195
            FF+LP+  K KIP + GGFTRGYI  GGESGS   E KEAFSYGYPWP+ + P N+LQGPN W
Sbjct:   70 FFALPDDVKNKIPIRAGGFTRGYIPIGGESGSQAVEVKEAFSYGYPWPSTRTPENSLQGPNEW 132          
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A397U6D6_9GLOM (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397U6D6_9GLOM)

HSP 1 Score: 91.7 bits (226), Expect = 4.770e-21
Identity = 43/65 (66.15%), Postives = 47/65 (72.31%), Query Frame = 1
Query:    1 RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW 195
            R+FFSLPE  K  IP K GGFTRGYIG G ESGSH  E KEAFSYGY W  ++ P N+LQG N W
Sbjct:   42 RQFFSLPEEKKNTIPIKSGGFTRGYIGLGNESGSHRFEVKEAFSYGYEWDPNKQPTNSLQGRNEW 106          
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A8H4A5N3_GIGMA (Clavaminate synthase-like protein n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4A5N3_GIGMA)

HSP 1 Score: 92.0 bits (227), Expect = 1.120e-20
Identity = 43/65 (66.15%), Postives = 47/65 (72.31%), Query Frame = 1
Query:    1 RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW 195
            R+FFSLPE  K  IP K GGFTRGYIG G ESGSH  E KEAFSYGY W  ++ P N+LQG N W
Sbjct:   64 RQFFSLPEEKKNTIPIKSGGFTRGYIGLGNESGSHRFEVKEAFSYGYEWDPNEQPTNSLQGRNEW 128          
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A0L0HJP3_SPIPD (Fe2OG dioxygenase domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HJP3_SPIPD)

HSP 1 Score: 91.7 bits (226), Expect = 2.320e-20
Identity = 42/63 (66.67%), Postives = 45/63 (71.43%), Query Frame = 1
Query:    7 FFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW 195
            FF+LP+  K KIP + GGFTRGYIG G ESGS   E KEAFSYGYPW  D  P N LQGPN W
Sbjct:   96 FFNLPQDIKNKIPIRSGGFTRGYIGLGAESGSSALEVKEAFSYGYPWSLDVAPTNNLQGPNEW 158          
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A397TNI1_9GLOM (Fe2OG dioxygenase domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TNI1_9GLOM)

HSP 1 Score: 89.7 bits (221), Expect = 8.370e-20
Identity = 44/66 (66.67%), Postives = 48/66 (72.73%), Query Frame = 1
Query:    1 RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPP-NNALQGPNIW 195
            R+FFSLP  AK  IP K GGFTRGYIG GGESGS   E KEAFSYGY W N++    N+LQGPN W
Sbjct:   63 RQFFSLPSNAKTSIPIKSGGFTRGYIGIGGESGSQRLEVKEAFSYGYEWENNKAKYENSLQGPNEW 128          
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A2Z6QUS6_9GLOM (Fe2OG dioxygenase domain-containing protein n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QUS6_9GLOM)

HSP 1 Score: 89.4 bits (220), Expect = 1.210e-19
Identity = 43/66 (65.15%), Postives = 48/66 (72.73%), Query Frame = 1
Query:    1 RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPP-NNALQGPNIW 195
            R+FFSLP   K  IP K GGFTRGYIG GGESGS + E KEAFSYGY W N++    N+LQGPN W
Sbjct:   66 RQFFSLPSNIKSSIPIKSGGFTRGYIGMGGESGSQMLEVKEAFSYGYEWENNKTKFENSLQGPNEW 131          
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: U9T0D7_RHIID (Fe2OG dioxygenase domain-containing protein n=7 Tax=Rhizophagus TaxID=1129544 RepID=U9T0D7_RHIID)

HSP 1 Score: 87.8 bits (216), Expect = 5.720e-19
Identity = 43/64 (67.19%), Postives = 45/64 (70.31%), Query Frame = 1
Query:    7 FFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPP-NNALQGPNIW 195
            FFSLP   K  IP K GGFTRGYIG GGESGS L E KEAFSYGY W N++    N LQGPN W
Sbjct:   68 FFSLPSNIKSSIPIKSGGFTRGYIGMGGESGSQLLEVKEAFSYGYEWENNKTKFENLLQGPNEW 131          
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A7S2RFT1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFT1_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 8.370e-16
Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 1
Query:    7 FFSLPEAAKRKIPAKKGGFTRGYIGFGGESGS-HLRECKEAFSYGYPWPNDQPPNNALQGPNIW 195
            F  +  A+K      + GF+RGY+ FGGESGS  + ECKE FSYG+PWP ++ P NALQGPN+W
Sbjct:   19 FQGVSPASKASTSLSREGFSRGYVPFGGESGSPEVFECKEGFSYGFPWPMNKKPENALQGPNVW 82          
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A1Y1YF39_9FUNG (Clavaminate synthase-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YF39_9FUNG)

HSP 1 Score: 79.0 bits (193), Expect = 8.680e-16
Identity = 39/66 (59.09%), Postives = 44/66 (66.67%), Query Frame = 1
Query:    1 RRFFSLPEAAKRKIPA-KKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW 195
            R  F L  + K ++P  K GGFTRGYI FGGESGS   E KEAFSYGY WP  + P+N LQG N W
Sbjct:   62 RALFELERSEKDRLPLIKPGGFTRGYIPFGGESGSERLEVKEAFSYGYNWPEGRTPDNGLQGNNEW 127          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFT2_9PHAE7.510e-40100.00Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A507EEJ9_9FUNG9.100e-2266.67Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A397U6D6_9GLOM4.770e-2166.15Fe2OG dioxygenase domain-containing protein (Fragm... [more]
A0A8H4A5N3_GIGMA1.120e-2066.15Clavaminate synthase-like protein n=1 Tax=Gigaspor... [more]
A0A0L0HJP3_SPIPD2.320e-2066.67Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
A0A397TNI1_9GLOM8.370e-2066.67Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A2Z6QUS6_9GLOM1.210e-1965.15Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
U9T0D7_RHIID5.720e-1967.19Fe2OG dioxygenase domain-containing protein n=7 Ta... [more]
A0A7S2RFT1_9STRA8.370e-1654.69Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Y1YF39_9FUNG8.680e-1659.09Clavaminate synthase-like protein n=1 Tax=Basidiob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10330contigEcto-sp13_S_contig10330:4074..4979 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeFungi
Stop0
Start0
Seed ortholog score92.4
Seed ortholog evalue8.2e-17
Seed eggNOG ortholog109760.SPPG_03154T0
Model size198
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.non-haem dioxygenase in morphine synthesis N-terminal
EggNOG OGs3A0I9@33154,3Q34N@4751,COG3491@1,KOG0143@2759
Cds size195
COG Functional cat.Q
Best tax levelFungi
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462523.8947916-CDS-Ecto-sp13_S_contig10330:4073..42101681462523.8947916-CDS-Ecto-sp13_S_contig10330:4073..4210Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10330 4074..4210 +
1681462523.905012-CDS-Ecto-sp13_S_contig10330:4919..49771681462523.905012-CDS-Ecto-sp13_S_contig10330:4919..4977Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10330 4920..4977 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10330.329.1prot_Ecto-sp13_S_contig10330.329.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10330 4074..4977 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10330.329.1

>prot_Ecto-sp13_S_contig10330.329.1 ID=prot_Ecto-sp13_S_contig10330.329.1|Name=mRNA_Ecto-sp13_S_contig10330.329.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=65bp
RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWP
NDQPPNNALQGPNIW
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mRNA from alignment at Ecto-sp13_S_contig10330:4074..4979+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10330.329.1 ID=mRNA_Ecto-sp13_S_contig10330.329.1|Name=mRNA_Ecto-sp13_S_contig10330.329.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=906bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10330:4074..4979+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGGCGATTTTTTTCCCTTCCGGAAGCGGCGAAACGGAAAATCCCCGCAAA GAAGGGCGGCTTCACCCGAGGCTACATCGGATTCGGCGGAGAGAGCGGAT CGCACCTTCGAGAGTGTAAGGAGGCTTTCAGCTACGGGTGAGGCAACGAG CTTGACACTGCCGCTACTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTGC TGCTGCTACTGCTGTTTGTATGTTGCGATAAATTCTGGTGGTACCACCCG CGGGGCTGCAAATCTCCGCACGTTAATAATGTTTCACTGCTAGAATGCTT CCTGCTCTTTGTTGCTGCTGTCCTCCAGCAACCGATCGCGTTTCTGAAAC TTTTTTTTGGCGCGTGGTGGCGTCCCTTGGCGACGGTGCGAGTGTCACTC TTGTCCTTGGGCCAAACGGTGGACTCGTCAGGGTTCAAAGAGAGGCACAC GCACGCAGGAATGCTGCACATGTTTCGAAGCACGGCCTTCCCAGAATGTT TTTCGACGCCTACGTTGGGCCGGTGCTTCAGCCCTACCAACCTCCTCTTG GAAGGCCGGCCTTCTACCGCGATTGCTCGTAGGCGTTCCCCTGTCTGCTT CACTTTTTCGCCATAGCCCATGGTCAGGTCAGCATGGCAAGAGATATATT TCCGCAATAGGGCGCCCGTGTCAGTTGGACTAATACGGATACTAGAAGGT ACTGGGCGAAGACCAGAACGATGTTTAACGCGAAGACAACACCACCACCA CCAACAACAACAACAACAACAACAATAACAAACAGCGGTGTTTCTTCGTT TCTTTTCCCCTCCAAGATCTGATGTGTTCTCCGTTTCCCCCCGCAGGTAT CCTTGGCCCAACGACCAGCCCCCAAACAACGCGCTCCAGGGCCCTAACAT ATGGCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10330:4074..4979+

>mRNA_Ecto-sp13_S_contig10330.329.1 ID=mRNA_Ecto-sp13_S_contig10330.329.1|Name=mRNA_Ecto-sp13_S_contig10330.329.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=195bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10330:4074..4979+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGGCGATTTTTTTCCCTTCCGGAAGCGGCGAAACGGAAAATCCCCGCAAA
GAAGGGCGGCTTCACCCGAGGCTACATCGGATTCGGCGGAGAGAGCGGAT
CGCACCTTCGAGAGTGTAAGGAGGCTTTCAGCTACGGGTATCCTTGGCCC
AACGACCAGCCCCCAAACAACGCGCTCCAGGGCCCTAACATATGG
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