prot_Ecto-sp13_S_contig1423.3281.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1423.3281.1
Unique Name	prot_Ecto-sp13_S_contig1423.3281.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	103

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: A0A6H5L2I6_9PHAE (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2I6_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 8.770e-69
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0

Query:    1 MNRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 102
            MNRIDYSEKYVDGSFEYRHVILPK TAKILPQSRLLTEDEWR+LGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK
Sbjct:    1 MNRIDYSEKYVDGSFEYRHVILPKETAKILPQSRLLTEDEWRHLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 102

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: W7T145_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T145_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.090e-49
Identity = 72/101 (71.29%), Postives = 88/101 (87.13%), Query Frame = 0

Query:    2 NRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 102
            +RI+YSEKY+D + EYRHVILPK  A+ LP+ RLLTE EWR +GVQQSRGWQHYA+H PEPHILLFRRPLGT+PVTG+V+ ELEREAKEKYAE ++  +++
Sbjct:    3 SRIEYSEKYMDDNHEYRHVILPKEIARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVNAELEREAKEKYAESMNGAVQR 103

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: A0A7S3MEH0_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEH0_9STRA)

HSP 1 Score: 158 bits (399), Expect = 2.570e-48
Identity = 71/95 (74.74%), Postives = 85/95 (89.47%), Query Frame = 0

Query:    3 RIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELS 97
            +I+YSEKY DG +EYRHVILPK +A+ LP++R LTE EWRN+GVQQSRGW+HYA H PEPHILLFRRPLGT+PV+G VDPELEREA+EKY +EL+
Sbjct:    5 QIEYSEKYQDGKYEYRHVILPKDSARNLPKNRTLTELEWRNIGVQQSRGWEHYACHKPEPHILLFRRPLGTDPVSGEVDPELEREAREKYQQELA 99

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: D7G7T5_ECTSI (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T5_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 6.640e-48
Identity = 72/98 (73.47%), Postives = 85/98 (86.73%), Query Frame = 0

Query:    3 RIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGI 100
            RI+YSEKY D SFEYRHVILPK  AK LP+SR+LTE EWR LGVQQSRGW HYA+H PEPHILLF+RPLGT+PV+G+VDP LE+EAK+ Y +EL+D +
Sbjct:    4 RIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQELADKM 101

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: A0A7S2BWV6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWV6_9STRA)

HSP 1 Score: 155 bits (391), Expect = 7.440e-47
Identity = 72/101 (71.29%), Postives = 84/101 (83.17%), Query Frame = 0

Query:    2 NRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 102
            +RI+YSEKY D +FEYRHVILPK  AK LP++RLL E EWR +GVQQSRGWQHYA+H PEPHILLFRRPLGT+PVTG+VD ELER+AK+ Y   L+   RK
Sbjct:   22 SRIEYSEKYTDDAFEYRHVILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVDVELERDAKDAYNASLAVNQRK 122

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: A0A7S1UE56_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE56_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.120e-46
Identity = 69/99 (69.70%), Postives = 82/99 (82.83%), Query Frame = 0

Query:    2 NRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGI 100
            +RI+YSEKY D  FEYRHVILPK  AK +P++R+L E EWRNLGVQQSRGW+HYA+H PEPHILLFRRPLGT+P TGRVD +L+REAKE Y   L + +
Sbjct:   36 SRIEYSEKYNDEDFEYRHVILPKELAKSIPKTRILAEQEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDADLQREAKESYLRTLRENL 134

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: A0A1Z5K5B7_FISSO (Cyclin-dependent kinases regulatory subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5B7_FISSO)

HSP 1 Score: 152 bits (384), Expect = 4.820e-46
Identity = 71/101 (70.30%), Postives = 85/101 (84.16%), Query Frame = 0

Query:    2 NRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 102
            +RI+YSEKY D   EYRHVILPK  AK LP+SRLLTE EWR++GVQQSRGWQHYA+H PEPHILLFRRPLGT+P +GRVDPEL + A+E+Y ++   G+RK
Sbjct:    5 SRIEYSEKYADEVNEYRHVILPKELAKTLPKSRLLTESEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPELLKAAREEYKDQF--GLRK 103

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: A0A7S2BBH9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBH9_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.530e-45
Identity = 68/94 (72.34%), Postives = 79/94 (84.04%), Query Frame = 0

Query:    3 RIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEEL 96
            RI+YSEKY D  +EYRHVILPK  AK LP++RLL+E EWR +GVQQSRGW HYA+H PEPHILLFRRPLGT+PVTG++DP LEREAK+ Y   L
Sbjct:   22 RIEYSEKYQDDKYEYRHVILPKELAKNLPKARLLSEQEWRGIGVQQSRGWAHYAIHRPEPHILLFRRPLGTDPVTGKIDPALEREAKDAYQNNL 115

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: W2P0P1_PHYPR (Cyclin-dependent kinases regulatory subunit n=21 Tax=Peronosporaceae TaxID=4777 RepID=W2P0P1_PHYPR)

HSP 1 Score: 150 bits (380), Expect = 1.850e-45
Identity = 70/96 (72.92%), Postives = 82/96 (85.42%), Query Frame = 0

Query:    2 NRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELS 97
            +RI+YSEKYVD + EYRHVILPK   + LP  RLLTE EWR LGVQQSRGW HYA+H PEPHILLFRRPLGT+P TGRV+PE+E++AKEKYA+E +
Sbjct:    7 SRIEYSEKYVDDTHEYRHVILPKEMQRSLPD-RLLTETEWRQLGVQQSRGWVHYAIHKPEPHILLFRRPLGTDPTTGRVNPEMEKQAKEKYAKEFN 101

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: A0A7R9U1M9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1M9_9STRA)

HSP 1 Score: 151 bits (381), Expect = 4.080e-45
Identity = 68/99 (68.69%), Postives = 82/99 (82.83%), Query Frame = 0

Query:    2 NRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGI 100
            +RI+YSEKY D  FEYRHVILPK  AK L +++LL++ EWR LGVQQSRGW+HYA+H PEPHILLFRRPLGT+P TGRVDPE +REAKE Y   L++ +
Sbjct:   39 SRIEYSEKYNDQDFEYRHVILPKELAKRLSKTKLLSDAEWRELGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDPEAQREAKEAYMRSLTENL 137

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L2I6_9PHAE	8.770e-69	98.04	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
W7T145_9STRA	1.090e-49	71.29	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A7S3MEH0_9STRA	2.570e-48	74.74	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
D7G7T5_ECTSI	6.640e-48	73.47	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A7S2BWV6_9STRA	7.440e-47	71.29	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A7S1UE56_9STRA	1.120e-46	69.70	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A1Z5K5B7_FISSO	4.820e-46	70.30	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A7S2BBH9_9STRA	1.530e-45	72.34	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
W2P0P1_PHYPR	1.850e-45	72.92	Cyclin-dependent kinases regulatory subunit n=21 T...	[more]
A0A7R9U1M9_9STRA	4.080e-45	68.69	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000789	Cyclin-dependent kinase, regulatory subunit	PRINTS	PR00296	CYCLINKINASE	coord: 18..32 score: 55.9 coord: 55..69 score: 77.95 coord: 3..17 score: 56.41 coord: 40..54 score: 76.41
IPR000789	Cyclin-dependent kinase, regulatory subunit	SMART	SM01084	CKS_2	coord: 3..72 e-value: 2.1E-42 score: 156.9
IPR000789	Cyclin-dependent kinase, regulatory subunit	PFAM	PF01111	CKS	coord: 4..70 e-value: 1.1E-34 score: 118.6
IPR000789	Cyclin-dependent kinase, regulatory subunit	PROSITE	PS00945	CKS_2	coord: 58..68
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	GENE3D	3.30.170.10		coord: 1..94 e-value: 2.3E-36 score: 126.0
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	SUPERFAMILY	55637	Cell cycle regulatory proteins	coord: 2..74
None	No IPR available	PANTHER	PTHR23415:SF29	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT-RELATED	coord: 3..75
None	No IPR available	PANTHER	PTHR23415	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7	coord: 3..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1423	contig	Ecto-sp13_S_contig1423:9375..13993 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1423.3281.1	mRNA_Ecto-sp13_S_contig1423.3281.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1423 9328..14113 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1423.3281.1 ID=prot_Ecto-sp13_S_contig1423.3281.1|Name=mRNA_Ecto-sp13_S_contig1423.3281.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
MNRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSR
GWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGI
RK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000789	Cyclin-dep_kinase_reg-sub
IPR036858	Cyclin-dep_kinase_reg-sub_sf