mRNA_Ecto-sp13_S_contig1423.3281.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: A0A6H5L2I6_9PHAE (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2I6_9PHAE) HSP 1 Score: 211 bits (537), Expect = 1.990e-68 Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 3
Query: 48 MNRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 353
MNRIDYSEKYVDGSFEYRHVILPK TAKILPQSRLLTEDEWR+LGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK
Sbjct: 1 MNRIDYSEKYVDGSFEYRHVILPKETAKILPQSRLLTEDEWRHLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 102
BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: W7T145_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T145_9STRA) HSP 1 Score: 163 bits (412), Expect = 2.300e-49 Identity = 72/101 (71.29%), Postives = 88/101 (87.13%), Query Frame = 3
Query: 51 NRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 353
+RI+YSEKY+D + EYRHVILPK A+ LP+ RLLTE EWR +GVQQSRGWQHYA+H PEPHILLFRRPLGT+PVTG+V+ ELEREAKEKYAE ++ +++
Sbjct: 3 SRIEYSEKYMDDNHEYRHVILPKEIARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVNAELEREAKEKYAESMNGAVQR 103
BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: A0A7S1UE56_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE56_9STRA) HSP 1 Score: 160 bits (406), Expect = 4.960e-48 Identity = 73/113 (64.60%), Postives = 88/113 (77.88%), Query Frame = 3
Query: 21 HRPELSLPN----MNRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGI 347
HR + +PN +RI+YSEKY D FEYRHVILPK AK +P++R+L E EWRNLGVQQSRGW+HYA+H PEPHILLFRRPLGT+P TGRVD +L+REAKE Y L + +
Sbjct: 22 HRTQAKMPNGQDYASRIEYSEKYNDEDFEYRHVILPKELAKSIPKTRILAEQEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDADLQREAKESYLRTLRENL 134
BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: A0A7S3MEH0_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEH0_9STRA) HSP 1 Score: 159 bits (403), Expect = 5.390e-48 Identity = 71/95 (74.74%), Postives = 85/95 (89.47%), Query Frame = 3
Query: 54 RIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELS 338
+I+YSEKY DG +EYRHVILPK +A+ LP++R LTE EWRN+GVQQSRGW+HYA H PEPHILLFRRPLGT+PV+G VDPELEREA+EKY +EL+
Sbjct: 5 QIEYSEKYQDGKYEYRHVILPKDSARNLPKNRTLTELEWRNIGVQQSRGWEHYACHKPEPHILLFRRPLGTDPVSGEVDPELEREAREKYQQELA 99
BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: D7G7T5_ECTSI (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T5_ECTSI) HSP 1 Score: 158 bits (400), Expect = 1.970e-47 Identity = 72/96 (75.00%), Postives = 84/96 (87.50%), Query Frame = 3
Query: 54 RIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSD 341
RI+YSEKY D SFEYRHVILPK AK LP+SR+LTE EWR LGVQQSRGW HYA+H PEPHILLF+RPLGT+PV+G+VDP LE+EAK+ Y +EL+D
Sbjct: 4 RIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQELAD 99
BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: A0A7S2BWV6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWV6_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.550e-46 Identity = 72/101 (71.29%), Postives = 84/101 (83.17%), Query Frame = 3
Query: 51 NRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 353
+RI+YSEKY D +FEYRHVILPK AK LP++RLL E EWR +GVQQSRGWQHYA+H PEPHILLFRRPLGT+PVTG+VD ELER+AK+ Y L+ RK
Sbjct: 22 SRIEYSEKYTDDAFEYRHVILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVDVELERDAKDAYNASLAVNQRK 122
BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: A0A1Z5K5B7_FISSO (Cyclin-dependent kinases regulatory subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5B7_FISSO) HSP 1 Score: 154 bits (390), Expect = 4.960e-46 Identity = 71/105 (67.62%), Postives = 87/105 (82.86%), Query Frame = 3
Query: 39 LPNMNRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 353
+ + +RI+YSEKY D EYRHVILPK AK LP+SRLLTE EWR++GVQQSRGWQHYA+H PEPHILLFRRPLGT+P +GRVDPEL + A+E+Y ++ G+RK
Sbjct: 1 MSSASRIEYSEKYADEVNEYRHVILPKELAKTLPKSRLLTESEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPELLKAAREEYKDQF--GLRK 103
BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: A0A7R9U1M9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1M9_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.040e-45 Identity = 71/108 (65.74%), Postives = 87/108 (80.56%), Query Frame = 3
Query: 33 LSLPN---MNRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGI 347
L++PN +RI+YSEKY D FEYRHVILPK AK L +++LL++ EWR LGVQQSRGW+HYA+H PEPHILLFRRPLGT+P TGRVDPE +REAKE Y L++ +
Sbjct: 30 LTMPNHDYASRIEYSEKYNDQDFEYRHVILPKELAKRLSKTKLLSDAEWRELGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDPEAQREAKEAYMRSLTENL 137
BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: A0A7S3P5A6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5A6_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.690e-45 Identity = 68/99 (68.69%), Postives = 83/99 (83.84%), Query Frame = 3
Query: 27 PELSLPNMNRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKY 323
P ++ + +RI+YSEKY D EYRHVILPK AK LP+SRLLTE EWR++GVQQSRGWQHYA+H PEPHILLFRRPLGT+P +GR+DPEL R A+++Y
Sbjct: 28 PFSTMSSASRIEYSEKYADDVNEYRHVILPKELAKTLPKSRLLTESEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRIDPELARAARDEY 126
BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Match: A0A7S2BBH9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBH9_9STRA) HSP 1 Score: 153 bits (387), Expect = 3.170e-45 Identity = 68/94 (72.34%), Postives = 79/94 (84.04%), Query Frame = 3
Query: 54 RIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEEL 335
RI+YSEKY D +EYRHVILPK AK LP++RLL+E EWR +GVQQSRGW HYA+H PEPHILLFRRPLGT+PVTG++DP LEREAK+ Y L
Sbjct: 22 RIEYSEKYQDDKYEYRHVILPKELAKNLPKARLLSEQEWRGIGVQQSRGWAHYAIHRPEPHILLFRRPLGTDPVTGKIDPALEREAKDAYQNNL 115 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1423.3281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1423.3281.1 >prot_Ecto-sp13_S_contig1423.3281.1 ID=prot_Ecto-sp13_S_contig1423.3281.1|Name=mRNA_Ecto-sp13_S_contig1423.3281.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp MNRIDYSEKYVDGSFEYRHVILPKATAKILPQSRLLTEDEWRNLGVQQSRback to top mRNA from alignment at Ecto-sp13_S_contig1423:9328..14113+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1423.3281.1 ID=mRNA_Ecto-sp13_S_contig1423.3281.1|Name=mRNA_Ecto-sp13_S_contig1423.3281.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4786bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1423:9328..14113+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1423:9328..14113+ >mRNA_Ecto-sp13_S_contig1423.3281.1 ID=mRNA_Ecto-sp13_S_contig1423.3281.1|Name=mRNA_Ecto-sp13_S_contig1423.3281.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=309bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1423:9328..14113+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |