prot_Ecto-sp13_S_contig1422.3278.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1422.3278.1
Unique Name	prot_Ecto-sp13_S_contig1422.3278.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	378

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1422.3278.1 vs. uniprot
Match: A0A6H5L7M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7M4_9PHAE)

HSP 1 Score: 480 bits (1236), Expect = 2.180e-166
Identity = 307/393 (78.12%), Postives = 317/393 (80.66%), Query Frame = 0

Query:    8 RGDEHEGHHDEHHGPFGLGEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEVRAEECTQTQTQAALKATANYVKCAFLDYADFQALVHADVAILEDAAACFKTKADEITEEIPRPDDNMSEDEVKALEKETAEKLATAFQECVKEAEAEXXXXSQATVQFLEKMLAEESTVTSSLRRIHTRTPSCFHTTLYHDVGEIVQNV--------------------DLTPEEKDSQDSAIVAVLPAEDTKKLEEQHQEEGSTA-EAGIGXXXXXXXHPHLPNTFGPCPPGQEVHPSDPKACQPSLNSEE--GEEFGDGRDSRREGGGMISLGLSVIGVVAVGXXXXXXXVWAWGKFQSGTRQPGVRYMATGLDNNIGTELGPFGRQYA 377
            RGDEHEGHHDEHHGP GLG+H   XXXXXXXXXXXXXXXXXXXXXXXXXXXX       HE+RA ECTQTQTQAALKATANYVKCAFLDYADFQALVHADV+ILEDAAACFKTKADEI EEIP PDDNMSEDEVKALEKETAEKLATAFQECVKEAEAE    SQATVQFLEKMLAEEST+ + L     + PSC     YHDVGEIVQNV                    D+TPEE+DSQD+A VAVLPAEDTKKLE           EAGI XXXX    P LPNTFGPCPPGQEVHPSDPKACQPSLNSEE  GEEFGDGRDSRREGGGMISLGLSVIGVVAVG  XX   +WAWGKFQSGTRQPGVRYMATGLDNNIGTELGPFGRQYA
Sbjct:   28 RGDEHEGHHDEHHGPVGLGDHEHFXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGD---HEIRAVECTQTQTQAALKATANYVKCAFLDYADFQALVHADVSILEDAAACFKTKADEIAEEIPPPDDNMSEDEVKALEKETAEKLATAFQECVKEAEAEDEEASQATVQFLEKMLAEESTICACLPPFLIKMPSCGPWIRYHDVGEIVQNVCDFIDDGNNTVVADMDIAEVDVTPEERDSQDNATVAVLPAEDTKKLEXXXXXXXXXXXEAGIXXXXXRR--PRLPNTFGPCPPGQEVHPSDPKACQPSLNSEEYQGEEFGDGRDSRREGGGMISLGLSVIGVVAVGGVXXVGGLWAWGKFQSGTRQPGVRYMATGLDNNIGTELGPFGRQYA 415

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1422.3278.1 vs. uniprot
Match: D8LR88_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR88_ECTSI)

HSP 1 Score: 453 bits (1165), Expect = 8.680e-156
Identity = 307/379 (81.00%), Postives = 318/379 (83.91%), Query Frame = 0

Query:    8 RGDEHEGHHDEHHGPFGLGEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEVRAEECTQTQTQAALKATANYVKCAFLDYADFQALVHADVAILEDAAACFKTKADEITEEIPRPDDNMSEDEVKALEKETAEKLATAFQECVKEAEAEXXXXSQATVQFLEKMLAEESTVTSSLRRIHTRTPSCFHTTLYHDVGEIVQNV-----DLTPEEKDSQDSAIVAVLPAEDTKKLEEQHQEEGSTAEAGIGXXXXXXX-HP-HLPNTFGPCPPGQEVHPSDPKACQPSLNSEE--GEEFGDGRDSRREGGGMISLGLSVIGVVAVGXXXXXXXVWAWGKFQSGTRQPGVRYMATGLDNNIGTELGPFGRQYA 377
            RGDEHEG      GPFGLGEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    HEV AEECTQTQTQAALKATANYVKCAFLDYADFQALVHADVAILEDAAACFKTKADEI EEIP PDDNMSE+EVKALE+ETAEKLATAFQECVKEAEA     SQATVQFLEK+LAEEST+ + L     + P+C     YHDVG+IVQNV     DLTPEEKDSQD AIVAVLPAE+TKKL                XXXXXXX HP HLPN FGPCPPGQE HPSDPKACQPS+NSEE  GEEFGDGRD RREGGGMISLGLSV+GVVAVGXXXXXXX WAWGKFQSGTRQPGVRYMATGLDNNIGTELGPFGRQYA
Sbjct:   28 RGDEHEGXXXXXXGPFGLGEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG---HEVHAEECTQTQTQAALKATANYVKCAFLDYADFQALVHADVAILEDAAACFKTKADEIAEEIPPPDDNMSEEEVKALEQETAEKLATAFQECVKEAEAGDEEASQATVQFLEKLLAEESTICACLSPFLIKMPTCGPWIRYHDVGKIVQNVLVAEVDLTPEEKDSQDDAIVAVLPAENTKKLXXXXXXXXXXXXXXXXXXXXXXXEHPAHLPNAFGPCPPGQEAHPSDPKACQPSMNSEEYQGEEFGDGRDGRREGGGMISLGLSVMGVVAVGXXXXXXXXWAWGKFQSGTRQPGVRYMATGLDNNIGTELGPFGRQYA 403

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1422.3278.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1422.3278.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L7M4_9PHAE	2.180e-166	78.12	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LR88_ECTSI	8.680e-156	81.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 146..166
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 343..377
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 318..342
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..317
None	No IPR available	TMHMM	TMhelix		coord: 320..342

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1422	contig	Ecto-sp13_S_contig1422:7362..14993 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1422.3278.1	mRNA_Ecto-sp13_S_contig1422.3278.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1422 6969..15014 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1422.3278.1 ID=prot_Ecto-sp13_S_contig1422.3278.1|Name=mRNA_Ecto-sp13_S_contig1422.3278.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=378bp
MMMMMMIRGDEHEGHHDEHHGPFGLGEHGDHGEHGDNDHHHPEDHEGHDG
HHGPFGEHEHHDGEEGHEVRAEECTQTQTQAALKATANYVKCAFLDYADF
QALVHADVAILEDAAACFKTKADEITEEIPRPDDNMSEDEVKALEKETAE
KLATAFQECVKEAEAEDEEASQATVQFLEKMLAEESTVTSSLRRIHTRTP
SCFHTTLYHDVGEIVQNVDLTPEEKDSQDSAIVAVLPAEDTKKLEEQHQE
EGSTAEAGIGGEEEEEHHPHLPNTFGPCPPGQEVHPSDPKACQPSLNSEE
GEEFGDGRDSRREGGGMISLGLSVIGVVAVGGVVGVGGVWAWGKFQSGTR
QPGVRYMATGLDNNIGTELGPFGRQYA*