prot_Ecto-sp13_S_contig1422.3277.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1422.3277.1
Unique Name	prot_Ecto-sp13_S_contig1422.3277.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	186

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1422.3277.1 vs. uniprot
Match: D8LR87_ECTSI (Binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR87_ECTSI)

HSP 1 Score: 362 bits (930), Expect = 2.810e-126
Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 0

Query:    1 MERFRRGEVAGSVSDFDRAISLQPRLEAYLWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEVSLGSNGVAESGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSGDYMCDVARVHQQARGW 185
            MERFRRGEVAGSVSDFDRAISLQPRLEAY+WQRGISLYYAD+FEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQME SLGSNG A SGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSGDYMCDVARVHQQARGW
Sbjct:   24 MERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADRFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEGSLGSNGAAGSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSGDYMCDVARVHQQARGW 208

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1422.3277.1 vs. uniprot
Match: A0A6H5L4Y5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y5_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 5.920e-126
Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 0

Query:    1 MERFRRGEVAGSVSDFDRAISLQPRLEAYLWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEVSLGSNGVAESGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSGDYMCDVARVHQQARGW 185
            MERFRRGEVAGSVSDFDRAISLQPRLEAY+WQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEVSLGSNGVA SGAPYFY NLYLGLYSEAKGDDVLARKYISAAVRSPY+KSGDYMCDVARVHQQ RGW
Sbjct:   85 MERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEVSLGSNGVAGSGAPYFYVNLYLGLYSEAKGDDVLARKYISAAVRSPYAKSGDYMCDVARVHQQVRGW 269

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1422.3277.1 vs. uniprot
Match: A0A7S1JEY7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JEY7_9EUGL)

HSP 1 Score: 224 bits (570), Expect = 1.140e-69
Identity = 104/185 (56.22%), Postives = 137/185 (74.05%), Query Frame = 0

Query:    1 MERFRRGEVAGSVSDFDRAISLQPRLEAYLWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEVSLGSNGVAESGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSGDYMCDVARVHQQARGW 185
            M++F +G+V GS+ DFDR I+  PR+E Y+WQRG+SLYYA++ +EGSRQFR+DVA+NPNDTEEAIW F+CE+R PS+GF  A+  ++++  + RPYMRAAY LF+G  +E  L +           A  G   FY+NLYLGLY+EAKGD V A++YISAAV SPY +SGDYM  +A VH+  RGW
Sbjct:  168 MQKFTKGDVQGSIEDFDRIIAGAPRMEPYMWQRGLSLYYAEELQEGSRQFRRDVAVNPNDTEEAIWAFLCEARDPSIGFEKARTNMLQVGRDSRPYMRAAYDLFRGTGTEEGLKQ----------AAVDGPSEFYSNLYLGLYAEAKGDSVAAQQYISAAVNSPYRRSGDYMYALAVVHKNLRGW 342

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1422.3277.1 vs. uniprot
Match: A0A835ZJI4_9STRA (Binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJI4_9STRA)

HSP 1 Score: 213 bits (541), Expect = 3.650e-67
Identity = 106/185 (57.30%), Postives = 132/185 (71.35%), Query Frame = 0

Query:    1 MERFRRGEVAGSVSDFDRAISLQPRLEAYLWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEVSLGSNGVAESGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSGDYMCDVARVHQQARGW 185
            MERFR+ +V  S+SDFDRA+ L P L  YLWQRG+SLYYAD+F EG+ QFR DV++NPNDTEEAIW F CE+R  ++GF  A++RL+K+  + RPYMR AYSLF+G  SE DLA   +    S         +FYANLYLGLY+E + +  LAR YI  AV S Y  +GDYMC +ARVHQ+ RGW
Sbjct:   28 MERFRKAKVQESISDFDRALQLSPALGPYLWQRGLSLYYADRFAEGAAQFRLDVSVNPNDTEEAIWAFACEAR--TLGFQEARKRLLKVGQDTRPYMRTAYSLFQGSTSEQDLAMVGQTDDRS---------HFYANLYLGLYAECREEVDLARHYIGLAVGSKYCATGDYMCSLARVHQKVRGW 201

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1422.3277.1 vs. uniprot
Match: A0A7S0D5P5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D5P5_MICPS)

HSP 1 Score: 185 bits (470), Expect = 3.450e-56
Identity = 94/186 (50.54%), Postives = 126/186 (67.74%), Query Frame = 0

Query:    1 MERFRRGEVAGSVSDFDRAISLQPRLEAYLWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEVSLGSNGVAESGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPY-SKSGDYMCDVARVHQQARGW 185
            M +F +G+V GS++DFD  I+  P    Y+WQRG+SLYYA++  EGS QFR+DVA+NPNDTEEA+W F+CE+R   +GF  A++ L+ +  + R YMRAAY+LF G   E  L      ++ +NG A   A  FY  LYLGLY EAKGD+  A+  + AAV +PY S+SGDYM  +A VH + RGW
Sbjct:   37 MAKFTQGDVDGSIADFDAVIAAAPGRAPYMWQRGLSLYYAERLREGSAQFRRDVAVNPNDTEEAVWAFLCEARDKDIGFEKAREDLLVVGRDPRAYMRAAYALFAGTGDEDSLR-----AVAANGGA---AEDFYTWLYLGLYREAKGDENGAKAAVLAAVATPYGSRSGDYMAALAEVHAKRRGW 214

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1422.3277.1 vs. uniprot
Match: A0A3B5Y5A5_WHEAT (Uncharacterized protein n=14 Tax=Triticeae TaxID=147389 RepID=A0A3B5Y5A5_WHEAT)

HSP 1 Score: 186 bits (472), Expect = 7.300e-56
Identity = 95/186 (51.08%), Postives = 126/186 (67.74%), Query Frame = 0

Query:    1 MERFRRGEVAGSVSDFDRAISLQPRLEAYLWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEVSLGSNGVAESGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPY-SKSGDYMCDVARVHQQARGW 185
            M+ F++G+VAGSV++FDRAI L PR +AYLWQRG+SLYY D+FEE + QFR DVA NPNDTEE+IW F+CE+++   G   A++R +++  +RRP MR AY+LFK       LA     S         G   FYA+LY GLY E++ D  LA+ +I AA ++PY S+SGDYM  +A VH Q R W
Sbjct:   85 MQLFQQGDVAGSVAEFDRAIELDPRQKAYLWQRGLSLYYLDRFEEAAEQFRLDVAANPNDTEESIWCFLCEAQL--YGVEEARKRFLEVGLDRRPVMREAYALFKDGGDPEKLASNFSTS--------PGGELFYASLYAGLYYESQKDADLAKSHIVAACKTPYGSRSGDYMASLAVVHCQCRNW 260

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1422.3277.1 vs. uniprot
Match: A0A7S2B9N6_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9N6_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.640e-55
Identity = 100/188 (53.19%), Postives = 126/188 (67.02%), Query Frame = 0

Query:    1 MERFRRGEVAGSVSDFDRAISLQPRLEAYLWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEVSLGSNGVAESGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSG---DYMCDVARVHQQARGW 185
            M+ FR+G+VAGS+  FD AI+   R   YLWQRG+SLYYA +FEEG+ QFR+DVA NPNDTEEAIWTF+CE++  + GF  A+++++K+  + RP MR    LF GDASE DLA     + G    AE     FYA LYLGLY+EAKGD V A+ YI  AV S Y K     DYM  ++ VH + RGW
Sbjct:   77 MQAFRKGDVAGSLEQFDAAIAADERYTLYLWQRGLSLYYAGKFEEGAVQFRRDVAANPNDTEEAIWTFLCEAQ--TNGFEAARKQMLKVGKDSRPIMRMVNELFLGDASEEDLATAGHKA-GPGSRAE-----FYALLYLGLYNEAKGDAVHAKGYIQQAVSSAYGKGNPDPDYMYSLSVVHARERGW 256

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1422.3277.1 vs. uniprot
Match: A0A7S0D7J5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D7J5_MICPS)

HSP 1 Score: 185 bits (470), Expect = 2.070e-55
Identity = 94/186 (50.54%), Postives = 126/186 (67.74%), Query Frame = 0

Query:    1 MERFRRGEVAGSVSDFDRAISLQPRLEAYLWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEVSLGSNGVAESGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPY-SKSGDYMCDVARVHQQARGW 185
            M +F +G+V GS++DFD  I+  P    Y+WQRG+SLYYA++  EGS QFR+DVA+NPNDTEEA+W F+CE+R   +GF  A++ L+ +  + R YMRAAY+LF G   E  L      ++ +NG A   A  FY  LYLGLY EAKGD+  A+  + AAV +PY S+SGDYM  +A VH + RGW
Sbjct:   97 MAKFTQGDVDGSIADFDAVIAAAPGRAPYMWQRGLSLYYAERLREGSAQFRRDVAVNPNDTEEAVWAFLCEARDKDIGFEKAREDLLVVGRDPRAYMRAAYALFAGTGDEDSLR-----AVAANGGA---AEDFYTWLYLGLYREAKGDENGAKAAVLAAVATPYGSRSGDYMAALAEVHAKRRGW 274

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1422.3277.1 vs. uniprot
Match: W7U3Q5_9STRA (Tetratricopeptide TPR2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3Q5_9STRA)

HSP 1 Score: 181 bits (460), Expect = 4.730e-54
Identity = 97/187 (51.87%), Postives = 125/187 (66.84%), Query Frame = 0

Query:    1 MERFRRGEVAGSVSDFDRAISLQ-PRLEAYLWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEVSLGSNGVAESGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSG-DYMCDVARVHQQARGW 185
            ME FRRG+V GS+  FD A+ L   +LE YLWQRG+SLYYA ++ EG+ QFRKDVA+NP DTEEAIW F+CE+++   GF  A+++++ +  + RPYMR AY LFKG  SE DLAK+        G   S    FYA LYLGLY+EA+ +   AR YI A+V +PY  +  DYM  +ARVH   R W
Sbjct:   87 MELFRRGDVEGSIMYFDEALLLGGAQLEPYLWQRGLSLYYAGRYREGAEQFRKDVAVNPADTEEAIWAFLCEAQVD--GFEEARRKMLIVQTDPRPYMRRAYELFKGTCSEEDLAKE--------GANLSSPAAFYALLYLGLYAEARDEADKARNYIHASVATPYGNANRDYMAGLARVHLIIRKW 263

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1422.3277.1 vs. uniprot
Match: A0A0Q3G0Y2_BRADI (Uncharacterized protein n=4 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3G0Y2_BRADI)

HSP 1 Score: 181 bits (459), Expect = 6.890e-54
Identity = 94/186 (50.54%), Postives = 127/186 (68.28%), Query Frame = 0

Query:    1 MERFRRGEVAGSVSDFDRAISLQPRLEAYLWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEVSLGSNGVAESGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPY-SKSGDYMCDVARVHQQARGW 185
            M+ F++G+VAGSV++FDRAI L PR +AYLWQRG+SLYY D+FEEG+ QFR DVA NPNDTEE+IW F+CE+++   G   A++R +++  + RP MRAAY++FK       LA        SN  + S    FYA+LY GLY E++ +   A+ +I AA +S Y S+SGDYM  +A VH Q R W
Sbjct:   83 MQLFKQGDVAGSVAEFDRAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAANPNDTEESIWCFLCEAQL--YGVEEARKRFLEVGLDGRPVMRAAYAMFKDGGDPEKLA--------SNFSSSSDGELFYASLYAGLYHESQKNADSAKSHIVAACKSRYGSRSGDYMASLALVHCQCRNW 258

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1422.3277.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1422.3277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LR87_ECTSI	2.810e-126	97.30	Binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
A0A6H5L4Y5_9PHAE	5.920e-126	97.30	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S1JEY7_9EUGL	1.140e-69	56.22	Hypothetical protein n=1 Tax=Eutreptiella gymnasti...	[more]
A0A835ZJI4_9STRA	3.650e-67	57.30	Binding protein n=1 Tax=Tribonema minus TaxID=3033...	[more]
A0A7S0D5P5_MICPS	3.450e-56	50.54	Hypothetical protein n=1 Tax=Micromonas pusilla Ta...	[more]
A0A3B5Y5A5_WHEAT	7.300e-56	51.08	Uncharacterized protein n=14 Tax=Triticeae TaxID=1...	[more]
A0A7S2B9N6_9STRA	1.640e-55	53.19	Hypothetical protein n=2 Tax=Florenciella parvula ...	[more]
A0A7S0D7J5_MICPS	2.070e-55	50.54	Hypothetical protein n=1 Tax=Micromonas pusilla Ta...	[more]
W7U3Q5_9STRA	4.730e-54	51.87	Tetratricopeptide TPR2 n=1 Tax=Nannochloropsis gad...	[more]
A0A0Q3G0Y2_BRADI	6.890e-54	50.54	Uncharacterized protein n=4 Tax=Brachypodium dista...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 2..183 e-value: 1.0E-19 score: 73.2
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 5..162
None	No IPR available	PANTHER	PTHR47908	FAMILY NOT NAMED	coord: 1..185
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 1..60 score: 11.72

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1422	contig	Ecto-sp13_S_contig1422:46..4468 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1422.3277.1	mRNA_Ecto-sp13_S_contig1422.3277.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1422 40..6226 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1422.3277.1 ID=prot_Ecto-sp13_S_contig1422.3277.1|Name=mRNA_Ecto-sp13_S_contig1422.3277.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=186bp
MERFRRGEVAGSVSDFDRAISLQPRLEAYLWQRGISLYYADQFEEGSRQF
RKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAA
YSLFKGDASESDLAKQMEVSLGSNGVAESGAPYFYANLYLGLYSEAKGDD
VLARKYISAAVRSPYSKSGDYMCDVARVHQQARGW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom