prot_Ecto-sp13_S_contig14217.3275.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14217.3275.1
Unique Nameprot_Ecto-sp13_S_contig14217.3275.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length181
Homology
BLAST of mRNA_Ecto-sp13_S_contig14217.3275.1 vs. uniprot
Match: D8LTS9_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS9_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 1.630e-77
Identity = 123/129 (95.35%), Postives = 125/129 (96.90%), Query Frame = 0
Query:    1 QVFKFSFYVIFFGVMFSLYGVPPLNLIRDVYMSFERLQRRLQAFYSRYRQLANTMDERFPDATEEELAECEHTCIICRDTMDAGKKLPCGHIFHFQCLRMWLQQQQACPTCRANIPTHGTAAAATAAAE 129
            +VFKFSFYVIFFGVMFSLYGVPPLNLIRDVYMSF+RLQRRLQAFY RYRQLANTMDERFPDATEEELAECEHTCIICRDTMDAGKKLPCGHIFHFQCLRMWLQQQQACPTCRANIP H T AAATAAAE
Sbjct:  219 EVFKFSFYVIFFGVMFSLYGVPPLNLIRDVYMSFDRLQRRLQAFY-RYRQLANTMDERFPDATEEELAECEHTCIICRDTMDAGKKLPCGHIFHFQCLRMWLQQQQACPTCRANIPAHVTVAAATAAAE 346          
BLAST of mRNA_Ecto-sp13_S_contig14217.3275.1 vs. uniprot
Match: A0A7S4DEQ8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEQ8_HETAK)

HSP 1 Score: 163 bits (413), Expect = 4.600e-48
Identity = 75/116 (64.66%), Postives = 97/116 (83.62%), Query Frame = 0
Query:    1 QVFKFSFYVIFFGVMFSLYGVPPLNLIRDVYMSFERLQRRLQAFYSRYRQLANTMDERFPDATEEELAECEHTCIICRDTMDAGKKLPCGHIFHFQCLRMWLQQQQACPTCRANIP 116
            +V +F FY++FF ++F+ YGVP L+L+RD++  + +L++RL+A Y +YR L   M+ERFPDAT E+L ECE+TCIICRD MDAGK LPCGHIFHFQCLRMWLQ QQ+CPTCRA+IP
Sbjct:   62 EVVRFGFYLVFFALVFTYYGVP-LHLVRDLWGCYSKLRKRLEA-YRKYRALTANMNERFPDATPEQLEECENTCIICRDHMDAGKSLPCGHIFHFQCLRMWLQHQQSCPTCRADIP 175          
BLAST of mRNA_Ecto-sp13_S_contig14217.3275.1 vs. uniprot
Match: A0A7S2GDQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GDQ5_9STRA)

HSP 1 Score: 158 bits (399), Expect = 2.570e-45
Identity = 73/116 (62.93%), Postives = 97/116 (83.62%), Query Frame = 0
Query:    1 QVFKFSFYVIFFGVMFSLYGVPPLNLIRDVYMSFERLQRRLQAFYSRYRQLANTMDERFPDATEEELAECEHTCIICRDTMDAGKKLPCGHIFHFQCLRMWLQQQQACPTCRANIP 116
            ++ +F  Y+IFF ++F+ YG+P L++IR++++S++ L+RRL A Y R+R+L   M++RFPDATEEEL  CEHTCIICRD M++GKKL CGHIFHFQCLR+WLQQQQ CPTCRA IP
Sbjct:   96 EMVRFIAYLIFFTIIFTYYGMP-LHIIRELWVSYQNLRRRLVA-YQRFRKLVVNMNDRFPDATEEELVTCEHTCIICRDHMESGKKLMCGHIFHFQCLRLWLQQQQTCPTCRAEIP 209          
BLAST of mRNA_Ecto-sp13_S_contig14217.3275.1 vs. uniprot
Match: A0A7S1BWC3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BWC3_9STRA)

HSP 1 Score: 165 bits (418), Expect = 2.860e-44
Identity = 82/126 (65.08%), Postives = 95/126 (75.40%), Query Frame = 0
Query:    4 KFSFYVIFFGVMFSLYGVPPLNLIRDVYMSFERLQRRLQAFYSRYRQLANTMDERFPDATEEELAECEHTCIICRDTMDAGKKLPCGHIFHFQCLRMWLQQQQACPTCRANIPTHGTAAAATAAAE 129
            +F FYVIFF ++F  YG+P LNL RDV+MSF  L+++L AF  RYR+L   M+ERFPDATEEEL EC  TCIICRD M  GKKLPCGHIFHF CLR WLQQQQ+CPTCR  IPT   A    +AA+
Sbjct:  427 RFLFYVIFFAIVFMYYGMP-LNLFRDVWMSFSSLRKKLAAF-RRYRRLTANMNERFPDATEEELEECNRTCIICRDQMQTGKKLPCGHIFHFYCLRQWLQQQQSCPTCRTEIPTEMPAPGPRSAAQ 550          
BLAST of mRNA_Ecto-sp13_S_contig14217.3275.1 vs. uniprot
Match: A0A4D9CLU7_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLU7_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.430e-40
Identity = 74/121 (61.16%), Postives = 96/121 (79.34%), Query Frame = 0
Query:    1 QVFKFSFYVIFFGVMFSLYGVPPLNLIRDVYMSFERLQRRLQAFYSRYRQLANTMDERFPDATEEELAECEHTCIICRDTMDAG---KKLPCGHIFHFQCLRMWLQQQQACPTCRANIPTH 118
            +V +F  YV+FF ++F+ YG+P L+++RD++MS+  L+RRL  F ++YR L   M+ERFPDAT EEL  CEHTCIICRD M+AG   KKLPC HIFH  CLR+WLQQQQ+CPTCRA+IPT+
Sbjct:  219 EVVRFLSYVVFFSIIFTYYGMP-LHIVRDLWMSYVNLKRRLVIF-NKYRHLTANMNERFPDATSEELIGCEHTCIICRDLMEAGPGAKKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTN 337          
BLAST of mRNA_Ecto-sp13_S_contig14217.3275.1 vs. uniprot
Match: A0A6T8HG76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8HG76_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.960e-39
Identity = 68/106 (64.15%), Postives = 82/106 (77.36%), Query Frame = 0
Query:   23 PLNLIRDVYMSFERLQRRLQAFYSRYRQLANTMDERFPDATEEELAECEHTCIICRDTMDAGKKLPCGHIFHFQCLRMWLQQQQACPTCRANIPTHGTAAAATAAA 128
            P+N+ R+V+MS+  L+RRL AF  +YR+L   M+ERF DATEEEL  C  TCIICR+TMD GKKL CGH+FHF CLR WLQQQQ+CPTCR +IPT  +AA   AAA
Sbjct:    2 PINIFREVWMSYTNLRRRLAAFV-KYRRLTYNMNERFADATEEELEGCGRTCIICRETMDQGKKLECGHVFHFYCLREWLQQQQSCPTCRCDIPTDSSAARRNAAA 106          
BLAST of mRNA_Ecto-sp13_S_contig14217.3275.1 vs. uniprot
Match: A0A8J2SMG0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMG0_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.060e-38
Identity = 68/121 (56.20%), Postives = 93/121 (76.86%), Query Frame = 0
Query:    1 QVFKFSFYVIFFGVMFSLYGVPPLNLIRDVYMSFERLQRRLQAFYSRYRQLANTMDERFPDATEEELAECEHTCIICRDTMDAGKKLPCGHIFHFQCLRMWLQQQQACPTCRANIPTHGTA 121
            +V +F+ YV+FF ++F+ YGVP L+++R+++ S+ +L++RLQAF  +YR L   MDERFP ATEEE+ E    CIICRD M  G++LPCGH+FHF CLR+WLQQQQ+CPTCR +IP    A
Sbjct:  220 EVLRFAAYVVFFSIVFAYYGVP-LHIVRELWASYVQLRQRLQAF-KKYRALTANMDERFPPATEEEIREAGGICIICRDDMSEGRRLPCGHVFHFACLRLWLQQQQSCPTCRQDIPVEAPA 338          
BLAST of mRNA_Ecto-sp13_S_contig14217.3275.1 vs. uniprot
Match: A0A7S2SCZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCZ9_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.930e-38
Identity = 68/116 (58.62%), Postives = 89/116 (76.72%), Query Frame = 0
Query:    1 QVFKFSFYVIFFGVMFSLYGVPPLNLIRDVYMSFERLQRRLQAFYSRYRQLANTMDERFPDATEEELAECEHTCIICRDTMDAGKKLPCGHIFHFQCLRMWLQQQQACPTCRANIP 116
            +  +F  +++FF ++F+ YG+P  N+IR++Y S+  L++RL  F + YR+L   ++ERFPDATE+EL  CEHTCIICRD M  GKKLPCGHIFH  CLR+WLQQQQ CPTCRA IP
Sbjct:  241 EALRFMLFMVFFMIVFTYYGMP-FNIIRELYGSYNNLRQRLTQFRN-YRKLVVNLNERFPDATEDELEACEHTCIICRDHMAEGKKLPCGHIFHVDCLRLWLQQQQTCPTCRAPIP 354          
BLAST of mRNA_Ecto-sp13_S_contig14217.3275.1 vs. uniprot
Match: A0A6G0XPR6_9STRA (RING-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPR6_9STRA)

HSP 1 Score: 139 bits (349), Expect = 6.410e-35
Identity = 66/118 (55.93%), Postives = 91/118 (77.12%), Query Frame = 0
Query:    1 QVFKFSFYVIFFGVMFSLYGVPPLNLIRDVYMSFERLQRRLQAFYSRYRQLANTMDERFPDATEEELAECEHTCIICRD--TMDAGKKLPCGHIFHFQCLRMWLQQQQACPTCRANIP 116
            +V K   Y++FF ++F+ YG+P L+L+RD++MS + LQRR+  ++ RYR++   M+ERFP+ TEEE+ E +  CIICR+  T+DA KKLPC HIFH  CLRMWLQ+QQ CPTCR+NIP
Sbjct:  219 EVVKLIVYLVFFMIIFTYYGMP-LHLLRDLWMSIKSLQRRIVTYF-RYRRITANMNERFPNPTEEEMNETDRICIICREEMTLDASKKLPCTHIFHLNCLRMWLQRQQTCPTCRSNIP 334          
BLAST of mRNA_Ecto-sp13_S_contig14217.3275.1 vs. uniprot
Match: A0A3M6VFB8_9STRA (RING-type domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFB8_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.720e-34
Identity = 66/119 (55.46%), Postives = 92/119 (77.31%), Query Frame = 0
Query:    1 QVFKFSFYVIFFGVMFSLYGVPPLNLIRDVYMSFERLQRRLQAFYSRYRQLANTMDERFPDATEEELAECEHTCIICRDTM--DAGKKLPCGHIFHFQCLRMWLQQQQACPTCRANIPT 117
            ++ K   Y+IFF ++F+ YG+P L+++RD+++S + LQRR+ A Y RYR++   ++ERFP+ TEEEL E + TCIICR+ M  DA KKLPC HIFH  CL+MW+Q+QQ CPTCR+NIPT
Sbjct:  195 EITKLVVYLIFFMLIFTYYGMP-LHIVRDLWVSIKNLQRRI-ASYFRYRKITANLNERFPNPTEEELQETDRTCIICREEMIPDACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSNIPT 311          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14217.3275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTS9_ECTSI1.630e-7795.35RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S4DEQ8_HETAK4.600e-4864.66Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2GDQ5_9STRA2.570e-4562.93Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S1BWC3_9STRA2.860e-4465.08Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A4D9CLU7_9STRA1.430e-4061.16RING-type domain-containing protein n=2 Tax=Monodo... [more]
A0A6T8HG76_9STRA2.960e-3964.15Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A8J2SMG0_9STRA1.060e-3856.20Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2SCZ9_9STRA3.930e-3858.62Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6G0XPR6_9STRA6.410e-3555.93RING-type domain-containing protein n=1 Tax=Aphano... [more]
A0A3M6VFB8_9STRA1.720e-3455.46RING-type domain-containing protein n=2 Tax=Perono... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 74..111
e-value: 4.4E-7
score: 39.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 73..112
e-value: 2.8E-11
score: 43.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 74..112
score: 12.725
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 46..123
e-value: 1.4E-22
score: 80.8
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 3..148
NoneNo IPR availablePANTHERPTHR22763:SF169coord: 3..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 54..118
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14217contigEcto-sp13_S_contig14217:48..1618 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14217.3275.1mRNA_Ecto-sp13_S_contig14217.3275.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14217 48..1618 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14217.3275.1 ID=prot_Ecto-sp13_S_contig14217.3275.1|Name=mRNA_Ecto-sp13_S_contig14217.3275.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=181bp
QVFKFSFYVIFFGVMFSLYGVPPLNLIRDVYMSFERLQRRLQAFYSRYRQ
LANTMDERFPDATEEELAECEHTCIICRDTMDAGKKLPCGHIFHFQCLRM
WLQQQQACPTCRANIPTHGTAAAATAAAERAAAAAVAAQQVAAAGGVAGV
AAPGAGAAPAAPAAPAAAAAAAVPVGAAAAP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD