prot_Ecto-sp13_S_contig14213.3272.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14213.3272.1
Unique Nameprot_Ecto-sp13_S_contig14213.3272.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length213
Homology
BLAST of mRNA_Ecto-sp13_S_contig14213.3272.1 vs. uniprot
Match: D7FV81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV81_ECTSI)

HSP 1 Score: 414 bits (1064), Expect = 6.420e-144
Identity = 207/213 (97.18%), Postives = 208/213 (97.65%), Query Frame = 0
Query:    1 MPRGGGGAGSSSGSKGPAPLGKQDACKEAQTAMRAQVIGPFENHGQCKLSMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGGGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVLYT 213
            MPRGGGGAGSSSGSKG APLGKQDA  EAQTAMRAQVIGPFENHGQCKLSMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNG GGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKV+ T
Sbjct:   85 MPRGGGGAGSSSGSKGAAPLGKQDAFNEAQTAMRAQVIGPFENHGQCKLSMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLT 297          
BLAST of mRNA_Ecto-sp13_S_contig14213.3272.1 vs. uniprot
Match: A0A2P6VMN0_9CHLO (TATA-box-binding 2 n=2 Tax=Chlorella clade TaxID=2511126 RepID=A0A2P6VMN0_9CHLO)

HSP 1 Score: 171 bits (432), Expect = 8.930e-50
Identity = 88/161 (54.66%), Postives = 116/161 (72.05%), Query Frame = 0
Query:   53 NVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGGGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVLYT 213
            NV AT +++C +DLK + + ARNAEYNPKRF+A I+R+    EPK+TAL+F +GK+V TG++S A    A + +A+IL KL       S+ ++F   ++ ++QNMV + DV FPIRLEGL AS    FC+YEPELFPGLIYRM DPKI  LIFVSGKV+ T
Sbjct:   32 NVVATVNLECKLDLKNIALHARNAEYNPKRFAAVIMRI---REPKSTALIFHSGKMVCTGTKSEAEARTASRKYAKILQKL-------SYSVSF---KEFKIQNMVGSCDVKFPIRLEGL-ASTHAMFCSYEPELFPGLIYRMADPKIVLLIFVSGKVVLT 178          
BLAST of mRNA_Ecto-sp13_S_contig14213.3272.1 vs. uniprot
Match: A0A1D2AC59_AUXPR (Uncharacterized protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AC59_AUXPR)

HSP 1 Score: 170 bits (431), Expect = 1.120e-49
Identity = 89/161 (55.28%), Postives = 116/161 (72.05%), Query Frame = 0
Query:   53 NVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGGGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVLYT 213
            NV AT +++C +DLK + +RARNAEYNPKRF+A I+R+    EPK+TAL+F +GK+V TG++S      A + +ARIL KL+N        + F   ++ ++QNMV + DV FPIRLEGL AS+   FC+YEPELFPGLIYRM DPKI  LIFVSGKV+ T
Sbjct:   28 NVVATVNLECKLDLKDIALRARNAEYNPKRFAAVIMRI---REPKSTALIFASGKMVCTGAKSEQESRLAARKYARILQKLEN-------PVIF---KEFKIQNMVGSCDVRFPIRLEGL-ASSHSVFCSYEPELFPGLIYRMVDPKIVLLIFVSGKVVLT 174          
BLAST of mRNA_Ecto-sp13_S_contig14213.3272.1 vs. uniprot
Match: A0A1Y1HVM1_KLENI (TATA-box binding protein 1/2 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HVM1_KLENI)

HSP 1 Score: 167 bits (424), Expect = 1.760e-48
Identity = 90/164 (54.88%), Postives = 118/164 (71.95%), Query Frame = 0
Query:   50 SMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGGGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVLYT 213
            ++ N+ ATA+M C +DLK + M+ARNAEYNPKRF+A IIR+    EPK TAL+F +GK+V TG++S  +   A + +ARI+ KL    G P   + F   +D ++QN+VA+ DV FPIRLEGL  ++Q  F NYEPELFPGLIYRM+ PKI  LIFVSGKV+ T
Sbjct:   30 TLQNIVATANMGCQLDLKAIAMQARNAEYNPKRFAAVIIRI---REPKTTALIFASGKMVCTGAKSEENARTAARKYARIVQKL----GFP---VTF---KDFKIQNIVASCDVKFPIRLEGLAYAHQ-MFSNYEPELFPGLIYRMRSPKIVLLIFVSGKVVLT 179          
BLAST of mRNA_Ecto-sp13_S_contig14213.3272.1 vs. uniprot
Match: A0A6G3MIS8_HENSL (TATA-box-binding protein (Trinotate prediction) n=1 Tax=Henneguya salminicola TaxID=69463 RepID=A0A6G3MIS8_HENSL)

HSP 1 Score: 166 bits (421), Expect = 2.770e-48
Identity = 86/174 (49.43%), Postives = 119/174 (68.39%), Query Frame = 0
Query:   40 PFENHGQCKLSMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGGGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVLYT 213
            P E+    +  + N+ +T D+ C +DL+T+ + ARNAEYNP+RF+A +IR+    EP+ TALVF +GK+V+TGSR+      A + +ARI+ KL    G P+   NF      R+QN+VA+ DV FPIRLEG++  + G FC+YEPELFPGLIYRM  P++  LIFVSGKV+ T
Sbjct:   34 PAEDIYHVEPHIQNIVSTIDLSCKVDLRTIALHARNAEYNPRRFAAVVIRI---REPRTTALVFSSGKLVITGSRTEHEARLAARKYARIVQKL----GFPAIFSNF------RIQNIVASCDVNFPIRLEGILIEH-GQFCSYEPELFPGLIYRMVKPRVVLLIFVSGKVVLT 193          
BLAST of mRNA_Ecto-sp13_S_contig14213.3272.1 vs. uniprot
Match: A0A2G2YW92_CAPAN (TATA-box-binding protein n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G2YW92_CAPAN)

HSP 1 Score: 165 bits (418), Expect = 3.010e-48
Identity = 82/164 (50.00%), Postives = 116/164 (70.73%), Query Frame = 0
Query:   50 SMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGGGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVLYT 213
            ++ N+ +T ++ C +DLK + ++A+NAEYNPKRF A I+R+    EPK TAL+F TGKVVVTG+++     YA + +ARI+ K+     G    + F   +D ++QN+VA+ DVGFPIRLEGL  ++ G F +YEPE+FPGLIYRMK PKI  L+F SGK++ T
Sbjct:   12 TLQNIASTVNLDCKLDLKGIALQAQNAEYNPKRFPAVIMRV---KEPKTTALIFATGKVVVTGAKNEGDAKYAARKYARIVQKI-----GCHLGVKF---KDFKIQNIVASCDVGFPIRLEGLALAH-GAFSSYEPEIFPGLIYRMKQPKIVMLVFTSGKIVIT 163          
BLAST of mRNA_Ecto-sp13_S_contig14213.3272.1 vs. uniprot
Match: UPI001CB922F7 (TATA-box-binding protein-like isoform X1 n=2 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB922F7)

HSP 1 Score: 166 bits (419), Expect = 3.060e-48
Identity = 83/164 (50.61%), Postives = 116/164 (70.73%), Query Frame = 0
Query:   50 SMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGGGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVLYT 213
            ++ N+ +T +++C +DLK++ ++ARNAEYNPKRF+A I+R+    EPK TAL+F +GK+V TG++S     +A + +ARI+ KL N              +D ++QN+VA+ DV FPIRLEGL  S+ G F +YEPELFPGLIYRMK PKI  LIFVSGK++ T
Sbjct:   25 TLQNIVSTVNLECKLDLKSIALQARNAEYNPKRFAAVIMRI---REPKTTALIFASGKMVCTGAKSEEQSRHAARKYARIIQKLGNAA----------KFKDFKIQNIVASCDVKFPIRLEGLAYSH-GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT 174          
BLAST of mRNA_Ecto-sp13_S_contig14213.3272.1 vs. uniprot
Match: A0A0L0HKX1_SPIPD (TATA-box-binding protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HKX1_SPIPD)

HSP 1 Score: 165 bits (418), Expect = 4.200e-48
Identity = 87/164 (53.05%), Postives = 113/164 (68.90%), Query Frame = 0
Query:   50 SMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGGGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVLYT 213
            ++ N+ AT ++ C +DLKT+ + ARNAEYNPKRF+A I+R+    EPK TAL+F +GK+VVTG++S      A + +ARI+ KL     G   K       D ++QN+V + DV FPIRLEGL A N G FC+YEPELFPGLIYRM  PKI  LIFVSGK++ T
Sbjct:   27 TLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRI---REPKTTALIFASGKMVVTGAKSEEMSKLAARKYARIIQKL-----GFQAKFT-----DFKIQNIVGSCDVKFPIRLEGL-ALNHGSFCSYEPELFPGLIYRMLRPKIVLLIFVSGKIVLT 176          
BLAST of mRNA_Ecto-sp13_S_contig14213.3272.1 vs. uniprot
Match: A0A7R9TBJ0_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TBJ0_9VIRI)

HSP 1 Score: 167 bits (422), Expect = 6.760e-48
Identity = 91/186 (48.92%), Postives = 122/186 (65.59%), Query Frame = 0
Query:   28 EAQTAMRAQVIGPFENHGQCKLSMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGGGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVLYT 213
            +A TA  A  +   ++       + N+ AT +M C +DL  + + ARNAEYNPKRFSA I+R+   +EPK TAL+F +GK+VVTG++S A    + K +ARI+ KL         K+NF   +D ++QN+V + DV FPIRLEG+  S+   F NYEPELFPGLIYRM+ PKI  LIFVSGKV+ T
Sbjct:   67 KAPTAAAAPAVDLTKHPSGIVPKLQNLVATVNMDCKLDLHKIALTARNAEYNPKRFSAVILRI---HEPKTTALIFHSGKMVVTGAKSEADARTSAKKYARIVQKL-------GFKVNF---KDFKIQNIVGSCDVKFPIRLEGISLSHSH-FSNYEPELFPGLIYRMRSPKIVLLIFVSGKVVLT 238          
BLAST of mRNA_Ecto-sp13_S_contig14213.3272.1 vs. uniprot
Match: A0A165ZVS9_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A165ZVS9_DAUCS)

HSP 1 Score: 164 bits (415), Expect = 7.550e-48
Identity = 79/173 (45.66%), Postives = 118/173 (68.21%), Query Frame = 0
Query:   41 FENHGQCKLSMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGGGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVLYT 213
             ++H     ++ N+ +T ++ C +DLK + + ARNAEYNPKRF+A I+R+    EPK TAL+F +GK+V+TG++S      A + FAR++ K+        + + F   R+ ++QNMV + D+GFPIRLEG ++ +   F +YEPELFPGL+YRMKDPKI  L+FVSGK++ T
Sbjct:    1 MDHHSGLVPTIQNIVSTVNLDCRLDLKRIALSARNAEYNPKRFAAVIMRI---KEPKTTALIFSSGKLVITGAKSEDKARLAARKFARVVEKI-------GYPVRF---REFKIQNMVGSCDLGFPIRLEG-ISIHHAAFSSYEPELFPGLVYRMKDPKIVLLVFVSGKIVIT 159          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14213.3272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV81_ECTSI6.420e-14497.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2P6VMN0_9CHLO8.930e-5054.66TATA-box-binding 2 n=2 Tax=Chlorella clade TaxID=2... [more]
A0A1D2AC59_AUXPR1.120e-4955.28Uncharacterized protein n=3 Tax=Auxenochlorella pr... [more]
A0A1Y1HVM1_KLENI1.760e-4854.88TATA-box binding protein 1/2 n=1 Tax=Klebsormidium... [more]
A0A6G3MIS8_HENSL2.770e-4849.43TATA-box-binding protein (Trinotate prediction) n=... [more]
A0A2G2YW92_CAPAN3.010e-4850.00TATA-box-binding protein n=4 Tax=Capsicum TaxID=40... [more]
UPI001CB922F73.060e-4850.61TATA-box-binding protein-like isoform X1 n=2 Tax=E... [more]
A0A0L0HKX1_SPIPD4.200e-4853.05TATA-box-binding protein n=2 Tax=Spizellomyces Tax... [more]
A0A7R9TBJ0_9VIRI6.760e-4848.92Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A165ZVS9_DAUCS7.550e-4845.66Uncharacterized protein n=1 Tax=Daucus carota subs... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000814TATA-box binding proteinPRINTSPR00686TIFACTORIIDcoord: 198..213
score: 59.32
coord: 51..66
score: 31.78
coord: 75..94
score: 54.47
IPR000814TATA-box binding proteinPFAMPF00352TBPcoord: 153..213
e-value: 4.5E-21
score: 74.6
coord: 50..132
e-value: 9.3E-26
score: 89.6
IPR000814TATA-box binding proteinPANTHERPTHR10126TATA-BOX BINDING PROTEINcoord: 48..213
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 56..154
e-value: 6.8E-54
score: 183.8
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 53..212
e-value: 6.8E-54
score: 183.8
NoneNo IPR availablePANTHERPTHR10126:SF6TATA BOX-BINDING PROTEIN-LIKE PROTEIN 2-RELATEDcoord: 48..213
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 46..134
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 151..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14213contigEcto-sp13_S_contig14213:2527..4469 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14213.3272.1mRNA_Ecto-sp13_S_contig14213.3272.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14213 663..4469 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14213.3272.1 ID=prot_Ecto-sp13_S_contig14213.3272.1|Name=mRNA_Ecto-sp13_S_contig14213.3272.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=213bp
MPRGGGGAGSSSGSKGPAPLGKQDACKEAQTAMRAQVIGPFENHGQCKLS
MVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATA
LVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGGGGPSHKINFDLER
DRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKI
CFLIFVSGKVLYT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000814TBP
IPR012295TBP_dom_sf