mRNA_Ecto-sp13_S_contig14211.3271.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14211.3271.1
Unique NamemRNA_Ecto-sp13_S_contig14211.3271.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14211.3271.1 vs. uniprot
Match: D7G7H6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7H6_ECTSI)

HSP 1 Score: 598 bits (1542), Expect = 1.450e-211
Identity = 330/404 (81.68%), Postives = 336/404 (83.17%), Query Frame = 1
Query:    1 MKLWHKAIRCRRRGSKCLEMESPRPRTPVQPVGNHNNSSIVWLVNELDGNTSRIGENQPDVNQEXXXXXXXTKVNPSRHFYGATGFVAEEQRRGGDNG-ARLLRKQELVRAGDKEEIQELRASLLQLRDDLRRNEEMAAARLKAIEDEKATLEVDLLAERAKTARQQKTMHFLRETNIEAQSLETELRDQVETLKIARGQHDEGQFQSKEEKVRSGLARLVEKDLRKQVAMLEQSTGQQANEIRVLLAQLQVLQRNGEPHIDSVLMVGSTQTANATLSALGDSHPDCTRLRADFLSGWRTLTGLAIERIFRITVPADVGETHASYVRSHGNVVQRFHGTSCRSTCNFIIDPKKASPCGLQACKLCNICLRGFKLGKASRRFGQGVYFSTKSAKANGYAQGTEKK 1209
            MKLWHKA R RRRGSKC E+ESP PR PVQ VGNHN+ SIVWLV+ELDGNTSRIGENQPDVNQE       TKV+PSRH YGA GFVAEEQRRGGDN   RLLRKQELVR                                     EKA LEV LLAERAKTARQQKTMHFLRETNIEAQSLETELRDQVETLKIA G H EG+FQ+KEEKVRSGLARLVEKDLRKQVA LEQSTGQQANEIRVLLAQLQVLQRNGEPHIDSVL VGSTQ ANATLSALGDSHPDC RLRADFLSGWRTLTGLAIERIFRITVPA VGETHA YVRSHGNVVQRFHGTSCRSTCNFIIDPKKASPCGLQACKLCNICLRGFKLGKASRRFGQGVYFSTK AKANGYAQGTEKK
Sbjct:    1 MKLWHKATRWRRRGSKCSELESPLPRAPVQSVGNHNSKSIVWLVSELDGNTSRIGENQPDVNQEEEEE---TKVDPSRHSYGAMGFVAEEQRRGGDNADERLLRKQELVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKAALEVALLAERAKTARQQKTMHFLRETNIEAQSLETELRDQVETLKIASG-HGEGRFQTKEEKVRSGLARLVEKDLRKQVATLEQSTGQQANEIRVLLAQLQVLQRNGEPHIDSVLTVGSTQGANATLSALGDSHPDCPRLRADFLSGWRTLTGLAIERIFRITVPAGVGETHAGYVRSHGNVVQRFHGTSCRSTCNFIIDPKKASPCGLQACKLCNICLRGFKLGKASRRFGQGVYFSTKPAKANGYAQGTEKK 400          
BLAST of mRNA_Ecto-sp13_S_contig14211.3271.1 vs. uniprot
Match: D7G7H4_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7H4_ECTSI)

HSP 1 Score: 404 bits (1038), Expect = 2.480e-135
Identity = 242/405 (59.75%), Postives = 283/405 (69.88%), Query Frame = 1
Query:    1 MKLWHKAIRCRRRGSKCLEMESPRPRTPVQPVGNHNNSSIVWLVNELDGNTSRIGENQPDVNQEXXXXXXXTKVNPSRHFYGATGFVAEEQRRGGDNG-ARLLRKQE-LVRAGDKEEIQELRASLLQLRDDLRRNEEMAAARLKAIEDEKATLEVDLLAERAKTARQQKTMHFLRETNIEAQSLETELRDQVETLKIARGQHDEGQFQSKEEKVRSGLARLVEKDLRKQVAMLEQSTGQQANEIRVLLAQLQVLQRNGEPHIDSVLMVGSTQTANATLSALGDSHPDCTRLRADFLSGWRTLTGLAIERIFRITVPADVGETHASYVRSHGNVVQRFHGTSCRSTCNFIIDPKKASPCGLQACKLCNICLRGFKLGKASRRFGQGVYFSTKSAKANGYAQGTEKK 1209
            MK  H+  R R R S   +  +  P  P Q       +     V  LDGN   +G+ +P+ +QE       TKV+   H YG    +AE+QR G DN   RLL KQE LVR  DKEEIQEL ASLLQL +D RR+EE+AAARLKA+E EKA LEV + AERAKTA QQKTMHFLR+ +IEAQS+ET+LR++++TLK  + Q   G   +KEEK+R GLARLVEKDLRK+VA+LEQS  QQ  EIR LL  LQVLQRNG  H D +L VG+ Q   ATLSAL D +PDCTRLR DFLS WR L GLAIERI RITVPAD+   H  Y RSH  VV RFHGTSC STCN ++DPKKASPCGLQ C +CNICL+GFKLGK S RFG+GVYFS+K  +AN YA  TEKK
Sbjct:    1 MKALHRVTRWRWRSSTSSKSNTS-PEEPEQ-------AKDALAVRSLDGNRPPVGQLEPNGHQEGEE----TKVDAPGHSYGPNQLIAEDQRHGEDNADERLLSKQEELVRNSDKEEIQELCASLLQLHNDRRRSEEIAAARLKAVEGEKAALEVAIQAERAKTAMQQKTMHFLRQISIEAQSVETQLRNELQTLKNEKSQGTNGHSDTKEEKMRRGLARLVEKDLRKRVAVLEQSQRQQVGEIRSLLTPLQVLQRNGGSHFDRILTVGNNQ--GATLSALYDGNPDCTRLRDDFLSAWR-LNGLAIERILRITVPADIRAKHDKYARSHRTVVGRFHGTSCGSTCNLVLDPKKASPCGLQLCNVCNICLQGFKLGKRSTRFGRGVYFSSKPGRANAYAPATEKK 390          
BLAST of mRNA_Ecto-sp13_S_contig14211.3271.1 vs. uniprot
Match: A0A6H5JEL8_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL8_9PHAE)

HSP 1 Score: 370 bits (951), Expect = 1.650e-120
Identity = 242/454 (53.30%), Postives = 285/454 (62.78%), Query Frame = 1
Query:    1 MKLWHKAIRCRRRGSKCLEMESPRPRTPVQ----PVGNHNNSSIVWLVNELDGNTSRIGENQPDVNQEXXXXXXXTKVNPSRHFYGATGFVAEEQRRGGD-NGARLLRKQELVRAGDKEEIQELRASLLQLRDDLRRNEEMAAARLKAIEDEKATLEVDLLAERAKTARQQKTMH----FLRETNIEAQSLETELRDQVETLKIARGQHDE-GQFQSKEEKVRSGLARLVEKDLRKQVAMLEQSTG------------------------------------------QQANEIRVLLAQLQVLQRNGEPHIDSVLMVGSTQTANATLSALGDSHPDCTRLRADFLSGWRTLTGLAIERIFRITVPADVGETHASYVRSHGNVVQRFHGTSCRSTCNFIIDPKKASPCGLQACKLCNICLRGFKLGKASRRFGQGVYFSTKSAKANGYAQGTEK 1206
            MK  HK     RR SK  + + P    P Q    PV   +N+ +     E   N SR G+     NQE       T V+ S   YGA  FV++E+ RG +    RLLRKQEL+R  D+EEIQ+LRA+LLQ + DL+RNE+MA ARLKA+EDEKA LEV L AERA TA QQ TM+     LRE  IEAQ LE+EL +QVE LK  + +  E GQ Q+K+EK+RSGLARLVEKDLR QVA LEQS                                            QQA+EIR LLAQ+Q LQR+ E HIDSV+  G TQ  NAT SALGD HPDC RL ADF   W     +AI  IFRITVPA V + H SYVRSHGNVVQRFHGTSCRS CNFI+DPKKA+PCGLQ C +CNICL+GFK+GK+S R+GQGVYFS ++ KAN YA G+EK
Sbjct:    1 MKTLHKLTLWSRRSSKSSKSKIPPSVEPAQADETPVQVAHNTILFVDGREGSNNFSRFGQTLAYRNQEEEEEK--TTVDSSHRAYGAKEFVSDEECRGEECPNVRLLRKQELLRKSDQEEIQKLRATLLQQKYDLQRNEKMALARLKAVEDEKAALEVALGAERANTAMQQITMNNMKNTLREKTIEAQLLESELGEQVEMLKKEKSKAAENGQRQTKQEKIRSGLARLVEKDLRTQVATLEQSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQQADEIRNLLAQVQDLQRSEERHIDSVVTFGRTQGFNATASALGDGHPDCPRLHADFYPFWEAPVEVAIVGIFRITVPAGVRDKHLSYVRSHGNVVQRFHGTSCRSACNFILDPKKAAPCGLQDCNVCNICLQGFKIGKSSTRYGQGVYFSKQATKANSYAGGSEK 452          
BLAST of mRNA_Ecto-sp13_S_contig14211.3271.1 vs. uniprot
Match: D7G7H5_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7H5_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 5.500e-110
Identity = 185/288 (64.24%), Postives = 224/288 (77.78%), Query Frame = 1
Query:  346 IQELRASLLQLRDDLRRNEEMAAARLKAIEDEKATLEVDLLAERAKTARQQKTMHFLRETNIEAQSLETELRDQVETLKIARGQHDEGQFQSKEEKVRSGLARLVEKDLRKQVAMLEQSTGQQANEIRVLLAQLQVLQRNGEPHIDSVLMVGSTQTANATLSALGDSHPDCTRLRADFLSGWRTLTGLAIERIFRITVPADVGETHASYVRSHGNVVQRFHGTSCRSTCNFIIDPKKASPCGLQACKLCNICLRGFKLGKASRRFGQGVYFSTKSAKANGYAQGTEKK 1209
            IQEL ASLL+L D+LRR+EEMAAARLKA+EDEKA LEV L  ERAKTA Q+KTMHFLR+TNI+AQS+E ELR+Q+ETL+  + +  +G   +KE+K+RSGLARLVE DL+KQVA L Q   +Q +EIR L  QLQ L+ N  P I  ++ V S+Q A+AT ++LG++HPDC+RLRADF  GW    G+AI R+FRITVPA V + H +Y R  GNVVQRFHGTSCRS CNFI+DPK A+PCG Q C LCNICL+GFKLGK S RFG GVYFS  + KA+ YA GTEKK
Sbjct:    2 IQELHASLLKLHDNLRRSEEMAAARLKAVEDEKAALEVALREERAKTAMQEKTMHFLRQTNIQAQSVEIELRNQMETLQ--KEKKSQGLSHTKEQKIRSGLARLVENDLQKQVATLAQLRREQVDEIRSLSIQLQGLEVNRVPLIGGLITVLSSQGASATFTSLGNAHPDCSRLRADFYPGWEAPGGVAIVRMFRITVPAGVRQKHLNYARRLGNVVQRFHGTSCRSACNFILDPKNAAPCGQQGCNLCNICLQGFKLGKTSTRFGPGVYFSKAATKASSYALGTEKK 287          
BLAST of mRNA_Ecto-sp13_S_contig14211.3271.1 vs. uniprot
Match: D7FLK2_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK2_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 4.120e-102
Identity = 191/333 (57.36%), Postives = 225/333 (67.57%), Query Frame = 1
Query:  352 ELRASLLQLRDDLRRNEEMAAARLKAIEDEKATLEVDLLAERAKTARQQKTMHF----LRETNIEAQSLETELRDQVETLKIARGQH-DEGQFQSKEEKVRSGLARLVEKDLRKQVAMLEQSTG------------------------------------------QQANEIRVLLAQLQVLQRNGEPHIDSVLMVGSTQTANATLSALGDSHPDCTRLRADFLSGWRTLTGLAIERIFRITVPADVGETHASYVRSHGNVVQRFHGTSCRSTCNFIIDPKKASPCGLQACKLCNICLRGFKLGKASRRFGQGVYFSTKSAKANGYAQGTEKK 1209
            ELRA+LLQ + DL R+E+MA  RLK +EDEKA LEV L AERA  A QQKT+++    LRE NIEAQ LE+EL +QVETLK  + +  ++GQ Q+KE+K+R+GLARLVEKDLRKQVA L+QS                                            QQA+EIR LL QLQ LQRN E HIDSV+  G TQ  NAT SALGD HPDC RL A F   W    G+A+  IFRITVPA V   H SYVRSHGNVVQ FHGTSCRS CNFI+DPKKA+PCGLQ C +CNICL+GFK+GK+S R+G+GVYFS ++ KAN YA G+EKK
Sbjct:   68 ELRATLLQWKYDLERSEKMAVDRLKVVEDEKAALEVALGAERANMAMQQKTINYMKNTLREKNIEAQLLESELGEQVETLKKEKSKAAEDGQRQTKEDKIRNGLARLVEKDLRKQVATLKQSIKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQQADEIRNLLVQLQDLQRNEEQHIDSVVTFGRTQGFNATASALGDGHPDCPRLHAKFYPRWEASVGVAVVGIFRITVPAGVRGKHLSYVRSHGNVVQCFHGTSCRSACNFILDPKKAAPCGLQDCNVCNICLQGFKIGKSSTRYGRGVYFSKQATKANSYAGGSEKK 400          
BLAST of mRNA_Ecto-sp13_S_contig14211.3271.1 vs. uniprot
Match: A0A6H5JJM5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM5_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 2.300e-55
Identity = 155/366 (42.35%), Postives = 185/366 (50.55%), Query Frame = 1
Query:  118 IVWLVNELDGNTSRIGENQPDVNQEXXXXXXXTKVNPSRHFYGATGFVAEEQRRGGDNGARLLRKQE-LVRAGDKEE-IQELRASLLQLRDDLRRNEEMAAARLKAIEDEKATLEVDLLAERAKTARQQKTMHFLRETNIEAQSLETELRDQVETLKIARGQHDEGQFQSKEEKVRSGLARLVEKDLRKQVAMLEQSTGQQANEIRVLLAQLQVLQRNGEPHIDSVLMVGSTQTANATLSALGDSHPDCTRLRADFLSGWRTLTGLAIERIFRITVPADVGETHASYVRSHGNVVQRFHGTSCRSTCNFIIDPKKASPCGLQACKLCNICLRGFKLGKASRRFGQGVYFSTKSAKANGYAQGTEKK 1209
            ++    EL G   R+G+ QPD N E       TKV+PSR  YG      E+         RLLRK E LVR G++EE I+ L  SLL+L D  RR+EEMAAARLKA+EDEKA  EV    E+AKT  Q+KTMHFLR TNI+AQS+E     +                        SGLA LVEK+LRKQVA L QS  QQA EIR L  QLQ L+ N  P I  ++ V S+Q A+AT   LG +HPDCTRLRADF  G                                                   + P             C+ICL+GFKLGK S RFG GVYFS  + KA+ YA GTE+K
Sbjct:   46 MILFAGELGGILPRVGQVQPDGNGEEEK----TKVDPSRQSYGPKESPGEDP-----VDERLLRKHEGLVRTGNEEEMIEGLHVSLLKLHDIPRRSEEMAAARLKAVEDEKAAFEVAKREEKAKTTMQEKTMHFLRRTNIQAQSVEMSCEIRW-----------------------SGLALLVEKNLRKQVATLTQSLSQQAGEIRSLSTQLQGLEVNKVPLIGGLITVLSSQGASATFIPLGIAHPDCTRLRADFYPG---------------------------------------------------LQP-------------CDICLQGFKLGKTSTRFGPGVYFSKSATKASSYALGTEEK 315          
BLAST of mRNA_Ecto-sp13_S_contig14211.3271.1 vs. uniprot
Match: A0A6H5JCZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCZ5_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 1.090e-45
Identity = 111/178 (62.36%), Postives = 126/178 (70.79%), Query Frame = 1
Query:  427 AIEDEKATLEVDLLAERAKTARQQKTMHFLRETNIEAQSLETELRDQVETLKIARGQHDE-GQFQSKEEKVRSGLARLVEKDLRKQVAMLEQSTGQQANEIRVLLAQLQVLQRNGEPHIDSVLMVGSTQTANATLSALGDSHPDCTRLRADFLSGWRTLTGLAIERIFRITVPADVGE 957
            A+ DEK  LEV L AERA TA QQKTM+ LRE +IEAQS+E ELRDQVE LK    Q  E G+ Q+KEEK+RSG+ARL+EKDLRKQVA LEQS  QQA+EI  LL Q  V Q+N EPHI SV   G  + +NAT SALGD HPDC RL ADF  GW    G+AI  IFRITV   + E
Sbjct:  710 AVADEKDALEVALGAERANTAMQQKTMYTLREESIEAQSVEVELRDQVEMLKEKMSQEAEIGRRQAKEEKIRSGVARLIEKDLRKQVATLEQSRMQQADEIGRLLTQ--VFQQNEEPHIGSVATFGRGKGSNATASALGDDHPDCPRLHADFYPGWEAPVGVAIVGIFRITVCTSLDE 885          
BLAST of mRNA_Ecto-sp13_S_contig14211.3271.1 vs. uniprot
Match: D8LS87_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.020e-24
Identity = 64/166 (38.55%), Postives = 96/166 (57.83%), Query Frame = 1
Query:  748 QVLQRNGEPHIDSVLMVGSTQTANATLSALGDSHPDCTRLRADFLSGW---RTLTGLAIERIFRITVPADVGETHASYVRSHGNVVQRFHGTSCRSTCNFIIDPKKASPCGLQACKLCNICLRGFKL-----GKASR-----RFGQGVYFSTKSAKANGYAQGTEK 1206
            Q L  NG+ +++ +   G+T T +  L  L  +HP    L   F++ W     + G+++E+I  + VPADV     +Y ++ GNV +RFHGTSC + CNF +D  + +PC  + CK+C+IC  GF L     G A R     R+G+G+YFS+ S KAN YA  +EK
Sbjct:  217 QTLGTNGDTYVERIFHRGTTGTTDFKLCVLSKAHPHYPSLIDQFVNKWVKPEPVGGISVEKILTVEVPADVRRKTKTYEKTVGNVRRRFHGTSCSTKCNFFVD-LRGNPCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEK 381          
BLAST of mRNA_Ecto-sp13_S_contig14211.3271.1 vs. uniprot
Match: D8LS86_ECTSI (PARP catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 1.090e-23
Identity = 62/161 (38.51%), Postives = 89/161 (55.28%), Query Frame = 1
Query:  763 NGEPHIDSVLMVGSTQTANATLSALGDSHPDCTRLRADFLSGWRTL---TGLAIERIFRITVPADVGETHASYVRSHGNVVQRFHGTSCRSTCNFIIDPKKASPCGLQACKLCNICLRGFKL----GKASRR------FGQGVYFSTKSAKANGYAQGTEK 1206
            N EP +D     G+T   +  LS L + HP+    +  F+  W      TG+++ RIF++ VP D+     + +   GNV +RFHGTSC + C F +D  +  PCG   CK+CNIC  GF+L    G  +RR      +G G+YFS+ S KAN YA+ +EK
Sbjct:  242 NPEPFVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKQQFMQKWEKPLVGTGVSVLRIFKVQVPKDIRRRTETCMGQVGNVQRRFHGTSCSNVCTFFVD-LRGGPCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEK 401          
BLAST of mRNA_Ecto-sp13_S_contig14211.3271.1 vs. uniprot
Match: A0A6H5JBF5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.110e-23
Identity = 62/155 (40.00%), Postives = 88/155 (56.77%), Query Frame = 1
Query:  787 VLMVGSTQTANATLSALGDSHPDCTRLRADFLSGW---RTLTGLAIERIFRITVPADVGETHASYVRSHGNVVQRFHGTSCRSTCNFIIDPKKA-SPCGLQACKLCNICLRGFKLGK----------ASRRFGQGVYFSTKSAKANGYAQGTEKK 1209
            VL VGS+++    L  L ++  + T LR  F + W   R   G++IER++ I V  ++ E H  Y    GN+ QRFHGTSC   CNF++DP+   +PCG  +C +CNIC  GFKLG              R+G+G+Y ++ S KAN YA  + KK
Sbjct:    7 VLPVGSSESV---LQMLEENSREYTALRGLFNARWMKPRPAKGVSIERVYSIQVSREMREKHERYKGMFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGVPLRYGEGIYLTSVSGKANDYASRSAKK 158          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14211.3271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7G7H6_ECTSI1.450e-21181.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G7H4_ECTSI2.480e-13559.75PARP catalytic domain-containing protein n=1 Tax=E... [more]
A0A6H5JEL8_9PHAE1.650e-12053.30PARP catalytic domain-containing protein n=1 Tax=E... [more]
D7G7H5_ECTSI5.500e-11064.24PARP catalytic domain-containing protein n=1 Tax=E... [more]
D7FLK2_ECTSI4.120e-10257.36PARP catalytic domain-containing protein n=1 Tax=E... [more]
A0A6H5JJM5_9PHAE2.300e-5542.35PARP catalytic domain-containing protein n=1 Tax=E... [more]
A0A6H5JCZ5_9PHAE1.090e-4562.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS87_ECTSI1.020e-2438.55PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LS86_ECTSI1.090e-2338.51PARP catalytic domain-containing protein n=2 Tax=E... [more]
A0A6H5JBF5_9PHAE1.110e-2340.00PARP catalytic domain-containing protein n=1 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14211contigEcto-sp13_S_contig14211:1659..4318 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score139.4
Seed ortholog evalue3.6e-30
Seed eggNOG ortholog2880.D8LS88
Model size1209
Hectar predicted targeting categoryother localisation
Exons4
EggNOG OGs28J37@1,2S14A@2759
Ec32 ortholog descriptionPoly(ADP-ribose) polymerase, catalytic domain
Ec32 orthologEc-02_000300.1
Cds size1209
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462759.7444644-CDS-Ecto-sp13_S_contig14211:1658..24081681462759.7444644-CDS-Ecto-sp13_S_contig14211:1658..2408Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14211 1659..2408 +
1681462759.7996037-CDS-Ecto-sp13_S_contig14211:3041..32271681462759.7996037-CDS-Ecto-sp13_S_contig14211:3041..3227Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14211 3042..3227 +
1681462759.8106995-CDS-Ecto-sp13_S_contig14211:3740..38571681462759.8106995-CDS-Ecto-sp13_S_contig14211:3740..3857Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14211 3741..3857 +
1681462759.8205385-CDS-Ecto-sp13_S_contig14211:4162..43181681462759.8205385-CDS-Ecto-sp13_S_contig14211:4162..4318Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14211 4163..4318 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14211.3271.1prot_Ecto-sp13_S_contig14211.3271.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14211 1659..4318 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14211.3271.1

>prot_Ecto-sp13_S_contig14211.3271.1 ID=prot_Ecto-sp13_S_contig14211.3271.1|Name=mRNA_Ecto-sp13_S_contig14211.3271.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=403bp
MKLWHKAIRCRRRGSKCLEMESPRPRTPVQPVGNHNNSSIVWLVNELDGN
TSRIGENQPDVNQEEEEEEEETKVNPSRHFYGATGFVAEEQRRGGDNGAR
LLRKQELVRAGDKEEIQELRASLLQLRDDLRRNEEMAAARLKAIEDEKAT
LEVDLLAERAKTARQQKTMHFLRETNIEAQSLETELRDQVETLKIARGQH
DEGQFQSKEEKVRSGLARLVEKDLRKQVAMLEQSTGQQANEIRVLLAQLQ
VLQRNGEPHIDSVLMVGSTQTANATLSALGDSHPDCTRLRADFLSGWRTL
TGLAIERIFRITVPADVGETHASYVRSHGNVVQRFHGTSCRSTCNFIIDP
KKASPCGLQACKLCNICLRGFKLGKASRRFGQGVYFSTKSAKANGYAQGT
EKK
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mRNA from alignment at Ecto-sp13_S_contig14211:1659..4318+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14211.3271.1 ID=mRNA_Ecto-sp13_S_contig14211.3271.1|Name=mRNA_Ecto-sp13_S_contig14211.3271.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2660bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14211:1659..4318+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGCTTTGGCACAAGGCGATCCGCTGCCGAAGGCGCGGCTCCAAATG CTTGGAGATGGAGTCTCCGCGACCGAGGACGCCGGTACAACCAGTTGGAA ACCACAACAACAGCAGCATCGTTTGGCTCGTAAACGAGCTTGACGGCAAT ACCTCGCGGATCGGCGAGAATCAACCCGATGTCAACCAAGAGGAGGAGGA GGAGGAGGAGGAGACAAAGGTTAATCCATCCCGACACTTCTACGGAGCCA CGGGGTTCGTTGCCGAAGAGCAGCGCCGGGGTGGGGACAATGGTGCGAGA CTGCTGAGAAAGCAAGAGTTGGTGCGCGCTGGCGATAAAGAGGAGATACA GGAGCTGCGTGCATCCTTGTTGCAGTTGCGCGATGACCTCCGTAGGAACG AGGAGATGGCCGCGGCCCGGTTGAAGGCCATTGAGGACGAAAAGGCTACC TTGGAGGTGGACTTACTAGCGGAGAGGGCGAAGACGGCGAGACAGCAGAA AACCATGCATTTCCTTCGGGAGACAAATATCGAGGCTCAGTCGCTGGAGA CCGAGCTGCGAGACCAGGTGGAGACGTTGAAGATAGCAAGGGGCCAACAT GACGAAGGGCAATTTCAATCGAAAGAGGAGAAGGTCAGGAGCGGGTTGGC ACGGCTGGTGGAAAAGGATTTGCGGAAGCAGGTGGCCATGCTCGAGCAGT CAACCGGGCAACAAGCGAACGAAATTCGAGTTCTCTTGGCTCAGCTGCAG GTGAAACTTTTACTGCGCATAGTAATACATATTTGTACGTACACGAATTC GTTTTTCAGCCAATGAGAGGTGCCCACCTTCGAAATCGCGGGCTTGGTCA TGCAATCTGTTACACACAGGTATTTAGTGGATTCAACAACCTCAGCATGT CTGCACCAGCAGACGTCGACAACGAAAATGCGAACTTGTGAAAATCTAGA TAGTATACCACGGAAATTGACCCGCGTCAATTGTTGGATCAGTATGAACA TATGAAGGTACTGGGTAGAGAGAACGGGACGGTTTTTAATGTGAAGACAA CAACAACAACAACTCGGCACGGCACAAACAGCCACAAGAGCCACGAGAAA GCAGTTTGTTTCGCGTTCGCGGAAGGTGAAGGAGCACCAATAGTTCCGTT GTCGCCTCGTATTTTCGTTGTCGATTTCGTGTATGACAAGTCTACTATAC TGAATGTTAATGGCGAAAAAAAAACGCCTTCGGAGTGCAGGTCTGATGCG TGATTGGAAGAGTTCGACCAATACACGCAAAGCTAGAGCTGTCTCGCCCT TCTCCCCCGACTATTCGACACCCTTCAAGGTGGTCTAATCTAAGCTTTGT GGTTTCTTGTTTGTCGACCATTTGAAATGCCAGGTTTTGCAGCGAAACGG GGAACCGCACATCGACAGTGTCTTAATGGTAGGGAGCACCCAGACTGCAA ATGCCACGCTTAGTGCTCTAGGTGACAGCCATCCAGATTGTACACGGCTA CGCGCCGACTTCTTGTCCGGCTGGAGGACCCTGACCGGGCTAGCAATAGA GCGAATCTTCAGGATCACGGTGAGCCCCTCTCTATTAGTACCAATAGGTG AAAGCACGTGATGAATATCATTGAAAAGCTCGCGTGTGTGCCGTTTGAAG AGTTTGTGCTGTAGCATGGTGTTGGCTCTGCGCCCTTGACCTCATCTTCA AGCCTGCCCGCAGAAGCTTGAATAGCAGGTTGCAGCCAGACGCACATACG CCTCGGATGTCATCCTCACAAGGGTCAAAGTGCATCAAAAAGTAGGGCTG TCCGGACGAGACAGCACTTGGCCGGCGTGTCCTCCTCACCGTTGTTGCTT GCTAGGTGTCGCCGGAACGGCACGCGATTCGAGGTTGAATACCTCCTTGT TCTTCGAGTGATGACAAGTGACGGGGTGTCAAGGCATACAGTCAGTGATG ACCTTCGCGGGCCGGTCCAAGTACGGCCGCGCGTTTAGTAACAGACCAAT GCCCTCAAAACCTGTCTGTTCATTCGACCAACGCTAGGGTGCTGACCAAG CTTGAATTCTCGCAACCTCGTCCCTCTCCTAGGTTCCCGCAGACGTTGGC GAAACGCACGCCAGCTACGTACGGAGTCACGGGAATGTCGTCCAGCGCTT CCATGGAACCTCTTGCAGAAGCACGTGTAACTTTATCATCGACCCGAAGG TGGGGGGGGGGGGGGGTGATCTTGTAGGCAGTGTCGGCGCCGGTACCTTG TTACTTATCACGTTTGCGGAGTCTTGTCGAGAACGTCTCGTGCGGAAGGA GTAGCACGAGCATTTGGAAACAAACCACATGGTGCCCATCCTCTACTGCA GCCTTGTGACTGCAGTGTTCCTCAAACAACTATTACAACAAGTCTGGCGT CGTGTGTGTGGGCTTTGTTTTTCCGCTTTTACGGCCGTGCATACCCTGGT CGAAGCTCACGAGAGCTGCCCCCTCTTCCACTGTTGCCTCCCCGTCGCAT CCAGAAAGCTTCCCCGTGCGGACTGCAGGCCTGCAAGTTGTGCAACATTT GCCTACGAGGCTTCAAGCTCGGCAAGGCCTCCCGACGGTTCGGACAGGGA GTGTACTTCAGTACCAAGTCTGCCAAGGCCAATGGCTACGCTCAGGGGAC AGAGAAAAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14211:1659..4318+

>mRNA_Ecto-sp13_S_contig14211.3271.1 ID=mRNA_Ecto-sp13_S_contig14211.3271.1|Name=mRNA_Ecto-sp13_S_contig14211.3271.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1209bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14211:1659..4318+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGCTTTGGCACAAGGCGATCCGCTGCCGAAGGCGCGGCTCCAAATG
CTTGGAGATGGAGTCTCCGCGACCGAGGACGCCGGTACAACCAGTTGGAA
ACCACAACAACAGCAGCATCGTTTGGCTCGTAAACGAGCTTGACGGCAAT
ACCTCGCGGATCGGCGAGAATCAACCCGATGTCAACCAAGAGGAGGAGGA
GGAGGAGGAGGAGACAAAGGTTAATCCATCCCGACACTTCTACGGAGCCA
CGGGGTTCGTTGCCGAAGAGCAGCGCCGGGGTGGGGACAATGGTGCGAGA
CTGCTGAGAAAGCAAGAGTTGGTGCGCGCTGGCGATAAAGAGGAGATACA
GGAGCTGCGTGCATCCTTGTTGCAGTTGCGCGATGACCTCCGTAGGAACG
AGGAGATGGCCGCGGCCCGGTTGAAGGCCATTGAGGACGAAAAGGCTACC
TTGGAGGTGGACTTACTAGCGGAGAGGGCGAAGACGGCGAGACAGCAGAA
AACCATGCATTTCCTTCGGGAGACAAATATCGAGGCTCAGTCGCTGGAGA
CCGAGCTGCGAGACCAGGTGGAGACGTTGAAGATAGCAAGGGGCCAACAT
GACGAAGGGCAATTTCAATCGAAAGAGGAGAAGGTCAGGAGCGGGTTGGC
ACGGCTGGTGGAAAAGGATTTGCGGAAGCAGGTGGCCATGCTCGAGCAGT
CAACCGGGCAACAAGCGAACGAAATTCGAGTTCTCTTGGCTCAGCTGCAG
GTTTTGCAGCGAAACGGGGAACCGCACATCGACAGTGTCTTAATGGTAGG
GAGCACCCAGACTGCAAATGCCACGCTTAGTGCTCTAGGTGACAGCCATC
CAGATTGTACACGGCTACGCGCCGACTTCTTGTCCGGCTGGAGGACCCTG
ACCGGGCTAGCAATAGAGCGAATCTTCAGGATCACGGTTCCCGCAGACGT
TGGCGAAACGCACGCCAGCTACGTACGGAGTCACGGGAATGTCGTCCAGC
GCTTCCATGGAACCTCTTGCAGAAGCACGTGTAACTTTATCATCGACCCG
AAGAAAGCTTCCCCGTGCGGACTGCAGGCCTGCAAGTTGTGCAACATTTG
CCTACGAGGCTTCAAGCTCGGCAAGGCCTCCCGACGGTTCGGACAGGGAG
TGTACTTCAGTACCAAGTCTGCCAAGGCCAATGGCTACGCTCAGGGGACA
GAGAAAAAG
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