mRNA_Ecto-sp13_S_contig1421.3270.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1421.3270.1 vs. uniprot
Match: A0A6H5KJ20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ20_9PHAE) HSP 1 Score: 765 bits (1975), Expect = 1.070e-271 Identity = 403/420 (95.95%), Postives = 411/420 (97.86%), Query Frame = 3
Query: 75 MAGAGRSIAAVLFSLIGGVMNATWPLFCKPESPELIRVATSTGWQWENVWLPFIIHSTVLNAIFCVSVVGPDTLSAVYREASPVDLGLVCTFSFLWGSGTACFSLGIQLLGAGPGTALVMSLLVVIGTLLPLIEDHADDAGSPAALVTLLGLLFAISGFVSSALSSGIKARAIEAAQSKAKAKSGADEQADRVEASTAAAAVAAPGATGTPYGKAVTGRTQPGEGTTPAPTKEASDKTKGAGEQTSHLTAVAVCVAGAVMSSMLQFSFVYGDPLITHAEEEEGVSGAAAPLVVWLLAFSLAALWNVAYAVYLLSKNETWARYTWLGWLDAARKFRNITVMSLFFVGHIHFYGQSQHLFGDLGPVVAWPLIMSSTVLSGQIWSVFMKEWAGVPPLAMKVNVASICLLVAAVSIIAVAGAVL 1334
MAGAGRSIAAVLFSLIGGVMNATWPLFCKPESPELIRVATS GWQWENVWLPFIIHSTVLNAIFCVSVVGPD L AVYREASPVDLGLVCTFSFLWGSGTACFSLGIQLLGAGPGTALVMSLLVVIGTLLPLIEDHADDAGSPAALVTLLGLLFAISGFVSSALSSGIKARAIEAAQSKAKA+SGADEQADRVEASTAAAAVAAPGATGTP+ KAVTG TQPG+GTTPA TKEASD+T+GAGE+TSHLTAVAVCVAGAVMSSMLQFSFVYGDPLITHAEEEEGVSGAAAPLVVWLLAFSLAALWNVAYAVYLLSKNETWARYTW+GW D ARK RNITVMSLFFVGHIHFYGQSQHLFGDLGPVVAWPLIMSSTVLSGQIWSVFMKEWAGVPPLAMKVNVASICLLVAAVSIIA+AGAVL
Sbjct: 1 MAGAGRSIAAVLFSLIGGVMNATWPLFCKPESPELIRVATSDGWQWENVWLPFIIHSTVLNAIFCVSVVGPDALLAVYREASPVDLGLVCTFSFLWGSGTACFSLGIQLLGAGPGTALVMSLLVVIGTLLPLIEDHADDAGSPAALVTLLGLLFAISGFVSSALSSGIKARAIEAAQSKAKAESGADEQADRVEASTAAAAVAAPGATGTPHAKAVTGTTQPGKGTTPALTKEASDETQGAGEKTSHLTAVAVCVAGAVMSSMLQFSFVYGDPLITHAEEEEGVSGAAAPLVVWLLAFSLAALWNVAYAVYLLSKNETWARYTWVGWSDVARKSRNITVMSLFFVGHIHFYGQSQHLFGDLGPVVAWPLIMSSTVLSGQIWSVFMKEWAGVPPLAMKVNVASICLLVAAVSIIAIAGAVL 420
BLAST of mRNA_Ecto-sp13_S_contig1421.3270.1 vs. uniprot
Match: D7FKI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKI2_ECTSI) HSP 1 Score: 532 bits (1370), Expect = 5.260e-182 Identity = 289/301 (96.01%), Postives = 293/301 (97.34%), Query Frame = 3
Query: 432 MSLLVVIGTLLPLIEDHADDAGSPAALVTLLGLLFAISGFVSSALSSGIKARAIEAAQSKAKAKSGADEQADRVEASTAAAAVAAPGATGTPYGKAVTGRTQPGEGTTPAPTKEASDKTKGAGEQTSHLTAVAVCVAGAVMSSMLQFSFVYGDPLITHAEEEEGVSGAAAPLVVWLLAFSLAALWNVAYAVYLLSKNETWARYTWLGWLDAARKFRNITVMSLFFVGHIHFYGQSQHLFGDLGPVVAWPLIMSSTVLSGQIWSVFMKEWAGVPPLAMKVNVASICLLVAAVSIIAVAGAVL 1334
MSLLVVIGTLLPLIEDHADDAGSPAALVTLLGLLFAISGFVSSALSSGIKARAIEAAQSK KA+SGADEQADRVEASTAAAAVAAPGATGT + KAVTG TQPGEGTTPAPTKEASD TKGAGE TSHLTAVAVCVAGAVMSSMLQFSFVYGDPLITHAEEEEGVSGAAAPLVVWLLAFSLAALWNVAYAVYLLSKNETWARYTW+GW D ARKFRNITVMSLFFVGHIHFYGQSQHLFGDLGPV+AWPLIMSSTVLSGQIWSVFMKEWAGVPPLAMKVNVASICLLVAAVSIIAVAGAVL
Sbjct: 1 MSLLVVIGTLLPLIEDHADDAGSPAALVTLLGLLFAISGFVSSALSSGIKARAIEAAQSKTKAESGADEQADRVEASTAAAAVAAPGATGTSHAKAVTGTTQPGEGTTPAPTKEASDNTKGAGENTSHLTAVAVCVAGAVMSSMLQFSFVYGDPLITHAEEEEGVSGAAAPLVVWLLAFSLAALWNVAYAVYLLSKNETWARYTWVGWSDVARKFRNITVMSLFFVGHIHFYGQSQHLFGDLGPVIAWPLIMSSTVLSGQIWSVFMKEWAGVPPLAMKVNVASICLLVAAVSIIAVAGAVL 301
BLAST of mRNA_Ecto-sp13_S_contig1421.3270.1 vs. uniprot
Match: C1E840_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E840_MICCC) HSP 1 Score: 200 bits (508), Expect = 1.080e-53 Identity = 145/414 (35.02%), Postives = 210/414 (50.72%), Query Frame = 3
Query: 75 MAGAGRSIAAVLFSLIGGVMNATWPLFCKPESPELIRVATSTGWQWENVWLPFIIHSTVLNAIFCVSVVGPDTLSAVYREASPVDLGLVCTFSFLWGSGTACFSLGIQLLGAGPGTALVMSLLVVIGTLLPLIEDHADDAGSPAALVTLLGLLFAISGFVSSALSSGIKARAIEAAQSKAKAKSGADEQADRVEASTAAAAVAAPGATGTPYGKAVTGRTQPGEGTTPAPTKEASDKTKGAGEQTSHLTAVAVCVAGAVMSSMLQFSFVYGDPLITHAEEEEGVSGAAAPLVVWLLAFSLAALWNVAYAVYLLSKNETWARYTWLGWLDAARKFRNITVMSLFFVGHIHFYGQSQHLFGDLGPVVAWPLIMSSTVLSGQIWSVFMKEWAGVPPLAMKVNVASICLLVAAVSIIA 1316
MA G +I+AV G++N +W L KP++P L+ A W+WE +WL I + N + VVG TL VYR AS +LG +C FS LWG G + I+ +G GT++VM+ +V IGT+LPL AD + + +++G+L A +GF S+ + ++ DE R S A+ TT + D KGA T + ++A CVAG V+SSMLQFSFV+G L+ AEE GV+ A+ + VW+L F ++ +V YA +LL N+TW ++ D A ++++ F HIH YG S G V AWPL+MSSTV + Q+WS+ + EW A N AS+ LLVAAV+++A
Sbjct: 1 MAAVG-AISAVA----AGLLNGSWNLPTKPDAPRLVNAALY--WEWEQIWLVANILIVIFNTFLVLGVVGAGTLGDVYRGASSGELGSICAFSLLWGFGGVGYGQAIKRVGMALGTSIVMAQIVCIGTVLPLAFSAADMT-TQEIVGSVVGVLLACAGFAMSSRAGLLR--------------DAGDEAGGRARGSRAS--------------------------TTTTAAVDVEDPVKGASRST-FVESMAWCVAGGVLSSMLQFSFVFGGGLVDDAEER-GVAKEASAMPVWMLCFLFNSVGHVFYASWLLKANDTWRKFRSTPARDWAHGGVMCALIAVAFTAHIHLYGFSA---SSSGAVFAWPLVMSSTVFTAQVWSLVLGEWTDASLEARVANWASLGLLVAAVAVVA 361
BLAST of mRNA_Ecto-sp13_S_contig1421.3270.1 vs. uniprot
Match: C1MZF1_MICPC (Predicted protein n=3 Tax=Micromonas pusilla TaxID=38833 RepID=C1MZF1_MICPC) HSP 1 Score: 171 bits (432), Expect = 8.560e-43 Identity = 124/409 (30.32%), Postives = 197/409 (48.17%), Query Frame = 3
Query: 99 AAVLFSLIGGVMNATWPLFCKPESPELIRVATSTGWQWENVWLPFIIHSTVLNAIFCVSVVGPDTLSAVYREASPVDLGLVCTFSFLWGSGTACFSLGIQLLGAGPGTALVMSLLVVIGTLLPLIEDHADDAGSPAALVTLLGLLFAISGFVSSALSSGIK--ARAIEAAQSKAKAKSGADEQADRVEASTAAAAVAAPGATGTPYGKAVTGRTQPGEGTTPAPTKEASDKTKGAGEQTSHLTAVAVCVAGAVMSSMLQFSFVYGDPLITHAEEEEGVSGAAAPLVVWLLAFSLAALWNVAYAVYLLSKNETWARYTWLGWLDAARKFRNITVMSLFFVGHIHFYGQSQHLFGDLGPVVAWPLIMSSTVLSGQIWSVFMKEWAGVPPLAMKVNVASICLLVAAVSIIAV 1319
A V+ ++ G+ N +W + K ++P + W+WEN+W F +N F V+VVG +TL +Y A +L +C S LWG G F ++ G GT++ M++++ +GT LP I + A++ + A+ T +G I GF A + I+ A A G + + G G Q G A+ + + +A C+ G V+SSMLQF+FV+G L+ A + GVS AA + +WLL F A ++AY+ L+ N+ W + A+ M++ HIH YG + L GD G V AWP++MSSTV + Q+WSVF++EW G P A++ N AS+ +LV++V +++V
Sbjct: 5 AGVVAAIASGLANGSWNVPTKSQAPRCLHAGEV--WKWENIWFLFNAMLPFINTAFVVAVVGAETLGTIYGNAESSELWAICASSLLWGFGGVGFGQAVKRCGIALGTSICMAVIIALGTALPAIVE-AENLTTAQAVGTSVGASLGIVGFALGAKAGLIRDAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAANDGISISEVGVHAGGEMQVTSGAATTTADAAATRRR------IFAADIAWCLLGGVLSSMLQFAFVFGGGLVDVARDA-GVSKVAAAMPIWLLCFLGNAFGHLAYSCAELTSNDAWGLFASADRKTTAKSSALCVAMAVGMPFHIHTYGIAAVLMGDAGAVFAWPVVMSSTVFTAQLWSVFLREWDGAPREAIRCNAASLVVLVSSVLVVSV 403
BLAST of mRNA_Ecto-sp13_S_contig1421.3270.1 vs. uniprot
Match: A0A7C4BZM7_9BACT (Rhamnose/proton symporter RhaT n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7C4BZM7_9BACT) HSP 1 Score: 137 bits (346), Expect = 6.760e-32 Identity = 110/372 (29.57%), Postives = 159/372 (42.74%), Query Frame = 3
Query: 204 WQWENVWLPFIIHSTVLNAIFCVSVVGPDTLSAVYREASPVDLGLVCTFSFLWGSGTACFSLGIQLLGAGPGTALVMSLLVVIGTLLPLIEDHADDAGSPAALVTLLGLLFAISGFVSSALSSGIKARAIEAAQSKAKAKSGADEQADRVEASTAAAAVAAPGATGTPYGKAVTGRTQPGEGTTPAPTKEASDKTKGAGEQTSHLTAVAVCVAGAVMSSMLQFSFVYGDPLITHAEEEEGVSGAAAPLVVWLLAFSLAALWNVAYAVYLLSKNETWARYTWLGWLDAARKFRNITVMSLFFVGHIHFYGQSQHLFGD-LGPVVAWPLIMSSTVLSGQIWSVFMKEWAGVPPLAMKVNVASICLLVAAVSIIA 1316
W+WEN+WL + + V P+ L +VY ++ LV F F WG G+ F LGI LG G A+++ + +G+LLPL+ + + + + L GL AI+G V A +I AQ + K GA A+D AG + S L+ + +C+A ++S ML F FVYG PL A G A V+W+ A + L N YA+YLLSKN TWA Y G A + M L + G I YG G LG VV WP+ MS +++ +W EW G A ++ + +L+AA+ +IA
Sbjct: 33 WKWENIWLVYSVAGLVFVPALLAFFSVPE-LGSVYANTPASNIALVALFGFGWGLGSTLFGLGIAQLGLALGFAIILGITSSVGSLLPLLISNPSELATRRGVTLLAGLAVAIAGIV---------ACSIAGAQREKDQKGGA-----------------------------------------------AAD----AGGRKSFLSGLLICLASGILSPMLNFGFVYGKPL-QDAATSLGARPDLASTVIWVPALAGGFLPNAGYALYLLSKNRTWAVYREAG--APASYWPLAAAMGLMWFGGIAVYGVGAAAMGSPLGAVVGWPVFMSMVIVTANVWGALTGEWEGAGSRARTLSWLGVAILIAAIVVIA 340
BLAST of mRNA_Ecto-sp13_S_contig1421.3270.1 vs. uniprot
Match: A0A7S0GK63_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GK63_MICPS) HSP 1 Score: 117 bits (292), Expect = 6.000e-25 Identity = 70/188 (37.23%), Postives = 107/188 (56.91%), Query Frame = 3
Query: 834 CVAGAVMSSMLQFSFVYGDPLITHAEEEEGVSGAAAPLVVWLLAFSLAALWNVAYAVYLLSKNETWARYTWLGWLDAARKFRNIT------------------------VMSLFFVGHIHFYGQSQHLFGDLGPVVAWPLIMSSTVLSGQIWSVFMKEWAGVPPLAMKVNVASICLLVAAVSIIAVAG 1325
C+AG V+SSMLQF+FV+G ++ A+ + GV AAA + VWLL F+ A ++AY+ YLL N TW R+ + D ++ ++ +M+L HIH YG + L G G V AWP++MS+TV + Q WS+ ++E+ G P +A + N S+CLLV++V ++AV G
Sbjct: 135 CLAGGVLSSMLQFAFVFGGAVVDLAKNK-GVPDAAAAMPVWLLCFACNAFGHLAYSGYLLRVNGTWRRFFVVSTDDVYKRESDVAFHAGPPKKKKNSWGLTLHAVFMCVLMALAMPFHIHTYGIAAVLLGRTGAVFAWPVVMSATVFTAQSWSLVLREFEGAPKIAKRWNTGSLCLLVSSVVVVAVTG 321
BLAST of mRNA_Ecto-sp13_S_contig1421.3270.1 vs. uniprot
Match: L1IYV3_GUITC (PH domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IYV3_GUITC) HSP 1 Score: 114 bits (286), Expect = 1.020e-22 Identity = 118/408 (28.92%), Postives = 183/408 (44.85%), Query Frame = 3
Query: 105 VLFSLIGGVMNATWPLFCKPESPELIRV----ATSTGWQWENVWLPFIIHSTVLNAIFCVSVVGPDTLSAVYREASPVDLGLVCTFSFLWGSGTACFSLGIQLLGAGPGTALVMSLLVVIGTLLPLIEDHADDAGSPAALVTLLGLLFAISGFVSSALSSGIKARAI---EAAQSKAKAKSG-ADEQADRVEASTAAAAVAAPGATGTPYGKAVTGRTQPGEGTTPAPTKEASDKTKGAGEQT-----------SHLTAVAVCVAGAVMSSMLQFSFVYGDPL----ITHAEEEEGVSGAAAPLVVWLLAFS------LAALWNVAYAVYLLSKNETWARYTWLGWLDAARKFRNITVMS-LFFVGHIHFYGQSQHLFGDLGPVVAWPLIMSSTVLSGQIWSVFMKEW 1238
++ ++GG +N+ W L + ++IRV A +GW WE+ W+ S VLN + + +G D L +S L + SF WG GT F L ++L+G G GTAL MS++V++G + I G+ AL+ L G++ AI GF G+ RA+ E +++ SG + E E S A+ + K V +P PA +K A +G GE S L +V C+ + +S LQ +FV GD L + E V +AA ++ +L S L W + + + E +K NI + + F HIH YG + L G LGPV+AWP++M T+ GQ+W F++E+
Sbjct: 210 IVLPIVGGFLNSVWNLPGNVATSDMIRVVRRPAEESGWCWEHFWMVNQGVSIVLNLAYILPHLGVDNLHHAIVSSSSSGLAAIIVASFTWGFGTIGFGLALRLVGIGLGTALCMSVIVIMGVVWGFIFGGGVPTGAAGALI-LTGVVVAIIGF-------GMLGRAVHLREVGRTRRSETSGESKEHGSGQEMSCASTNLGIDMKEVDESMKFVV--VEPSSPNFPASSKSAF-AAEGGGEAERRPEEPRRRTLSPLQSVGFCMVAGIFASSLQLAFVIGDSLTQQLLALGNWAEFVRWSAAGDIIHVLRDSNRPDERLLISWRNSILSVVEDEQEKALEQ---------KKDTNIEDKTWIAFSCHIHLYGAAAKLLGTLGPVIAWPVLMCCTMTFGQLWGFFLREF 597
BLAST of mRNA_Ecto-sp13_S_contig1421.3270.1 vs. uniprot
Match: A0A2V9VTP6_9BACT (Uncharacterized protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9VTP6_9BACT) HSP 1 Score: 105 bits (261), Expect = 8.720e-21 Identity = 88/345 (25.51%), Postives = 133/345 (38.55%), Query Frame = 3
Query: 303 VYREASPVDLGLVCTFSFLWGSGTACFSLGIQLLGAGPGTALVMSLLVVIGTLLPLIEDHADDAGSPAALVTLLGLLFAISGFVSSALSSGIKARAIEAAQSKAKAKSGADEQADRVEASTAAAAVAAPGATGTPYGKAVTGRTQPGEGTTPAPTKEASDKTKGAGEQTSHLTAVAVCVAGAVMSSMLQFSFVYGDPLITHAEEEEGVSGAAAPLVVWLLAFSLAALWNVAYAVYLLSKNETWARYTWLGWLDAARKFRNITV---MSLFFVGHIHFYGQSQHLFGDLGPVVAWPLIMSSTVLSGQIWSVFMKEWAGVPPLAMKVNVASICLLVAAVSIIAVAGA 1328
+Y AS L V F LWG G F LGI +G G AL++ + G+L PL H++ G+ L + G + I G V AL+ + R + A G ++ + +C+ + SSML FSFV+GD L A + G S A A VW L + + N Y VYLL+KN TW+ + F N + M L + G YG + G LG +V WP+ M+ +++ W EW+G A+ N + +L+ A+++I+ A
Sbjct: 64 IYAGASASTLLKVVLFGLLWGVGATLFGLGISRVGMALGFALILGITASFGSLFPLAILHSEQLGTKRGLALIAGTIVMIVGLVFLALAGRTRERDLGTAD----------------------------------------------------------------GVRSGFTVGLVICIFSGIFSSMLNFSFVFGDELRLRALQA-GASSAMAANPVWALTVTGGFVANFIYCVYLLNKNRTWSAF------HEGNAFANWPLGLSMGLLWFGGTVVYGIGATVLGALGGIVGWPIFMTIDIIAALFWGAVTGEWSGASRRALAYNWIGVGILLVAIAVISAGNA 337
BLAST of mRNA_Ecto-sp13_S_contig1421.3270.1 vs. uniprot
Match: W7Y3L2_9BACT (L-rhamnose-H(+) transport protein n=1 Tax=Saccharicrinis fermentans DSM 9555 = JCM 21142 TaxID=869213 RepID=W7Y3L2_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 1.060e-17 Identity = 87/373 (23.32%), Postives = 154/373 (41.29%), Query Frame = 3
Query: 204 WQWENVWLPFIIHSTVLNAIFCVSVVGPDTLSAVYREASPVDLGLVCTFSFLWGSGTACFSLGIQLLGAGPGTALVMSLLVVIGTLLPLIEDHADDAGSPAALVTLLGLLFAISGFVSSALSSGIKARAIEAAQSKAKAKSGADEQADRVEASTAAAAVAAPGATGTPYGKAVTGRTQPGEGTTPAPTKEASDKTKGAGEQTSHLTAVAVCVAGAVMSSMLQFSFVYGDPLITHAEE-EEGVSGAAAPLVVWLLAFSLAALWNVAYAVYLLSKNETWARYTWLGWLDAARKFRNITVMS-LFFVGHIHFYGQSQHLFGDLGPVVAWPLIMSSTVLSGQIWSVFMKEWAGVPPLAMKVNVASICLLVAAVSIIA 1316
W WEN WL + I + +L A + +++V L VY+ A P +L L+ F +WG G F GI LLG +++ L+ +GT++P++ D+ +P L + G++ + G V +++ G K +E + + K+K + +T + VC+ + M+ F+FVYG+P+ A E V +A P VW +A + + N Y ++L KN + Y +KF + ++ + + I FYG + G +G V W + + ++L G + + EW G M + + LL+ + IIA
Sbjct: 32 WTWENNWLIWSIVA-LLIAPWVMAIVSVPDLIGVYK-AEPENLLLISIFGIIWGIGAIMFGKGIDLLGVSLSFPIMLGLINSVGTIMPIVLRDPDELFTPDGLKIITGVVIILIGIVIVSVA-GSKKNNVEGSNLEGKSKK-------------------------------------------------------------NFVTGIIVCLLAGIFGPMINFAFVYGEPIQAKAVEFGASVLNSANP--VWSIALTGGFIANAFYCIFLFRKNNSLRLYD-----TNFKKFLPLAALAGVIWYFSIMFYGMGSNSLGKMGASVGWATMQTLSILVGNMAGIITGEWKGTQKNTMMLMYGGVSLLIIGLVIIA 333
BLAST of mRNA_Ecto-sp13_S_contig1421.3270.1 vs. uniprot
Match: A0A2V9LS25_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9LS25_9BACT) HSP 1 Score: 91.7 bits (226), Expect = 3.000e-16 Identity = 59/166 (35.54%), Postives = 85/166 (51.20%), Query Frame = 3
Query: 831 VCVAGAVMSSMLQFSFVYGDPLITHAEEEEGVSGAAAPLVVWLLAFSLAALWNVAYAVYLLSKNETWARYTWLGWLDAARKFRNITVMSLFFVGHIHFYGQSQHLFGDLGPVVAWPLIMSSTVLSGQIWSVFMKEWAGVPPLAMKVNVASICLLVAAVSIIAVAGA 1328
+CV + S+ML FSFV+G L+ + G + A P VW LA S L N Y V+LL+KN +W + L A I+VM+L + G I YG G LG VV WPL+M+ TV++ IW EW + + I +L+ A+++I+ GA
Sbjct: 178 ICVLSGIFSAMLNFSFVFGKELVDRSVPGAGTTMGANP--VWALALSAGFLANAGYCVFLLNKNHSWTGFLRGKTLSYAS---GISVMALLWFGAIVVYGAGAADLGALGGVVGWPLLMTMTVITANIWGAVTGEWTQASRASRTYWWSGIAVLLIAITVISRGGA 338 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1421.3270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1421.3270.1 >prot_Ecto-sp13_S_contig1421.3270.1 ID=prot_Ecto-sp13_S_contig1421.3270.1|Name=mRNA_Ecto-sp13_S_contig1421.3270.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=421bp MAGAGRSIAAVLFSLIGGVMNATWPLFCKPESPELIRVATSTGWQWENVWback to top mRNA from alignment at Ecto-sp13_S_contig1421:9735..17240+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1421.3270.1 ID=mRNA_Ecto-sp13_S_contig1421.3270.1|Name=mRNA_Ecto-sp13_S_contig1421.3270.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7506bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1421:9735..17240+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1421:9735..17240+ >mRNA_Ecto-sp13_S_contig1421.3270.1 ID=mRNA_Ecto-sp13_S_contig1421.3270.1|Name=mRNA_Ecto-sp13_S_contig1421.3270.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1263bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1421:9735..17240+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |