prot_Ecto-sp13_S_contig14208.3267.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14208.3267.1
Unique Nameprot_Ecto-sp13_S_contig14208.3267.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length321
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14208.3267.1 vs. uniprot
Match: A0A6H5JJV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV9_9PHAE)

HSP 1 Score: 302 bits (773), Expect = 4.630e-91
Identity = 165/196 (84.18%), Postives = 171/196 (87.24%), Query Frame = 0 
Query:  126 EEALLPLGVASVLWELECCAAQALVTLMSLNEGRPNHFGVFRAGVYVQEMRMLEAKILELVQQADNPREEKNAGLETTTVAAGIRNCVARLWWSRHAGENAETMAWEAFVEAFQSDFGAQLPKTLDVLRKHIAVQGDDYRPAPVPSTALPPTXXXXXSLRHHRPTTTATTS-PWGRRARESAPARSPQNGDSPATT 320
            EEALLPLGVASVLWELECCAAQ LVTLMSLNEGRPNHFGVFRAGVYVQEMRMLEAK       ADNPREEKNAGLETTTVAAGIRNCVARLWW+RHAGENAET+ WEAF EAFQSDFGAQLP+T++VLRKHIAVQGDDYRPAPVPST LPPTXXXXX LR+ RPT       P  RR RES PARSPQNGD PATT
Sbjct:  171 EEALLPLGVASVLWELECCAAQVLVTLMSLNEGRPNHFGVFRAGVYVQEMRMLEAK-------ADNPREEKNAGLETTTVAAGIRNCVARLWWTRHAGENAETLTWEAFEEAFQSDFGAQLPETMEVLRKHIAVQGDDYRPAPVPSTTLPPTXXXXX-LRNGRPTXXXXXXXPRERRTRESTPARSPQNGDLPATT 358
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BLAST of mRNA_Ecto-sp13_S_contig14208.3267.1 vs. uniprot
Match: D7G5L0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L0_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 1.160e-74
Identity = 138/162 (85.19%), Postives = 139/162 (85.80%), Query Frame = 0 
Query:  153 MSLNEGRPNHFGVFRAGVYVQEMRMLEAKILELVQQADNPREEKNAGLETTTVAAGIRNCVARLWWSRHAGENAETMAWEAFVEAFQSDFGAQLPKTLDVLRKHIAVQGDDYRPAPVPSTALPPTXXXXXSLRHHRPTTTATTSPWGRRARESAPARSPQNG 314
            MSLNEGRPNHFGVFRAGVYVQEMRMLEAKILELVQQADNPREEKNAGLETTTVAAGIRNCVARLWWSRHAGEN ETM WEAF EAFQ+DFGAQLPKTLDVLRKHIAVQGDDYR APVPSTALP  XXXXX             SP GRRA ES PARS QNG
Sbjct:    1 MSLNEGRPNHFGVFRAGVYVQEMRMLEAKILELVQQADNPREEKNAGLETTTVAAGIRNCVARLWWSRHAGENGETMTWEAFEEAFQTDFGAQLPKTLDVLRKHIAVQGDDYRAAPVPSTALPXXXXXXXXXXXXXXXXXX--SPRGRRAGESTPARSQQNG 160
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14208.3267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJV9_9PHAE4.630e-9184.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5L0_ECTSI1.160e-7485.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14208contigEcto-sp13_S_contig14208:598..4137 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14208.3267.1mRNA_Ecto-sp13_S_contig14208.3267.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14208 598..4138 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14208.3267.1 ID=prot_Ecto-sp13_S_contig14208.3267.1|Name=mRNA_Ecto-sp13_S_contig14208.3267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=321bp
QVVKLGLQTCLLEPEDRGGPSGGGSSGSSGKAGGGNGLLVASIGGGGARC
RSSSPTVSSTGCTAPQSSKRSTATSTAGVTTPSVGGGGSGGGGGAIIVGK
PRASSSSNSSVFLESGAGGGAGAGGEEALLPLGVASVLWELECCAAQALV
TLMSLNEGRPNHFGVFRAGVYVQEMRMLEAKILELVQQADNPREEKNAGL
ETTTVAAGIRNCVARLWWSRHAGENAETMAWEAFVEAFQSDFGAQLPKTL
DVLRKHIAVQGDDYRPAPVPSTALPPTPPTPPSLRHHRPTTTATTSPWGR
RARESAPARSPQNGDSPATTD
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