prot_Ecto-sp13_S_contig14202.3265.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14202.3265.1
Unique Nameprot_Ecto-sp13_S_contig14202.3265.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length138
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14202.3265.1 vs. uniprot
Match: D8LN51_ECTSI (Whsc1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN51_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 5.160e-37
Identity = 88/110 (80.00%), Postives = 89/110 (80.91%), Query Frame = 0 
Query:   24 SGMTISPRLQAKEIARREQAEHQTNWSQSGRREKRTAKSPXXXXXXAAAKRPRTSTPKARPPAPSKAGSIRHARPAKQRGGETPLEGTKKVGSKKRAPNRPPGSAKTNSS 133
            S MTISPRLQAKEIARREQAEHQ N SQSG    RTA+SP      AAAKRPRTSTPKARPPAPSKAGSIRHARPAKQ GGETP EG KKVG  K A  RPPGSAKTNSS
Sbjct:    2 SSMTISPRLQAKEIARREQAEHQKNRSQSGXXXXRTAQSPPPAEEEAAAKRPRTSTPKARPPAPSKAGSIRHARPAKQLGGETPPEGKKKVGPMKGAAIRPPGSAKTNSS 111
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BLAST of mRNA_Ecto-sp13_S_contig14202.3265.1 vs. uniprot
Match: A0A6H5JWD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWD3_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 3.890e-21
Identity = 68/91 (74.73%), Postives = 69/91 (75.82%), Query Frame = 0 
Query:   42 QAEHQTNWSQSGRREKRTAKSPXXXXXXAAAKRPRTSTPKARPPAPSKAGSIRHARPAKQRGGETPLEGTKKVGSKKRAPNRPPGSAKTNS 132
            QAEHQ N SQS           XXXXXX  AKRPRTSTPKARPPAPSKAGSIRHARPAKQ GGETP  G KKVGSKK A NR PGSAKT+S
Sbjct:   24 QAEHQKNRSQSXXXXXXXXXXXXXXXXXXXAKRPRTSTPKARPPAPSKAGSIRHARPAKQLGGETPQAGNKKVGSKKGAANRTPGSAKTDS 114
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14202.3265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN51_ECTSI5.160e-3780.00Whsc1 protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5JWD3_9PHAE3.890e-2174.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14202contigEcto-sp13_S_contig14202:245..1313 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14202.3265.1mRNA_Ecto-sp13_S_contig14202.3265.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14202 245..1313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14202.3265.1 ID=prot_Ecto-sp13_S_contig14202.3265.1|Name=mRNA_Ecto-sp13_S_contig14202.3265.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=138bp
VGVGGQAYRCARVCILGHTIANASGMTISPRLQAKEIARREQAEHQTNWS
QSGRREKRTAKSPPPAEEEAAAKRPRTSTPKARPPAPSKAGSIRHARPAK
QRGGETPLEGTKKVGSKKRAPNRPPGSAKTNSSSRARR
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