prot_Ecto-sp13_S_contig1420.3264.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1420.3264.1
Unique Nameprot_Ecto-sp13_S_contig1420.3264.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1010
Homology
BLAST of mRNA_Ecto-sp13_S_contig1420.3264.1 vs. uniprot
Match: A0A6H5L887_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L887_9PHAE)

HSP 1 Score: 1192 bits (3083), Expect = 0.000e+0
Identity = 860/1059 (81.21%), Postives = 872/1059 (82.34%), Query Frame = 0
Query:    1 MTTLASTLDAKKAASPLVSPCVRRLGGAFSPALGDPMSXXXXXXXXXXXXXXXXXXXXXXXXX-----LNNGNVNGRWKRDLEPGGCEEQQPPPAKRASPVPRKPHNPETRAAETAVARPP-DGAAAVPVAPXXXXXXXXRAWQSSPTYSLNGGAGGTHARARENALVMSRTRPTSXXXXXXXXXXXXXXXXXXXXXXXAGSEVSSSGGTRPSRANTLGADRPRSPPALLEKPAVLPSTPNGQHSSHQQPPRXXXXXXXXXXXXXXMRTMVGHHHHRRDILQPSPAKHNVEAGSCGLEGGIGAAAAXXXXXXXXXXX------ESEGDSPGNSCEGTRRPLGGGLRASASCDGGSASDAPPGSGGGFSAPPALSESCEGREAGSCSGAGXXXXXXXXXXXXXALRPPSTICLSPLPFARSMSTESSXXXXXXXXXXXFANDLRRNSLGEGDGFTDGAYSFSSLQSTSSTGTY------------------------------------------PAGIGRSASGXXXXXXXXXXXXXXXXXXXX-SRGVDELEMLIGNDNMHDIQDCMRTLQASPTHGSSXXXXXXXXXXXXXSAAPIGFYISSLDEAHHXXXXXXXXXXXSGDMDVEGAXXXXXXXXXXXXXXXXXXXXXXXXDPFGRQEDSFGAAAALTSHDDEVGPKIGDSHQAVIPKLSSVTEDGTPLRSSPRPPPLQLWRPGVLSRAALDLALPKPRPGGAGSAELEQKMLAAFLIAKTNESERWSDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARATXXXXVMASRAEGAGKGLFRAAATATAADVTGASEMDTDDLQGLAAVVMAGEGARWRSDWPEEDRAAFRRGIFAFRRDFHRVRAAFLPHKVYGDVVEYFYRRWKRNPEYAAWKCTDQLVGRRVAKRVETTHVREGAGQAKSFETLGMRRGWVVEKEDMLLHGRDEDMFVIRYPRMGVFQVKFERVDLGTLETMLVEGSASDEDRAEEGLEDSGGSVPRSSSSFHAPYNSAAPAESRGGLHHHLMAAGQRSLGDRQAQR 1004
            MTTLASTLDAKKAASPLVSPC+RRLGGAFSPALGDPMS   XXXXXXXXXXXXXXXXXXXXXX     LNNGNVNGRWKRDLEPGGCEEQQPPPAKRASPVPRKPHNPETRAAETAVARPP DGAAAVP+APXXXXXXXXRAWQ SPTYSLNGGAGG+HARARENA VMSR   TS            XXXXXXXXXXX GSEV S GGTRPSRAN LGADRPRSPPAL EK A LPSTPNGQHSSH QPPRXXXXXXXXXXXXXX RTMVGH HHRRDIL PSPAKHNV AGSCGLEGG G+A  XXXXXXXXXXX      ESEGDSPGNSC+GT+RPLGGGLRASASCDGGSASDAPPGSGGGFSAPPAL ESCEG+EAGSCS AG   XXXXXXXXX ALRPPSTICLSPLPFARSMSTESSXXXXXXXXXXX                                                                             PAGIGRSASGXXXXXXXXXXXXXXXXXXXX SRGVDELEMLIGNDNMHDIQDCMRTLQASPTHGSSXXXXXXXXXXXXX    IGFYISSLDEA  XXXXXXXXXXXSGDMDVEGA          XXXXXXXXX     DPFGRQEDS+GAAA LTS+DDEVGPKIGDSHQAVIPKLSS+TEDGTPLRSSPRPPPLQLWRPGVLS AALDLALPKP PGGAGSAELEQKMLAAFLIAKTNESER SD  XXX                XXXXXXXXXXXXXX     XXXX   SRAEGAGKGLFRAAATATAADVTGASE DTD L GLAAVVMAGEGARWRSDW EEDRAAFRRGIFAFRRDFHRVRAAFLPHKVYGDVVEYFYRRWKRNPEYAAWKCTDQLVGRRVAKRVETTHVREGAGQAK FETLGMRRGWVVEKEDMLLHGRDEDMFVIRYPRMGVFQVKFERVDLGTLETMLVEGSASDEDRAEEGLEDSGGSVPRS+SSFHAPYNSAAPA+SRGGLHHHLMAAGQRSLGDRQAQR
Sbjct:    1 MTTLASTLDAKKAASPLVSPCIRRLGGAFSPALGDPMSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNGNVNGRWKRDLEPGGCEEQQPPPAKRASPVPRKPHNPETRAAETAVARPPGDGAAAVPMAPXXXXXXXXRAWQLSPTYSLNGGAGGSHARARENAFVMSRAHTTSPSKATAVKAGAAXXXXXXXXXXX-GSEVLSLGGTRPSRANMLGADRPRSPPALSEKLAFLPSTPNGQHSSHHQPPRXXXXXXXXXXXXXXXRTMVGHRHHRRDILHPSPAKHNVVAGSCGLEGGAGSAXXXXXXXXXXXXXXXXXXSESEGDSPGNSCKGTKRPLGGGLRASASCDGGSASDAPPGSGGGFSAPPALFESCEGKEAGSCSDAGGKGXXXXXXXXX-ALRPPSTICLSPLPFARSMSTESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGIGRSASGXXXXXXXXXXXXXXXXXXXXXSRGVDELEMLIGNDNMHDIQDCMRTLQASPTHGSSXXXXXXXXXXXXXXXXXIGFYISSLDEAXXXXXXXXXXXXXSGDMDVEGAGSRSNGALGGXXXXXXXXXA----DPFGRQEDSYGAAATLTSYDDEVGPKIGDSHQAVIPKLSSMTEDGTPLRSSPRPPPLQLWRPGVLSHAALDLALPKPCPGGAGSAELEQKMLAAFLIAKTNESERRSDGXXXXRDSLSACGSSDGGDAAXXXXXXXXXXXXXXXXXXXXXXX---SRAEGAGKGLFRAAATATAADVTGASERDTDGLHGLAAVVMAGEGARWRSDWSEEDRAAFRRGIFAFRRDFHRVRAAFLPHKVYGDVVEYFYRRWKRNPEYAAWKCTDQLVGRRVAKRVETTHVREGAGQAKRFETLGMRRGWVVEKEDMLLHGRDEDMFVIRYPRMGVFQVKFERVDLGTLETMLVEGSASDEDRAEEGLEDSGGSVPRSTSSFHAPYNSAAPADSRGGLHHHLMAAGQRSLGDRQAQR 1050          
BLAST of mRNA_Ecto-sp13_S_contig1420.3264.1 vs. uniprot
Match: D8LF90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF90_ECTSI)

HSP 1 Score: 442 bits (1137), Expect = 5.810e-143
Identity = 342/545 (62.75%), Postives = 346/545 (63.49%), Query Frame = 0
Query:  409 MSTESSXXXXXXXXXXXFANDLRRNSLGEGDGFTDGAYSFSSLQSTSSTGTYPAGIGRSASGXXXXXXXXXXXXXXXXXXXXSRGVDELEMLIGNDNMHDIQDCMRTLQASPTHGSSXXXXXXXXXXXXXSAAPIGFYISSLDEAHHXXXXXXXXXXXSGDMDVEGAXXXXXXXXXXXXXXXXXXXXXXXXDPFGRQEDSFGAAAALTSHDDEVGPKIGDSHQAVIPKLSSVTEDGTPLRSSPRPPPLQLWRPGVLSRAALDLALPKPRPGGAGSAELEQKMLAAFLIAKTNESERWSDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARATXXXXVMASRAEGAGKGLFRAAATATAADVTGASEMDTDDLQGLAAVVMAGEGARWRSDWPEEDRAAFRRGIFAFRRDFHRVRAAFLPHKVYGDVVEYFYRRWKRNPEYAAWKCTDQLVGRRVAKRVETTHVREGAGQAKSFETLGMRRGWVVEKEDMLLHGRDEDMFVIRYPRMGVFQVKFERVDLGTLETMLVEGSASDEDRAEE 953
            MSTESS            ANDLRRN LGEGDGFTDG YSFSSLQSTSSTGT+PAGIGRSASGXXXXXXXXXXXXXXXXXXXXSRGVDELEMLIGNDNMHDIQDCMRTLQASPTHGSSXXXXXXXXXXXXX     GFYIS L     XXXXXXXXXX SGDMDVEGA    XXXXXXXXXXXXXXXX    DPFG++EDSFGAAAALTS+DDEVGPKIGDSHQAVIPKLSSVTEDGT LRSSPRPPPLQLWRPG LS AALDLALPKPRPGGAGSAELEQKM                                                                                                                                                             RWKRNPEYAAWKCTDQLVGRRVAKRVETTHVREGAGQAK FETLGMRRGWVVEKEDMLLHGRDEDMFVIRYPRMGVFQVKFE  DLGTLETMLVE SASDEDR EE
Sbjct:    1 MSTESSGAGGGGV-----ANDLRRNLLGEGDGFTDGGYSFSSLQSTSSTGTHPAGIGRSASGXXXXXXXXXXXXXXXXXXXXSRGVDELEMLIGNDNMHDIQDCMRTLQASPTHGSSXXXXXXXXXXXXXXXXXXGFYISXLXXXXXXXXXXXXXXX-SGDMDVEGAGSRSXXXXXXXXXXXXXXXX----DPFGQEEDSFGAAAALTSYDDEVGPKIGDSHQAVIPKLSSVTEDGTTLRSSPRPPPLQLWRPGALSPAALDLALPKPRPGGAGSAELEQKM-------------------------------------------------------------------------------------------------------------------------------------------------------------RWKRNPEYAAWKCTDQLVGRRVAKRVETTHVREGAGQAKRFETLGMRRGWVVEKEDMLLHGRDEDMFVIRYPRMGVFQVKFEG-DLGTLETMLVERSASDEDRGEE 377          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1420.3264.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L887_9PHAE0.000e+081.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF90_ECTSI5.810e-14362.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 799..864
e-value: 1.9E-11
score: 45.6
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 804..854

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1420contigEcto-sp13_S_contig1420:9557..14240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1420.3264.1mRNA_Ecto-sp13_S_contig1420.3264.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1420 9557..14240 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1420.3264.1 ID=prot_Ecto-sp13_S_contig1420.3264.1|Name=mRNA_Ecto-sp13_S_contig1420.3264.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1010bp
MTTLASTLDAKKAASPLVSPCVRRLGGAFSPALGDPMSDDGTGGGCGGIA
GGGGGGGGGGGCGLNNGNVNGRWKRDLEPGGCEEQQPPPAKRASPVPRKP
HNPETRAAETAVARPPDGAAAVPVAPAPAPAPTPRAWQSSPTYSLNGGAG
GTHARARENALVMSRTRPTSPSKATAAKAGAAAAAAAAAAAVAAGSEVSS
SGGTRPSRANTLGADRPRSPPALLEKPAVLPSTPNGQHSSHQQPPRPRPN
PSSLSASSSSMRTMVGHHHHRRDILQPSPAKHNVEAGSCGLEGGIGAAAA
ATAAAGAAGGSESEGDSPGNSCEGTRRPLGGGLRASASCDGGSASDAPPG
SGGGFSAPPALSESCEGREAGSCSGAGGKGGGGGGGGGGGALRPPSTICL
SPLPFARSMSTESSGAGGGGGGGGGFANDLRRNSLGEGDGFTDGAYSFSS
LQSTSSTGTYPAGIGRSASGGGSSAGGGGGGGGGGGSGGGSRGVDELEML
IGNDNMHDIQDCMRTLQASPTHGSSSSSHHPDHHAAAPSAAPIGFYISSL
DEAHHHDGDSGGGGGSSGDMDVEGAGSRSNGGLGGGGSGSGIDGGGGGGD
PFGRQEDSFGAAAALTSHDDEVGPKIGDSHQAVIPKLSSVTEDGTPLRSS
PRPPPLQLWRPGVLSRAALDLALPKPRPGGAGSAELEQKMLAAFLIAKTN
ESERWSDRGGGGGGGRDSLSAGGSSAGGNAAASAAAAAAAAAKARATAAA
AVMASRAEGAGKGLFRAAATATAADVTGASEMDTDDLQGLAAVVMAGEGA
RWRSDWPEEDRAAFRRGIFAFRRDFHRVRAAFLPHKVYGDVVEYFYRRWK
RNPEYAAWKCTDQLVGRRVAKRVETTHVREGAGQAKSFETLGMRRGWVVE
KEDMLLHGRDEDMFVIRYPRMGVFQVKFERVDLGTLETMLVEGSASDEDR
AEEGLEDSGGSVPRSSSSFHAPYNSAAPAESRGGLHHHLMAAGQRSLGDR
QAQREDDDDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf