prot_Ecto-sp13_S_contig14198.3256.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14198.3256.1
Unique Nameprot_Ecto-sp13_S_contig14198.3256.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length111
Homology
BLAST of mRNA_Ecto-sp13_S_contig14198.3256.1 vs. uniprot
Match: A0A6H5J7F0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7F0_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.170e-18
Identity = 43/59 (72.88%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 MDGISARVQLAPTLANLEVYVDPRRLSEGHAPGILVESVCLDPSKGVVVMLTSDHGYTS 59
            +DGI+ARVQL+  L NL VY+DPRRLSEG APG  VE+V LDP KGVVVMLT+DH YTS
Sbjct:  102 VDGITARVQLSSALTNLWVYIDPRRLSEGRAPGTRVETVGLDPRKGVVVMLTTDHDYTS 160          
BLAST of mRNA_Ecto-sp13_S_contig14198.3256.1 vs. uniprot
Match: D7FUS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUS6_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 2.610e-18
Identity = 43/59 (72.88%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 MDGISARVQLAPTLANLEVYVDPRRLSEGHAPGILVESVCLDPSKGVVVMLTSDHGYTS 59
            +DGISA VQL+PTL N+ VYVDPRRLSEG APG  V++V LDPSKGVVVMLT+ H Y S
Sbjct:  103 VDGISASVQLSPTLTNVWVYVDPRRLSEGRAPGTCVKTVGLDPSKGVVVMLTTPHDYMS 161          
BLAST of mRNA_Ecto-sp13_S_contig14198.3256.1 vs. uniprot
Match: D7G896_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G896_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 1.160e-17
Identity = 43/59 (72.88%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 MDGISARVQLAPTLANLEVYVDPRRLSEGHAPGILVESVCLDPSKGVVVMLTSDHGYTS 59
            +DGI+ARVQL+  L NL VY+DPRRLSEG A G  VE+V LDPSKGVVVMLT+D+GYTS
Sbjct:  100 VDGITARVQLSSVLTNLWVYIDPRRLSEGRALGTSVETVGLDPSKGVVVMLTTDYGYTS 158          
BLAST of mRNA_Ecto-sp13_S_contig14198.3256.1 vs. uniprot
Match: A0A6H5JA28_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA28_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 5.900e-15
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 0
Query:    1 MDGISARVQLAPTLANLEVYVDPRRLSEGHAPGILVESVCLDPSKGVVVMLTSDHGYTS 59
            +DGISARV L+P L N+ VYV PRRLSEG A G  V++V LDPSKGV+VMLT+ H Y S
Sbjct:  103 VDGISARVHLSPALTNIWVYVGPRRLSEGRASGTCVKTVGLDPSKGVLVMLTTPHDYIS 161          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14198.3256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J7F0_9PHAE1.170e-1872.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUS6_ECTSI2.610e-1872.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G896_ECTSI1.160e-1772.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA28_9PHAE5.900e-1566.10PARP catalytic domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14198contigEcto-sp13_S_contig14198:207..1824 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14198.3256.1mRNA_Ecto-sp13_S_contig14198.3256.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14198 2..1894 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14198.3256.1 ID=prot_Ecto-sp13_S_contig14198.3256.1|Name=mRNA_Ecto-sp13_S_contig14198.3256.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=111bp
MDGISARVQLAPTLANLEVYVDPRRLSEGHAPGILVESVCLDPSKGVVVM
LTSDHGYTSQMVESRLGKAGGTGGDGRAETAHLRKYDEHKAQLCLADEEL
RPALRLHGIH*
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