mRNA_Ecto-sp13_S_contig14194.3254.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14194.3254.1
Unique NamemRNA_Ecto-sp13_S_contig14194.3254.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14194.3254.1 vs. uniprot
Match: D8LH15_ECTSI (GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH15_ECTSI)

HSP 1 Score: 637 bits (1644), Expect = 6.320e-226
Identity = 326/331 (98.49%), Postives = 329/331 (99.40%), Query Frame = 1
Query:    1 QAAAEAGLESNRPLSEEEEAEEPVQLALVGRPNVGKSSLLNAVLREDRALTGPTPGLTRDAVAVEWTWGGRAVRLVDTAGIRKSGRRDTTTPLEELAVNDSMNAIHKAQVVVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSDLSGVSPGEYAKGVIRQVEDLMPDVRAPPVLSVCALDGSGVGSLMRAVIKARERWRARVPTAVLNRWLRKIVFLHPPPRDSTTGGACSLKYLTQVKRGPPEFRVFVNHLSIPADYQRYITKNLQKEFGFHGMQVRLSLKKSVNVYDPEGRGGSGKGRPKRKFGKKGRLLPLPPSPTRYRPGSHK 993
            +AAAEAGLESNRPLSEEEEAEEPVQLALVGRPNVGKSSLLNAVLREDRALTGPTPGLTRDAVAVEWTWGG+AVRLVDTAGIRKSG RDTTTPLEELAV DSMNAIHKAQVVVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSDLSGVSPGEYAKGVIRQVEDLMPDVRAPPVLSVCALDGSGVGSLMR+VIKARERWRARVPTAVLNRWLRKIVFLHPPPRDSTTGGACSLKYLTQVKRGPPEFRVFVNHLSIPADYQRYITKNLQKEFGFHGMQVRLSLKKSVNVYDPEGRGGSGKGRPKRKFGKKGRLLPLPPSPTRYRPGSHK
Sbjct:  299 EAAAEAGLESNRPLSEEEEAEEPVQLALVGRPNVGKSSLLNAVLREDRALTGPTPGLTRDAVAVEWTWGGKAVRLVDTAGIRKSGSRDTTTPLEELAVKDSMNAIHKAQVVVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSDLSGVSPGEYAKGVIRQVEDLMPDVRAPPVLSVCALDGSGVGSLMRSVIKARERWRARVPTAVLNRWLRKIVFLHPPPRDSTTGGACSLKYLTQVKRGPPEFRVFVNHLSIPADYQRYITKNLQKEFGFHGMQVRLSLKKSVNVYDPEGRGGSGKGRPKRKFGKKGRLLPLPPSPTRYRPGSHK 629          
BLAST of mRNA_Ecto-sp13_S_contig14194.3254.1 vs. uniprot
Match: A0A7S2LTB8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LTB8_9STRA)

HSP 1 Score: 252 bits (644), Expect = 1.720e-77
Identity = 134/280 (47.86%), Postives = 188/280 (67.14%), Query Frame = 1
Query:   25 ESNRPLSEEEEAEEPVQLALVGRPNVGKSSLLNAVLREDRALTGPTPGLTRDAVAVEWTWGGRAVRLVDTAGIRKSGRRDTTTPLEELAVNDSMNAIHKAQVVVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSDL--SGVSPGEYAKGVIRQVEDLMPDVRAPPVLSVCALDGSGVGSLMRAVIKARERWRARVPTAVLNRWLRKIVFLHPPPRDSTTGGACSLKYLTQVKRGPPEFRVFVNHLSIPADYQRYITKNLQKEFGFHGMQVRLSLK 858
            + N+   EE+   +P+QLA++GR NVGKS+L+NA+L+++R +TG   GLTRDA+AVEW+W GR V+LVDTAGIRK  +R     +E+LAV D++ A+  A V VLVLD + GML++ EL+IA  V  EGRALVVAANK D+    VS  E+A+GV  Q+E  +P +R  PV+++ +L G  V  LM  V  AR+RW+ ++ T +LNRWL  IV  +PPP   T G    +KY+ Q K  PP F +F N L +P  Y R+++K+ Q  F   GM+VR ++K
Sbjct:   99 DKNKDKKEEDHVNKPLQLAILGRQNVGKSTLVNALLKQERVITGELAGLTRDAIAVEWSWEGRPVKLVDTAGIRKISQRVHDDSIEDLAVLDAVRAMKVADVAVLVLDAAAGMLQRHELAIADAVVKEGRALVVAANKWDILEDDVSRKEFAEGVSEQIEVRLPMLRRTPVVAMSSLRGDSVEELMPVVFNARDRWQRKISTGLLNRWLLDIVENYPPPL--TKGRPTKIKYVVQTKGRPPTFLLFCNVLELPLTYIRFLSKHFQDSFEMFGMEVRFAVK 376          
BLAST of mRNA_Ecto-sp13_S_contig14194.3254.1 vs. uniprot
Match: A0A7S0CBQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBQ9_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.520e-75
Identity = 129/281 (45.91%), Postives = 182/281 (64.77%), Query Frame = 1
Query:   37 PLSEEEEAEEPVQLALVGRPNVGKSSLLNAVLREDRALTGPTPGLTRDAVAVEWTWGGRAVRLVDTAGIRKSGRRDTT-TPLEELAVNDSMNAIHKAQVVVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSDL---SGVSPGEYAKGVIRQVEDLMPDVRAPPVLSVCALDGSGVGSLMRAVIKARERWRARVPTAVLNRWLRKIVFLHPPPRDSTTGG-ACSLKYLTQVKRGPPEFRVFVNHLSIPADYQRYITKNLQKEFGFHGMQVRLSLKKS 864
            P   ++  E+P+QL ++GRPNVGKS+L+NA+L+++R +TG TPGLTRD+++V WTW  R V+LVDTAGIRKS  R      +E++AV D+M A+  A V VLVLD   G+L++ EL+IA  V  EGR+LV+ ANK DL      S  +YA  V +Q+E   P +R  PV+++ +L G  V +LM  V  AR+RW+  + T +LNRWL+++   HPPP   + G  A  +KY+ Q K  PP F +F N   IP  Y R++ +N Q  F   GM  R+S+KKS
Sbjct:   53 PNESDDGPEKPLQLTILGRPNVGKSTLVNALLKQERVITGATPGLTRDSISVNWTWNDRPVQLVDTAGIRKSSNRAKHGDDIEDMAVRDAMRALKVADVAVLVLDAEAGVLQRQELAIADAVVREGRSLVICANKMDLIVDQEYSAKQYAMDVSQQIELRFPMLRKTPVVAMSSLTGKNVQALMPVVFNARDRWQRVISTGILNRWLQEVTASHPPPTVRSGGTKATKIKYILQTKGRPPTFLLFCNVDDIPQSYIRFLARNFQDTFFMFGMDTRMSIKKS 333          
BLAST of mRNA_Ecto-sp13_S_contig14194.3254.1 vs. uniprot
Match: A0A7S4W2G9_9STRA (GTPase Der n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W2G9_9STRA)

HSP 1 Score: 247 bits (630), Expect = 4.280e-73
Identity = 131/278 (47.12%), Postives = 185/278 (66.55%), Query Frame = 1
Query:   52 EEAEEPVQLALVGRPNVGKSSLLNAVLREDRALTGPTPGLTRDAVAVEWTWGGRAVRLVDTAGIRKSGRRDTTTP-LEELAVNDSMNAIHKAQVVVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSDLSGV----SPGEYAKGVIRQVEDLMPDVRAPPVLSVCALDGSGVGSLMRAVIKARERWRARVPTAVLNRWLRKIVFLHPPPRDSTTGGACSLKYLTQVKRGPPEFRVFVNHLSIPADYQRYITKNLQKEFGFHGMQVRLSLKKSVN 870
            +EAE+P+QLA++GR NVGKS+L+N++L++DR +TG TPGLTRD++ V WTW  R VRL DTAGIR++ +RD     +E+LAV D+M ++  A V V+VLD    ML++ EL+IA  V  EGRALVVAANK DL G+    S  +YA+ V +Q+E   P +R  P++ +  L   GV  LM  V  AR+RW  ++ T +LNRWL  ++    PP  S+ G    +KY+ Q K  PP F +F N   +P  Y RY+T+N Q+ F  +GM+VRL++KKS +
Sbjct:  318 DEAEKPLQLAILGRQNVGKSTLVNSLLKQDRVITGETPGLTRDSITVTWTWNNRPVRLCDTAGIRRATKRDRANDNIEDLAVADAMRSMKVADVAVMVLDARARMLQRQELAIADQVVKEGRALVVAANKMDLLGLDHTYSKEDYAQQVRQQLELRFPMLRKTPIVPMSGLTLEGVQDLMPVVFDARDRWSQKISTGLLNRWLEDVLDTKQPPLQSS-GIPTKIKYIIQTKGRPPTFLLFCNTDELPLSYIRYLTRNFQETFKMYGMEVRLAVKKSTS 594          
BLAST of mRNA_Ecto-sp13_S_contig14194.3254.1 vs. uniprot
Match: A0A7S4N241_9STRA (GTPase Der n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N241_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.430e-72
Identity = 126/271 (46.49%), Postives = 178/271 (65.68%), Query Frame = 1
Query:   61 EEPVQLALVGRPNVGKSSLLNAVLREDRALTGPTPGLTRDAVAVEWTWGGRAVRLVDTAGIRKSGRRDTTTPLEELAVNDSMNAIHKAQVVVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSDL---SGVSPGEYAKGVIRQVEDLMPDVRAPPVLSVCALDGSGVGSLMRAVIKARERWRARVPTAVLNRWLRKIVFLHPPPRDSTTGGACSLKYLTQVKRGPPEFRVFVNHLSIPADYQRYITKNLQKEFGFHGMQVRLSLKKS 864
            E  +QLA++GR NVGKS+L+NA+LR++R + G  PGLTRDA+AVEW W GR VRLVDTAGIRK+G+R+ +  +E+LAV D+M A+  A V VLVLD    +L++ EL+IA     EGR+LVVAANK DL   +  +  +YA  V  Q++   P +R  PV+++ +L G  V  LM  V  AR+RW   + T +LN WL +++    PP     G    ++Y+ Q K  PP F +F N   +PA Y RY+T+N Q+ F  +GM+VR+++KKS
Sbjct:  229 ERALQLAILGRQNVGKSTLVNALLRQNRVIAGSMPGLTRDAIAVEWEWRGRPVRLVDTAGIRKAGKRERSNDIEDLAVQDAMRAMKVADVAVLVLDAEARVLQRQELAIADAAVREGRSLVVAANKMDLLVEADYTRQQYADAVQEQIQVRFPMLRKTPVVAMSSLTGECVEDLMPVVFDARDRWEKVISTGLLNSWLAEVIDAQAPPY--VNGRPAKIRYIMQTKGRPPTFLLFCNVSELPASYLRYLTRNFQETFKMYGMEVRMAIKKS 497          
BLAST of mRNA_Ecto-sp13_S_contig14194.3254.1 vs. uniprot
Match: A0A6A4DZD2_9STRA (GTPase Der n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A4DZD2_9STRA)

HSP 1 Score: 243 bits (620), Expect = 2.270e-72
Identity = 132/273 (48.35%), Postives = 183/273 (67.03%), Query Frame = 1
Query:   49 EEEAEEP--VQLALVGRPNVGKSSLLNAVLREDRALTGPTPGLTRDAVAVEWTWGGRAVRLVDTAGIRKSGRRDTTTPLEELAVNDSMNAIHKAQVVVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSDLSGVSPGEYAKGVIRQVEDLMPDVRAPPVLSVCALDGSGVGSLMRAVIKARERWRARVPTAVLNRWLRKIVFLHPPPRDSTTGGACSLKYLTQVKRGPPEFRVFVNHLS-IPADYQRYITKNLQKEFGFHGMQVRLSLK 858
            EEE ++P  ++LA+VGRPNVGKS+LLN ++R DR LTGP PG+TRD+V V WT+ GR ++LVDTAGIR+  +RD    +E L+V D+  AI  AQVVV+V+D SE  L   +L+IA  V  EGRALV+AANKSDL+G +     + +  +++D +  VR  PV+ + AL G+G+  L+  V+KA E+W  RV T  LNRWL+ +   HPPP  +  G   ++KY TQVK  PP F VFV+  S +P  YQR++   L++EF   G+  RL L+
Sbjct:  229 EEEDDDPRTIKLAIVGRPNVGKSTLLNKIVRNDRVLTGPEPGVTRDSVEVPWTFHGRPIKLVDTAGIRRYSKRDHDDQIENLSVRDAFRAIDSAQVVVVVVDMSEPKLIHMDLTIAQRVIEEGRALVLAANKSDLAGANVEYEMQRIQNELQDSLAQVRGVPVVPISALTGNGIKKLVPEVLKAYEKWDLRVTTGRLNRWLKAMARHHPPP--TVKGKTLNVKYATQVKSRPPTFAVFVSKPSDVPEAYQRFLLTQLREEFDMVGVPARLLLR 499          
BLAST of mRNA_Ecto-sp13_S_contig14194.3254.1 vs. uniprot
Match: B8BRP6_THAPS (GTPase Der (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRP6_THAPS)

HSP 1 Score: 233 bits (595), Expect = 1.040e-69
Identity = 123/270 (45.56%), Postives = 177/270 (65.56%), Query Frame = 1
Query:   67 PVQLALVGRPNVGKSSLLNAVLREDRALTGPTPGLTRDAVAVEWTWGGRAVRLVDTAGIRKSGRRDTTTPLEELAVNDSMNAIHKAQVVVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSDL---SGVSPGEYAKGVIRQVEDLMPDVRAPPVLSVCALDGSGVGSLMRAVIKARERWRARVPTAVLNRWLRKIVFLHPPPRDSTTGGACSLKYLTQVKRGPPEFRVFVNHLSIPADYQRYITKNLQKEFGFHGMQVRLSLKKSV 867
            P+QLA++GR NVGKS+L+N++L EDR + G TPGLTRD+++V   W  + V+LVDTAGIR+  +R+ +  +E+LAV D+M A+  A V VLVLD     +++ EL+IA  V  EGRALVVAANK DL   +G +  ++A  V  Q+E   P +R  PV+++ +L G  V  LM  V +AR+RW   V T +LNRWL +++  H PP  S  G    +KY+ Q K  PP F +F N   +P +Y RY+T++ Q  F ++GM+VR+ +KKS 
Sbjct:  151 PLQLAILGRQNVGKSTLVNSLLGEDRVIAGDTPGLTRDSISVPLMWKDKHVQLVDTAGIRRGVKRERSNEIEDLAVLDAMRAMKFADVAVLVLDAQARYIQRQELAIADAVVREGRALVVAANKMDLIVDAGYTKEDFANAVQGQIETRFPMLRKTPVIAMSSLYGKNVHKLMPVVFEARDRWSRVVSTGMLNRWLEEVLDEHSPP--SQQGRPTKIKYILQTKGRPPTFLLFCNVPELPINYLRYLTRHFQDSFSYYGMEVRMVVKKSA 418          
BLAST of mRNA_Ecto-sp13_S_contig14194.3254.1 vs. uniprot
Match: A0A7S1BMN0_9STRA (GTPase Der n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BMN0_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.170e-69
Identity = 134/293 (45.73%), Postives = 186/293 (63.48%), Query Frame = 1
Query:   22 LESNRPLSEEEEAEEPVQLALVGRPNVGKSSLLNAVLREDRALTGPTPGLTRDAVAVEWTWG-GRAVRLVDTAGIRKSGRRDTTTPLEELAVNDSMNAIHKAQVVVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSDL--SGVSPGEYAKGVIRQVEDLMPDVRAPPVLSVCALDGSG-VGSLMRAVIKARERWRARVPTAVLNRWLRKIVFLHPPPRDSTTGGACSL--KYLTQVKRGPPEFRVFVNHLSIPADYQRYITKNLQKEFGFHGMQVRLSLKKSVNVYDP 882
            LE      ++ +A  P+QLA++GR NVGKS+LLNA+L E+R ++GP+PGLTRDA++VE+    GR VRLVDTAGIRK  RRD +  +E+L+V  S+ A+  A+V++LV+D + G L KTEL++A  V  EGRALVV ANK DL    VSP EY  GV   V   +P +   PV+ V AL+G+     ++ A   A+ERW   + T +LNRWL  ++  +PPP   T G  C +  KY+ Q K  PP F +F N  S+P  Y R++ ++ Q+ F   GM VRL +KKS    +P
Sbjct:  373 LEEGTKQDDKNDACRPLQLAIIGRQNVGKSTLLNALLGEERVISGPSPGLTRDAISVEFMHSDGRVVRLVDTAGIRKISRRDASDTIEDLSVEGSLRALRLAEVILLVVDAASGCLSKTELALADAVVREGRALVVVANKYDLVADAVSPEEYQSGVAEHVAISLPVLEGTPVVPVGALEGNPHPRDVLDAAFHAKERWERTLSTGLLNRWLSDVLETNPPP---TVGAGCRIRIKYVVQTKGRPPTFLLFANVKSLPEHYMRHLRRSFQQTFDMFGMDVRLIMKKSDENRNP 662          
BLAST of mRNA_Ecto-sp13_S_contig14194.3254.1 vs. uniprot
Match: A0A448Z2Z1_9STRA (GTPase Der n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z2Z1_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.760e-69
Identity = 136/305 (44.59%), Postives = 191/305 (62.62%), Query Frame = 1
Query:   40 LSEEEEAEEPVQLALVGRPNVGKSSLLNAVLREDRALTGPTPGLTRDAVAVEWTWGGRAVRLVDTAGIRKSGRRDTTTPLEELAVNDSMNAIHKAQVVVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSDL----SGVSPGEYAKGVIRQVEDLMPDVRAPPVLSVCALDGSGVGSLMRAVIKARERWRARVPTAVLNRWLRKIVFLHPPPRDSTTGGACSLKYLTQVKRGPPEFRVFVNHLSIPADYQRYITKNLQKEFGFHGMQVRLSLKKSV--NVYDPEG---RGGSGKGRPKRKF 927
            ++++ E E+P+Q+A++GR NVGKS+L+N ++  +R L GPTPGLTRDA+AVEW W GR V+LVDTAGIRK  +R   + +E++AV D++ A+  A+V VLVLD  E  +++ EL++ + V  EGRALV+AANK DL    S  SP ++A  V  Q+E+ +P +R  PV+ +  L G GV  L+  V+ AR RW   + T +LNRWL ++     PP     G    LKY+ Q K  PP F +F N   +P  Y RY+TK+ Q  F   GM VRL +K S   N Y+ +    RGG G G  K +F
Sbjct:  300 INKDNEDEKPLQIAIIGRQNVGKSTLVNTLVENNRVLAGPTPGLTRDAIAVEWDWEGRRVQLVDTAGIRKLTKRIDDS-IEDMAVADALRAMKVAEVAVLVLDAEEMYIQRQELALCNAVLDEGRALVIAANKMDLLEMSSDYSPRDFAINVREQIEERIPILRNIPVVPMSGLSGKGVSELLPTVLDARNRWSRTMSTGLLNRWLAEVTTGSRPP--VVEGVRAKLKYIIQTKGRPPTFILFSNVSKLPDPYLRYLTKHFQDSFQLFGMPVRLVVKSSSKGNPYNEKSKKKRGGFGLGGRKARF 601          
BLAST of mRNA_Ecto-sp13_S_contig14194.3254.1 vs. uniprot
Match: A0A484E2R6_BRELC (GTPase Der n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2R6_BRELC)

HSP 1 Score: 235 bits (599), Expect = 2.620e-69
Identity = 125/264 (47.35%), Postives = 174/264 (65.91%), Query Frame = 1
Query:   70 VQLALVGRPNVGKSSLLNAVLREDRALTGPTPGLTRDAVAVEWTWGGRAVRLVDTAGIRKSGRRDTTTPLEELAVNDSMNAIHKAQVVVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSDLSGVSPGEYAKGVIRQVEDLMPDVRAPPVLSVCALDGSGVGSLMRAVIKARERWRARVPTAVLNRWLRKIVFLHPPPRDSTTGGACSLKYLTQVKRGPPEFRVFVNHLS-IPADYQRYITKNLQKEFGFHGMQVRLSLK 858
            ++LA+VGRPNVGKS+LLN ++R DR LTGP PG+TRD+V V WT+ GR ++LVDTAGIR+  +RD    +E L+V DS  AI  AQVV++V+D SE  L   +L+IA  V  EGRALV+ ANKSDL   S   +   + +++ D +  VR  P++ + AL G+G+  L+  V+KA +RW  R+ T  LNRWL+ +   HPPP  +  G   ++KY TQVK  PP F VFV+  S +P  YQR++   L++EF   G+  RL L+
Sbjct:  233 IKLAIVGRPNVGKSTLLNKIVRNDRVLTGPEPGVTRDSVEVPWTFQGRPIQLVDTAGIRRYSKRDHDDQIENLSVRDSFGAIDSAQVVLVVVDMSEPKLFHMDLTIAMRVIEEGRALVLVANKSDLVSTSVDFWMMQMQKELHDSLAQVRGVPIVPISALTGTGIKKLVPEVLKAYDRWDLRISTGRLNRWLKAMSRHHPPP--TIKGKTLNVKYATQVKARPPTFAVFVSKPSDVPESYQRFLLTQLREEFDMVGVPARLLLR 494          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14194.3254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH15_ECTSI6.320e-22698.49GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L... [more]
A0A7S2LTB8_9STRA1.720e-7747.86Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S0CBQ9_9STRA1.520e-7545.91Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A7S4W2G9_9STRA4.280e-7347.12GTPase Der n=2 Tax=Ditylum brightwellii TaxID=4924... [more]
A0A7S4N241_9STRA1.430e-7246.49GTPase Der n=2 Tax=Odontella aurita TaxID=265563 R... [more]
A0A6A4DZD2_9STRA2.270e-7248.35GTPase Der n=7 Tax=Phytophthora TaxID=4783 RepID=A... [more]
B8BRP6_THAPS1.040e-6945.56GTPase Der (Fragment) n=1 Tax=Thalassiosira pseudo... [more]
A0A7S1BMN0_9STRA1.170e-6945.73GTPase Der n=2 Tax=Corethron hystrix TaxID=216773 ... [more]
A0A448Z2Z1_9STRA1.760e-6944.59GTPase Der n=1 Tax=Pseudo-nitzschia multistriata T... [more]
A0A484E2R6_BRELC2.620e-6947.35GTPase Der n=1 Tax=Bremia lactucae TaxID=4779 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14194contigEcto-sp13_S_contig14194:87..4166 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score639.8
Seed ortholog evalue7e-181
Seed eggNOG ortholog2880.D8LH15
Model size996
KEGG koko:K03977
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.GTP binding
EggNOG OGsCOG0486@1,KOG1191@2759
Ec32 ortholog descriptionMEngA, mitochondrial EngA GTPase
Ec32 orthologEc-06_010850.1
Cds size996
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14194.3254.1prot_Ecto-sp13_S_contig14194.3254.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14194 87..4166 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462758.0392663-CDS-Ecto-sp13_S_contig14194:86..2911681462758.0392663-CDS-Ecto-sp13_S_contig14194:86..291Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14194 87..291 -
1681462758.0535955-CDS-Ecto-sp13_S_contig14194:760..9981681462758.0535955-CDS-Ecto-sp13_S_contig14194:760..998Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14194 761..998 -
1681462758.0635376-CDS-Ecto-sp13_S_contig14194:1707..18631681462758.0635376-CDS-Ecto-sp13_S_contig14194:1707..1863Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14194 1708..1863 -
1681462758.0738208-CDS-Ecto-sp13_S_contig14194:2270..23401681462758.0738208-CDS-Ecto-sp13_S_contig14194:2270..2340Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14194 2271..2340 -
1681462758.0855818-CDS-Ecto-sp13_S_contig14194:2869..29581681462758.0855818-CDS-Ecto-sp13_S_contig14194:2869..2958Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14194 2870..2958 -
1681462758.0981932-CDS-Ecto-sp13_S_contig14194:3436..35711681462758.0981932-CDS-Ecto-sp13_S_contig14194:3436..3571Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14194 3437..3571 -
1681462758.108698-CDS-Ecto-sp13_S_contig14194:4063..41661681462758.108698-CDS-Ecto-sp13_S_contig14194:4063..4166Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14194 4064..4166 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14194.3254.1

>prot_Ecto-sp13_S_contig14194.3254.1 ID=prot_Ecto-sp13_S_contig14194.3254.1|Name=mRNA_Ecto-sp13_S_contig14194.3254.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=332bp
QAAAEAGLESNRPLSEEEEAEEPVQLALVGRPNVGKSSLLNAVLREDRAL
TGPTPGLTRDAVAVEWTWGGRAVRLVDTAGIRKSGRRDTTTPLEELAVND
SMNAIHKAQVVVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSDLS
GVSPGEYAKGVIRQVEDLMPDVRAPPVLSVCALDGSGVGSLMRAVIKARE
RWRARVPTAVLNRWLRKIVFLHPPPRDSTTGGACSLKYLTQVKRGPPEFR
VFVNHLSIPADYQRYITKNLQKEFGFHGMQVRLSLKKSVNVYDPEGRGGS
GKGRPKRKFGKKGRLLPLPPSPTRYRPGSHK*
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mRNA from alignment at Ecto-sp13_S_contig14194:87..4166-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14194.3254.1 ID=mRNA_Ecto-sp13_S_contig14194.3254.1|Name=mRNA_Ecto-sp13_S_contig14194.3254.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4080bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14194:87..4166- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGCGGCAGCCGAGGCGGGGTTGGAGTCCAACCGTCCCCTGTCAGAGGA AGAAGAGGCGGAGGAACCGGTTCAGCTGGCGCTGGTTGGCCGACCGAACG TTGGTAAGTGGACGAGGTGATCTCGTCTGTCGCGGGATCACGACAATGGC CGGCTAGCCAAGCTGTTAGCGCTTCAGCGCGGCGGTTGCAAGGCCGTCGA TGGAAGACTTTGCTTCGTTTGCGCTTGGAGTTTGGTAGGTCGATCTTTCG GACGTGTCGGGGTTTTGCGGGGGCTATCACCCCTCTTTCGAATCTTCCCC GTTTTTTATCCATGATCATGAGTTGGCCGTCGCTGCTATGGTGTGTTGCT GTTGAGGTTCTGCCGTTGTTGTTTCCGTTGGTGTTGCTGTTGTTTTTTTG TGTTTGTCAACCTCGTTGTTGTTGTCATCGTCCTATAATAGCTATAATAG CTGTGGTGACCCTCGTCGCTAGTTTTCTACATCAGGGAGACCATCGCTTG TTGGAAACGTCATCGTTCCTGTCGTTTTGGTGACGTCATCTTGCCGTTGA TGTTGTTGTCACCATAGTTGTCACCCTTCGTCCTGACTGCTCCAGGGAAG TCGTCGCTGCTTAATGCGGTGCTGCGCGAGGACAGGGCGTTGACCGGACC GACGCCTGGGCTCACCCGCGACGCCGTGGCGGTGGAATGGACTTGGGGAG GGAGGGCTGTCCGGCTGGTGGACACTGCTGGTGGGTTGGGTATTGTAGCG GTGTGCGAATAGCTTCTGCTGACAATTTTGCGCTGTGTTGTGCCCCGGTG CTGTGTTGGCACGTATGCATTATAGATCATCGTCAACACTGAGTTTTGGC CTGTGGACAAAGAGCGCGAAGAAACAAGCCGCCGCTGGTGTCGTGTAGTT CGCTAGGATGAGAAGATGCTCTTATCGGTCGTGGTGGAAACTAGAGAGCA GGTTGAAAACGTTCGGCTTTGGAACAACCCCTCTCTGCAAATGCCTCCAC GGCTCGGCAGTTTCCGCGTCCCTCCGTCCAGATTTTGAAAACGTAGGTCG GACTAGTGTTAGGAAACATGCTGCTTGCGGCGTGCCCATTTTGATTCAAC TCTTGTTCGGATGGTGTTTTAGCGGACCAACGGTAGGAAACATGTTGCTT GCTGCACCCATTGTAATTCGACCCCTGCTGGGATGGTGTTCAAACGTCTG TGCTTCAGGTATTAGGAAAAGCGGCAGGCGCGACACTACCACTCCCCTCG AAGAGCTGGCGGTAAACGATTCCATGAACGCCATTCATAAGGCCCAGGTA TATACGGAGTATGCTTCTGTTTCTGTAGGTGTTCCGTGGAAGACGTTCCT GGTCGGTTGAACTGTCCGAATGGCCCCCCACGAGCCCGGGAAGGTCTTGC GGGACAACCAGGGATGAAATGATCGCCGTAGAGGTTGTATCATCCGATAT GCGCGTTCGGCGGGCGTGATCACATGTCTTGCATGGTTGTTTTATCATAG AGCATGTGTAATGCCTTACGCTGGCGTGGTCTCCTTGGTTGTTTGCTGTG TGTGCTTGTGCACCTGGATTGCCAGACAAGCGAGCTAAAGGGCCCGCTGT CTGTTTCTCGCCTCGCCACTGTCCATGCATGTGTATTCGTACCGCTGCTG CAGGCAGCATGGCATTACCGTGCCTCGTTTTCACGCAGTTTGCCACTGCA GCACCCCTCGTGTAGTATTTAGGGTTATCATGTGGCTACTCTTGCACATA TCGTTCTCTCGATCGATTGCTGGCACGAAAAGCCATGCCACAACCACACC ACCCGCCACGCCACCGTTGCACACAGGTGGTTGTGCTGGTCCTTGACGGC TCCGAAGGCATGCTTCGAAAGACAGAGCTGTCTATCGCCTCCATGGGTAA GTCAGCCGCTCTTGAAGACAAGGTTGTTTCTTTCATAATGTCCTTCCGTG GTTGTATTTTCTCAAAAGCATGCAAGGCAGAGACGGTCCCTTCCGTGGCT AAAGCGGCAGGAAAACGGGGGCGCATGAATTTTCAAAGGCATTTGTGTTT CCTTCTCGATACTGTGGCTGCAGCTTTTCAAATCTCGAACAAGCGTGTGT TTCCGCAAACACACGTCTTCCCATGTCAATCTTTCTCGCTCTCTCCCACC CTGTTTGTATGTCTGCCTGTCTGTCTGTCCACCCGTTTACCTGTCTTTGT CTGTCTGTCTGTCTCTCTGCCCCTCTATATGATCTCTCTGTGTCTGTCTG TCTGTCTCTCTCTGTTTATCCATCTCTACCTGCATCTCTATCTCTCCCCC AAGTCGCGACGGAGGGTCGGGCGCTGGTCGTGGCCGCAAACAAGTCCGAC CTTTCCGGGGTGTCCCCGGGAGAGTACGCGAAGGGAGTGATCCGACAAGT GGAGGATCTTATGCCGGACGTTCGGGCACCACCGGTCTTGTCGGTGTGTG CTCTAGACGGTGAGCATCACANNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCA TATTCTCCGTCCCCCACCCGCGCGACTGACCATCAGTGATTGGTCCTGTG GGAACAATGCTCCGTTCTCTCCATGACCCGTGGTCAATGGTCTAGAAACT ACGACATGCAAAACAATGAGTAAGTCATCCACGTAAATACCGATCCTGCA TCGAAACAAAAAAATCAGGCTCAGGCGTGGGGAGCCTGATGCGAGCGGTC ATCAAGGCACGGGAGCGGTGGCGAGCTCGCGTACCGACGGCCGTCCTGAA CCGCTGGCTCCGAAAGATCGTTTTCTTGCACCCGCCCCCCCGCGACAGCA CGACGGGCGGCGCCTGCTCCCTCAAGTACCTCACCCAGGTCAAGAGGGGG CCGCCGGAGTTCAGGGTGTTCGTGAACCATCTCTCGATCCCGGCGGATTA CCAACGGTGAGGGATGCTTGTTGGTTTTTTTGGGCGTGTGGGGTGGCACG ATTGAGAGCAATCTTTCTTTGCGTGAACAGTCAACTCTTGTGGTTGTGGT CTGGGGGGTTGGAGACGAATCTTTGCTCGAAACTCGTACGAAGGGCGCAA GAGGGGCGTGTGTTTTCATCGGTGTTTTTGCGGGCAGGACGGGGTCTGCT TGATGGCTATTGGGGAAGGCTGCCAGTGCCATACGCCGTGAAGACGGAAA TGTCTCTCTGCCACGACATTCAAACAGCCTCATCGTGATCACGAGTTGTC ATGCCTATAGAGAGGTCCAAGAAGTGTTGCTGGGTTATAATGCACATGTA TGCGTGAGAGGTTTGTATTGGCTGGCTGGGGGTCATCCTGTCGTTTCCCC CGGAACCAACCTGAAGAGTAACCTTTTTTTGCGGATGGACGTCCTTCTCC TTTCCCCCTCGGCCGGCAATCACAGATACATCACCAAAAACTTGCAGAAG GAGTTCGGTTTCCACGGCATGCAGGTCCGCCTGTCCCTCAAGAAGTCCGT CAACGTCTACGACCCGGAGGGGAGGGGCGGGTCCGGCAAGGGCCGGCCTA AGCGCAAGTTTGGCAAGAAGGGAAGGCTGCTCCCTCTACCCCCTTCACCA ACACGCTACCGACCAGGGTCGCACAAATGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14194:87..4166-

>mRNA_Ecto-sp13_S_contig14194.3254.1 ID=mRNA_Ecto-sp13_S_contig14194.3254.1|Name=mRNA_Ecto-sp13_S_contig14194.3254.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=996bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14194:87..4166- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGCGGCAGCCGAGGCGGGGTTGGAGTCCAACCGTCCCCTGTCAGAGGA
AGAAGAGGCGGAGGAACCGGTTCAGCTGGCGCTGGTTGGCCGACCGAACG
TTGGGAAGTCGTCGCTGCTTAATGCGGTGCTGCGCGAGGACAGGGCGTTG
ACCGGACCGACGCCTGGGCTCACCCGCGACGCCGTGGCGGTGGAATGGAC
TTGGGGAGGGAGGGCTGTCCGGCTGGTGGACACTGCTGGTATTAGGAAAA
GCGGCAGGCGCGACACTACCACTCCCCTCGAAGAGCTGGCGGTAAACGAT
TCCATGAACGCCATTCATAAGGCCCAGGTGGTTGTGCTGGTCCTTGACGG
CTCCGAAGGCATGCTTCGAAAGACAGAGCTGTCTATCGCCTCCATGGTCG
CGACGGAGGGTCGGGCGCTGGTCGTGGCCGCAAACAAGTCCGACCTTTCC
GGGGTGTCCCCGGGAGAGTACGCGAAGGGAGTGATCCGACAAGTGGAGGA
TCTTATGCCGGACGTTCGGGCACCACCGGTCTTGTCGGTGTGTGCTCTAG
ACGGCTCAGGCGTGGGGAGCCTGATGCGAGCGGTCATCAAGGCACGGGAG
CGGTGGCGAGCTCGCGTACCGACGGCCGTCCTGAACCGCTGGCTCCGAAA
GATCGTTTTCTTGCACCCGCCCCCCCGCGACAGCACGACGGGCGGCGCCT
GCTCCCTCAAGTACCTCACCCAGGTCAAGAGGGGGCCGCCGGAGTTCAGG
GTGTTCGTGAACCATCTCTCGATCCCGGCGGATTACCAACGATACATCAC
CAAAAACTTGCAGAAGGAGTTCGGTTTCCACGGCATGCAGGTCCGCCTGT
CCCTCAAGAAGTCCGTCAACGTCTACGACCCGGAGGGGAGGGGCGGGTCC
GGCAAGGGCCGGCCTAAGCGCAAGTTTGGCAAGAAGGGAAGGCTGCTCCC
TCTACCCCCTTCACCAACACGCTACCGACCAGGGTCGCACAAATGA
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