prot_Ecto-sp13_S_contig14190.3253.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14190.3253.1
Unique Nameprot_Ecto-sp13_S_contig14190.3253.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length714
Homology
BLAST of mRNA_Ecto-sp13_S_contig14190.3253.1 vs. uniprot
Match: D8LSH3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH3_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 8.510e-89
Identity = 490/726 (67.49%), Postives = 504/726 (69.42%), Query Frame = 0
Query:   15 FGNDDGSGRPRSMERLLKAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXGSAIDGDLERGGSVEVLAKTPSMSNRGGSGAGFELPEKVVRAFGDGXXXXXXXXXXXXXXGQEVLSRRRKSRERARAMGMLAKGNXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXAVVDGGGERGSADSQMMLSTLLREAQAKEKAMLREIEEMRAREQTMRGELVNGLAGARKIYAQLKQGKQREQELRATNSILQAKIASSSSSSSYS-------------------------------TGEGERQAGRATAPRDPEKVPSSSKNGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMTTPRGAVPFKPFATRPPTAXXXXXXXXXXXXXEMLVNGADDAQRQPAAAAAAGLGRHDGACGG--DVMASATLVKDKVGTVSDEPSSEV---AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRREIVEWERRVSQVLSIDNIPHHALDSTGDSLASPEDPDAAADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEKSNSKNDVPRGSPTEAGGGLGVSEGERAXXXXXXXXXXXXXXXXXXXXNESIGSKGRKSKGHRRRSGEGGGGRDRDGKERVSLELKKE 704
            FGNDDGSGRPRSMERLLK   XXXXXXXXXXXXXXXXXXXXXXXXXXX            XXXXXVXXXX   IDGDLERGGSVEVLAKTPS+SN  G G GFELPEKVVRAFGDG              GQ+VLSRRRKSRERARAMGMLA   XXXXXXXX XXXXXXXXXXXXXXXXXX  XX        RGSADSQM+LSTLLREAQAKEKAMLRE+EEMRAREQTMRGELVNGLAGARKI+AQLKQGKQREQELRATNSILQAKIAS                                       T   +RQ G +  P       ++  +GA         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     PRGAVPFKPFATRPPT XXXXXXXXXXXXX                                 D+MASATLVKDKVGTVSDEPSSEV   AXXXXXXXXXXXXXXXXXXXXX           SRREIVEWERRVSQVLSID+IP HALDSTGDSLASPEDP A A +     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     LGV E E  XXXXXXXXXXXXXXXXX   NESIGSKGRKSKGHRRRSGEGG GRDRDGKERVS +LKKE
Sbjct:   75 FGNDDGSGRPRSMERLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDESVAGDSLSSXXXXXVXXXXXXXIDGDLERGGSVEVLAKTPSLSN--GGGVGFELPEKVVRAFGDGGGAAPPGGD-----GQDVLSRRRKSRERARAMGMLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAXXXXXXXXXXRGSADSQMLLSTLLREAQAKEKAMLREMEEMRAREQTMRGELVNGLAGARKIFAQLKQGKQREQELRATNSILQAKIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTSGSDRQPGASMPPSYSSVTSATPFSGAAGTGAGTDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK--------------------PRGAVPFKPFATRPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLMASATLVKDKVGTVSDEPSSEVPLAAXXXXXXXXXXXXXXXXXXXXXGSSGNPLQSQESRREIVEWERRVSQVLSIDSIPRHALDSTGDSLASPEDPAAVAGSGAAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------LGVREAEXXXXXXXXXXXXXXXXXXX---NESIGSKGRKSKGHRRRSGEGGXGRDRDGKERVSQDLKKE 761          
BLAST of mRNA_Ecto-sp13_S_contig14190.3253.1 vs. uniprot
Match: A0A6H5L8P8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8P8_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 2.120e-87
Identity = 456/723 (63.07%), Postives = 466/723 (64.45%), Query Frame = 0
Query:   13 MAFGNDDGSGRPRSMERLLKAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXGSA-IDGDLERGGSVEVLAKTPSMSNRGGSGAGFELPEKVVRAFGDGXXXXXXXXXXXXXXGQEVLSRRRKSRERARAMGMLAKGNXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXAVVDGGGE-------RGSADSQMMLSTLLREAQAKEKAMLREIEEMRAREQTMRGELVNGLAGARKIYAQLKQGKQREQELRATNSILQAKIASSSSSSSYSTGEGERQAGRATAPRDPEKVPSSSKNGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------AMTTPRGAVPFKPFATRPPTAXXXXXXXXXXXXXEMLVNGADDAQRQPAAAAAAGLGRHDGACGG---DVMASATLVKDKVGTVSDEPSSEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------SRREIVEWERRVSQVLSIDNIPHHALDSTGDSLASPEDPDAAADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEKSNSKNDVPRGSPTEAGGGLGVSEGERAXXXXXXXXXXXXXXXXXXXXNESIGSKGRKSKGHRRRSGEGGGGRDRDGKERVSLELKKE 704
            MAFGNDDGSGRPRS+ERLLKA  XXXXX                                  XXXXX XXXX    IDGD ERGGSVEVL KTPS  N GG GAGFELPEKVVRAFGDGXXXXXXXXXXXXXX                         XXXXXXXX XXXXXXXXXXXXXXXXXXXXXX  V            RGSADSQM+LST LREA+AKEKAMLRE+EEMRAREQTMRGELVNGLAGARKIYAQLK+G+QREQELRATNSILQAKIASSS SS   TGEGERQ G A  PR PEK+PSSSKNGA                                     XXXXXXXXXXXXXXXXXXX              AMTTPRGAVP KPFATRPPTA             E+ VNGADD QRQ                     D+MASATLVKDKVGTVSD+PSSEV   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        SRREIVEWE                L STGDSLASPEDP      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  K    NDVPRGSP EAGGGLGVSEGERA                    NESIGSK RKSKGHRRRS          GKERVSLELKKE
Sbjct:  640 MAFGNDDGSGRPRSVERLLKAXXXXXXXTAEERVGEGAMAASAATAPATTSEDESVAGDSLSXXXXXXXXXXXXXXIDGDSERGGSVEVLVKTPSQRNGGGGGAGFELPEKVVRAFGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDVGAXXXXXXXXXXRGSADSQMLLSTRLREARAKEKAMLREMEEMRAREQTMRGELVNGLAGARKIYAQLKEGRQREQELRATNSILQAKIASSSFSS---TGEGERQEGGAVVPRTPEKMPSSSKNGAAATAATSGSDRHPGASMPPSHSSATSATPFSGAAGTGXXXXXXXXXXXXXXXXXXXIAVLSSSRSTSPPPAMTTPRGAVPLKPFATRPPTAATVSTAAAADRGGELEVNGADDTQRQXXXXXXXXXXXXXXXXXXXXXDLMASATLVKDKVGTVSDKPSSEVPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPQSQESRREIVEWE---------------VLSSTGDSLASPEDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK----NDVPRGSPPEAGGGLGVSEGERAAAAIKRENSG----------NESIGSKSRKSKGHRRRSXXXXXXXXXXGKERVSLELKKE 1330          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14190.3253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSH3_ECTSI8.510e-8967.49Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5L8P8_9PHAE2.120e-8763.07Protein kinase domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 222..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14190contigEcto-sp13_S_contig14190:197..4133 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14190.3253.1mRNA_Ecto-sp13_S_contig14190.3253.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14190 197..4133 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14190.3253.1 ID=prot_Ecto-sp13_S_contig14190.3253.1|Name=mRNA_Ecto-sp13_S_contig14190.3253.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=714bp
LQAAEHVAAAAAMAFGNDDGSGRPRSMERLLKAAEAAAAAATVEEREGGG
AMAGSAAAATTSEDESVAGGSLSSGDGGGVSDGGGSAIDGDLERGGSVEV
LAKTPSMSNRGGSGAGFELPEKVVRAFGDGGGGGGSGAGPPGGDGQEVLS
RRRKSRERARAMGMLAKGNNSNSRNQGGGIQQRGENPNGDGRGGGVGAAA
AVVDGGGERGSADSQMMLSTLLREAQAKEKAMLREIEEMRAREQTMRGEL
VNGLAGARKIYAQLKQGKQREQELRATNSILQAKIASSSSSSSYSTGEGE
RQAGRATAPRDPEKVPSSSKNGAATTAATSGSDRHPGASMPPSYSSAIAA
PPFSGAAGTGGSTGGGGVAVSSSSRSASPPPAMTTPRGAVPFKPFATRPP
TAATAATAAAAGSSGEMLVNGADDAQRQPAAAAAAGLGRHDGACGGDVMA
SATLVKDKVGTVSDEPSSEVAAAAVAAAAAGTKPEERGGGSSGGSGSPPQ
SQQSRREIVEWERRVSQVLSIDNIPHHALDSTGDSLASPEDPDAAADTAA
AAAGSSAAADEFAQQQKKKSPGAADNNGAEDGRDQRSRGGDPPAAAAAAA
AEITAAAVAPSDGGNEKSNSKNDVPRGSPTEAGGGLGVSEGERAAAAAAA
IKRENSGGGASSGGNESIGSKGRKSKGHRRRSGEGGGGRDRDGKERVSLE
LKKEVGCLVGRVH*
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