mRNA_Ecto-sp13_S_contig1419.3251.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1419.3251.1 vs. uniprot
Match: A0A6H5KBP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP4_9PHAE) HSP 1 Score: 555 bits (1430), Expect = 5.590e-186 Identity = 436/568 (76.76%), Postives = 451/568 (79.40%), Query Frame = 2
Query: 818 MSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDPPAPPRPCSSSTANKKRAGANSTHVGKERVSSXXXXXXXXXXXXXXXXXXKGGDVDGAGGRSXXXXXXXXXXXXXXXXXXXXXXXXGDSTGCDGGKSNGXXXX--VDGRDDRSCEGSNASSATGFGTAGXXXXXXXXXXXXXXXXXXXXXDAGVGRSAAMEALMVAARGERTACGGSGDEGHDGGDPWNNSNCNRGRAEAGARWKRGWAPAGGEGAERRGQXXXXXXXXXXAVAEPGRKAAKRPKGGQARRKTDMARAEAGMSVLAQAAGLLDIEDSVEAADGNSNSVGGGXXGDAGRNGPDANVMLATDLVDCRSNFGGSGXXXXXRYAGQY-YGRLQTNGHNGNAFIDHGSTPPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------CGGRTAGTADAFPVGAQGASSAGHARSIARNSEYYHVGGQSSYGGESGGGERASWGGLPSSSTSWSSSQRWSLHSVPGPWRPYLTGQDGGN 2395
MSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDP APPRPCSSS+A KK+AGANSTHVGKE+ XXXXXXXXXXXXXXX KGGDVDG GGRS XXXXXXXXXXXXXXXXX XXXX VDGRDDR+ +GSNASSATGFGTA XXXXXXXXXXXXXXXXXXX DAG GRSAAMEALMVAARGERTACGGSGDEGHDGGDPWN SNC R AEAGARWKRGW P GGEGAERRG+ AVAEPGRKAAKRPKGGQARRKTD+ARAEAGMSVLAQAAGLLDIEDSVEAADGNSN++GGG DAG+NG DANVMLA DLVDCRSNFGGSGXXXXX YGR QT+GHNG A+IDHGSTP XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CGGRTA ADAFPVGA+GASSA A SI RNSEYYHVGG+SSYGGESGGGERASWGGLP SS+S SS QRWSLHSVPGPWRPYLTGQDGGN
Sbjct: 1 MSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDPLAPPRPCSSSSATKKKAGANSTHVGKEKXXXXXXXXXXXXXXXXXXSKVKGGDVDGTGGRSKVGSGRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGRDDRTRKGSNASSATGFGTAAGXXXXXXXXXXXXXXXXXXX-DAGFGRSAAMEALMVAARGERTACGGSGDEGHDGGDPWNTSNCKRDGAEAGARWKRGWTPVGGEGAERRGRQETAGGSGGGAVAEPGRKAAKRPKGGQARRKTDIARAEAGMSVLAQAAGLLDIEDSVEAADGNSNNIGGGGGCDAGQNGLDANVMLAIDLVDCRSNFGGSGXXXXXXXXXXXXYGRHQTSGHNGAAYIDHGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGXXXAAGRASSYGGTXXXCGGRTAENADAFPVGARGASSASDATSIGRNSEYYHVGGKSSYGGESGGGERASWGGLPWSSSSSSSPQRWSLHSVPGPWRPYLTGQDGGN 567
BLAST of mRNA_Ecto-sp13_S_contig1419.3251.1 vs. uniprot
Match: D7FZ02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ02_ECTSI) HSP 1 Score: 440 bits (1132), Expect = 1.060e-142 Identity = 332/615 (53.98%), Postives = 343/615 (55.77%), Query Frame = 2
Query: 395 MNGSRTTSAELWSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSECRERWDYVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDPPAPPRPCSSSTANKKRAGANSTHVGKERVSSXXXXXXXXXXXXXXXXXXKGGDVDGAGGRSXXXXXXXXXXXXXXXXXXXXXXXXGDSTGCDGGKSNGXXXXVDGRDDRSCEGSNASSATGFGTAGXXXXXXXXXXXXXXXXXXXXXDAGVGRSAAMEALMVAARGERTACGGSGDEGHDGGDPWNNSNCNRGRAEAGARWKRGWAPAGGEGAERRGQXXXXXXXXXXAVAEPGRKAAKRPKGGQARRKTDMARAEAGMSVLAQAAGLLDIEDSVEAADGNSNSVGGGXXGDAGRNGPDANVMLATDLVDCRSNFGGSGXXXXXRYAGQYYGRLQTNGHNGNAFIDHGSTPPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGGRTAGTADAFPVGAQGASSAGHARSIARNSEYYHVGG 2239
M+GSRTTSAELWSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSECRERW+YVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDPPAPPRPC+SSTAN XX + A R S G G +AA A RG G+G RGR G EG RR Q XXXXXXXXX E A + +GG+ RR GL GG G + NFG XXXXXRYAGQYYGRLQTNGHNG AFIDHGSTPPGS XXXXXXXXXXXXXX CGGRTAGTADAFPVGA+GASSAG A SI RNSEYYHVGG
Sbjct: 1 MSGSRTTSAELWSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSECRERWNYVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDPPAPPRPCTSSTANXXXXXXXXXXXXXXXXXXXXMP-------------------ESAAPRQWRR-----------------------------------------------------SWLPLGARGPPV-----------------------EAAAERVTTAATRGTIAIATGAGRR--------------RGRT-------------GSEGGPRR-QEXXXXXXXXXXPREEVAAAPSQSRGGKRRR------------------GLR----------------GGRLVG--------------------KRNFG---XXXXXRYAGQYYGRLQTNGHNGAAFIDHGSTPPGSASPLPSGPASGXXXXXXXXXXXXXXTGGGCGGRTAGTADAFPVGARGASSAGDATSIGRNSEYYHVGG 435
BLAST of mRNA_Ecto-sp13_S_contig1419.3251.1 vs. uniprot
Match: D8LKP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP8_ECTSI) HSP 1 Score: 179 bits (453), Expect = 1.680e-42 Identity = 101/194 (52.06%), Postives = 126/194 (64.95%), Query Frame = 2
Query: 335 ERRTIIPPRGGTSLEDKAAS--MNGSRTTSAELWSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSEC-----RERWDYVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLA 895
+RR+I P G +E AA + G+R W R+ D +LR+ VLR + W +++T + P EC +RW VK PVKGPWS EED LK LVDE+G KKW+L+A FPGRSGKQCRERW NH+D RVKK W+ ED LCEAQ +LGNKWSE+SK+L GR+ENA+KNRFNS+ K LA
Sbjct: 56 KRRSIPLPPVGPGIEVTAAEAMILGAR------WDREMDEMLREGVLRYGAD--WEEVSTHM-------APHECPKEEVEKRWQMVKANPVKGPWSPEEDSLLKVLVDEYGRKKWSLIATQFPGRSGKQCRERWLNHLDTRVKKSAWTGAEDMKLCEAQGRLGNKWSEISKLLPGRAENAVKNRFNSIITKRLA 234
BLAST of mRNA_Ecto-sp13_S_contig1419.3251.1 vs. uniprot
Match: A0A835Z962_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z962_9STRA) HSP 1 Score: 161 bits (408), Expect = 4.100e-42 Identity = 79/156 (50.64%), Postives = 110/156 (70.51%), Query Frame = 2
Query: 428 WSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGA---VTPSECRERWDYVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAK 886
W++D D LR+ VLR W ++ ++ S V EC +RW + + PVKGPW+SEEDD L+ LV ++G+KKW+ +A PGR+GKQCRERW NH+D RV K W+ EED++L +AQR+LGN+WS++S++L GR+ENA+KNRFNSL K
Sbjct: 6 WTKDMDDTLREGVLRYGMS-EWPKVMAHMQVQSHVLEDVESLECHQRWQIICDLPVKGPWASEEDDVLRALVKQYGNKKWSHVATGLPGRTGKQCRERWLNHLDIRVMKTSWTPEEDELLFDAQRELGNQWSKISRMLPGRAENAVKNRFNSLITK 160
BLAST of mRNA_Ecto-sp13_S_contig1419.3251.1 vs. uniprot
Match: F0YHL4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHL4_AURAN) HSP 1 Score: 152 bits (384), Expect = 3.950e-39 Identity = 78/159 (49.06%), Postives = 108/159 (67.92%), Query Frame = 2
Query: 428 WSRDTDLVLRDLVLR---SSEEINWNQIATAIEWDSGAVTPSECRERWD-YVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGL 892
W+ + D VLR+ VLR S+ E + ++ EC RW+ V+ T VKGPW EED L++LV++FG K+W L+A PGR+GKQCRERW NH+D RV K +W+ +ED +L EAQ+++GNKWSE++++L GR+ENA+KNRFNSL K L
Sbjct: 1 WTEEEDAVLREGVLRFGTSAWEDVSRHLLPPVQGGPQKRQAPECEARWEAVVRHTAVKGPWLPEEDSLLRQLVNKFGPKRWALIASHIPGRAGKQCRERWLNHLDTRVIKSDWTPDEDAVLLEAQQRVGNKWSEIARLLPGRAENAVKNRFNSLITKRL 159
BLAST of mRNA_Ecto-sp13_S_contig1419.3251.1 vs. uniprot
Match: W7TQR3_9STRA (Myb-related protein a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQR3_9STRA) HSP 1 Score: 162 bits (410), Expect = 5.680e-38 Identity = 82/152 (53.95%), Postives = 108/152 (71.05%), Query Frame = 2
Query: 428 WSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSECRERWDYVKETPVKGPWSSEEDDHLKRLVDEFGS--KKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSL 877
W+ + D +LR+ +LR+ + W I + S + EC RWD +K+ PVKGPWS EED L+ LV +G KKW++LA+ PGR+GKQCRERW NH+D VKKGEW ED ILC+AQR+LGNKWSE++K+L GR+EN++KNRFNSL
Sbjct: 149 WTSEQDDLLREAILRNGTD-KWAAITEHMLPFS--FSSDECAVRWDEIKDVPVKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSL 297
BLAST of mRNA_Ecto-sp13_S_contig1419.3251.1 vs. uniprot
Match: A0A7S2WV82_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV82_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.610e-37 Identity = 84/175 (48.00%), Postives = 117/175 (66.86%), Query Frame = 2
Query: 422 ELWSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSECRERWDYVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKA 946
+ W + D VLR+ VLR NW +++ + S + +C RW VK PVKGPW EED L+ LV +FG K+W+ +A PGR+GKQCRERW NH+D VKK +W+ EED+IL EAQR++GN+WSE++++L GR+ENA+KNR+NSL K L M A + + A EE++
Sbjct: 135 QAWGEEEDAVLREAVLRFGVS-NWPAVSSHM-LPSCHRSADQCEIRWRVVKNNPVKGPWLPEEDQLLRDLVGQFGPKQWSKIAEKIPGRAGKQCRERWLNHLDSSVKKSDWTPEEDKILLEAQRRVGNRWSEIARMLPGRAENAVKNRYNSLITKKLT-MLATQEEQRGAAEERS 306
BLAST of mRNA_Ecto-sp13_S_contig1419.3251.1 vs. uniprot
Match: A0A196SGZ8_BLAHN (Transcriptional activator Myb n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGZ8_BLAHN) HSP 1 Score: 156 bits (394), Expect = 7.520e-37 Identity = 85/197 (43.15%), Postives = 124/197 (62.94%), Query Frame = 2
Query: 395 MNGSRTTSAELWSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSECRERWDYV-KETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAK-GLAEMRANELMSKLAPEEKAALLNIDSDPPA 979
M R + LW+R+ D ++R+ V R +W ++ + + +TP +C+ERW+ V ++ VKGPWS EED L+ LV++FG KKW+ +A GR GKQCRERW NH+ V K W+ EED+IL AQ Q+GNKWS +SK+L GRSENA+KNR+NS+ ++ G+ + R +++ KA LL + P A
Sbjct: 1 MQDQRQADSSLWTRELDEMIREAVARYGSN-DWVKVCQKLR--NQHITPEQCQERWETVLRDQTVKGPWSEEEDAILRSLVEKFGPKKWSTIASYINGRIGKQCRERWLNHLSPTVTKDVWTEEEDEILINAQIQMGNKWSYISKLLPGRSENAVKNRYNSIASRNGVRKKRLGTFVTR--GNSKANLLRLQVPPKA 192
BLAST of mRNA_Ecto-sp13_S_contig1419.3251.1 vs. uniprot
Match: A0A8J2SUI4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUI4_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.580e-36 Identity = 87/187 (46.52%), Postives = 121/187 (64.71%), Query Frame = 2
Query: 419 AELWSRDTDLVLRDLVLRSSEEINWNQIAT----AIEWDSGAVTPSECRERWDY-VKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGL-----AEMRANELMSKLAPEEKAA 949
A+ W+ + D VLR+ VLR +W+++A I TP +C+ RWD V+ VKGPW EED+ L++LV +FG K+W L+A PGR+GKQCRERW NH+D RV K +W+ +ED IL +AQ+++GNKWSE+++ L GR+ENA+KNRFNSL K L A+ R + S+ E AA
Sbjct: 57 ADPWTEEEDAVLREGVLRFGTG-DWSKVARHLLPPINGGPQKRTPDDCQARWDAAVRHAAVKGPWLPEEDNLLRQLVAKFGPKRWALIASHIPGRAGKQCRERWLNHLDSRVVKSDWTPDEDAILLDAQQRVGNKWSEIARGLPGRAENAVKNRFNSLITKRLTHGLEAQARRRDRQSESRGEADAA 242
BLAST of mRNA_Ecto-sp13_S_contig1419.3251.1 vs. uniprot
Match: K8YTL3_NANGC (V-myb myeloblastosis viral oncogene-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YTL3_NANGC) HSP 1 Score: 157 bits (398), Expect = 2.760e-36 Identity = 73/113 (64.60%), Postives = 91/113 (80.53%), Query Frame = 2
Query: 545 ECRERWDYVKETPVKGPWSSEEDDHLKRLVDEFGS--KKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSL 877
EC RWD +K+ PVKGPWS EED L++LV +G KKW++LA+ PGR+GKQCRERW NH+D VKKGEW ED ILC+AQR+LGNKWSE++K+L GR+EN++KNRFNSL
Sbjct: 56 ECAVRWDEIKDVPVKGPWSVEEDALLQQLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSL 168 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1419.3251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1419.3251.1 >prot_Ecto-sp13_S_contig1419.3251.1 ID=prot_Ecto-sp13_S_contig1419.3251.1|Name=mRNA_Ecto-sp13_S_contig1419.3251.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=692bp MNGSRTTSAELWSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSback to top mRNA from alignment at Ecto-sp13_S_contig1419:370..7886- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1419.3251.1 ID=mRNA_Ecto-sp13_S_contig1419.3251.1|Name=mRNA_Ecto-sp13_S_contig1419.3251.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7517bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1419:370..7886- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1419:370..7886- >mRNA_Ecto-sp13_S_contig1419.3251.1 ID=mRNA_Ecto-sp13_S_contig1419.3251.1|Name=mRNA_Ecto-sp13_S_contig1419.3251.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2076bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1419:370..7886- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |