prot_Ecto-sp13_S_contig14189.3250.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14189.3250.1
Unique Nameprot_Ecto-sp13_S_contig14189.3250.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length45
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14189.3250.1 vs. uniprot
Match: D8LLB8_ECTSI (TSPc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB8_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.440e-18
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 
Query:    1 MISTTFDFDQEQFDLARKKMKACPPMEASRLELKGAAGASSSSL 44
            M+STTFDFDQEQFDLARKKMKACPPMEASRLELKGAAGASSSSL
Sbjct: 1317 MVSTTFDFDQEQFDLARKKMKACPPMEASRLELKGAAGASSSSL 1360
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BLAST of mRNA_Ecto-sp13_S_contig14189.3250.1 vs. uniprot
Match: A0A6H5JU13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU13_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 9.280e-18
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0 
Query:    1 MISTTFDFDQEQFDLARKKMKACPPMEASRLELKGAAGASSSSL 44
            M+STTFDFDQEQFDLARKKMKACPPMEASRLELKGAAG SSSSL
Sbjct:  503 MMSTTFDFDQEQFDLARKKMKACPPMEASRLELKGAAGVSSSSL 546
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14189.3250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLB8_ECTSI1.440e-1897.73TSPc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JU13_9PHAE9.280e-1895.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14189contigEcto-sp13_S_contig14189:3094..3228 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14189.3250.1mRNA_Ecto-sp13_S_contig14189.3250.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14189 2149..4211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14189.3250.1 ID=prot_Ecto-sp13_S_contig14189.3250.1|Name=mRNA_Ecto-sp13_S_contig14189.3250.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=45bp
MISTTFDFDQEQFDLARKKMKACPPMEASRLELKGAAGASSSSL*
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