mRNA_Ecto-sp13_S_contig14188.3248.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14188.3248.1
Unique NamemRNA_Ecto-sp13_S_contig14188.3248.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14188.3248.1 vs. uniprot
Match: A0A6H5JQI0_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQI0_9PHAE)

HSP 1 Score: 553 bits (1426), Expect = 2.180e-187
Identity = 254/259 (98.07%), Postives = 258/259 (99.61%), Query Frame = 3 
Query:  258 SGLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDSMDPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYVMVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKERRDNEEHSSGGASDKIKST 1034
            +GLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDS+DPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYV+VLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKERRDNEE SSGGA+DKIKST
Sbjct:   79 TGLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDSLDPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYVVVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKERRDNEERSSGGAADKIKST 337
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14188.3248.1 vs. uniprot
Match: A0A835YYM0_9STRA (Stearoyl-CoA desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM0_9STRA)

HSP 1 Score: 448 bits (1153), Expect = 3.060e-146
Identity = 203/253 (80.24%), Postives = 220/253 (86.96%), Query Frame = 3 
Query:  258 SGLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDSMDPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYVMVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKERRDNEEHSSGGAS 1016
            SGLGITGGVHRLWAHRSY+AHWSVRVF+MLINS+ANQGSIYHWSRDHRVHHK+SETDADPHNA+RGFFFAHMGWLYVKKHPEVI AGRTL ++DLE DP+VMFQD +DPWFALFMCF  P +VA  GWGE+FW GFWVAGALRY  VLH TW VNSAAHMFGDHPYD  SWP+ENP VSI A+GEGWHNWHHKYPFDYAASEFGV+ QFNPTK+ ID  A +GLV+ RKRA GAW KLKERRD  E  S   S
Sbjct:   88 SGLGITGGVHRLWAHRSYEAHWSVRVFLMLINSIANQGSIYHWSRDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPEVIAAGRTLDFSDLERDPVVMFQDRLDPWFALFMCFFFPGLVAKYGWGENFWVGFWVAGALRYCWVLHCTWCVNSAAHMFGDHPYD-NSWPAENPVVSILAVGEGWHNWHHKYPFDYAASEFGVAAQFNPTKLFIDACANVGLVSKRKRATGAWEKLKERRDEAEDGSADGS 339
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14188.3248.1 vs. uniprot
Match: A0A835YKG8_9STRA (Stearoyl-CoA desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKG8_9STRA)

HSP 1 Score: 438 bits (1126), Expect = 1.740e-142
Identity = 194/246 (78.86%), Postives = 215/246 (87.40%), Query Frame = 3 
Query:  258 SGLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDSMDPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYVMVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKERRDNEE 995
            +GLGITGGVHRLWAHRSYDAHW+VRV++MLINSMANQGSIYHW+RDHRVHHK+SETDADPHNA+RGFFFAHMGWLYVKKHP VI AGRTL ++DLE DP+VMFQD +DPWFALFMCF  P +VA  GWG++FW GFWVAGALRY  VLH TW VNSAAHMFGDHPYD  SWP+ENP VS+ ++GEGWHNWHHKYPFDYAASEFGV  Q+NPTK+ ID  A  GLVT RKRA GAW KLK+RRD  E
Sbjct:   79 TGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYD-ASWPAENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAGLVTKRKRAAGAWEKLKQRRDTAE 323
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14188.3248.1 vs. uniprot
Match: A0A7S3UXY6_HETAK (Hypothetical protein n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXY6_HETAK)

HSP 1 Score: 417 bits (1073), Expect = 6.150e-135
Identity = 187/256 (73.05%), Postives = 216/256 (84.38%), Query Frame = 3 
Query:  258 SGLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDSMDPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYVMVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKERRDNEEHSSGGASDKI 1025
            SG GITGGVHRLW+HRSY A++  R F ML NS+ANQGSIYHW+RDHRVHHK+SETDADPHNA RGFFFAHMGWL VKKHP+V+KAGR L ++DL+AD  VMFQ  +DPWF LFMCFV PA+V   GWGEDFW GF+VAGA+RY+ VLH TW VNSAAH++GDHPYD +SWP+ENPFVS+ A+GEGWHNWHHKYPFDY+ASEFGVS+QFNPTKM+ID  A  G+VT+RKRA GAW KLKE+RD EE      S K+
Sbjct:   63 SGFGITGGVHRLWSHRSYKANFIFRFFTMLANSIANQGSIYHWARDHRVHHKHSETDADPHNATRGFFFAHMGWLLVKKHPDVVKAGRELDFSDLDADWTVMFQKKLDPWFTLFMCFVFPALVGTYGWGEDFWTGFYVAGAVRYIYVLHVTWLVNSAAHLYGDHPYDPQSWPAENPFVSLGALGEGWHNWHHKYPFDYSASEFGVSSQFNPTKMIIDLAAACGMVTDRKRANGAWGKLKEKRDREEPELSKDSKKL 318
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14188.3248.1 vs. uniprot
Match: A0A4D9CQB7_9STRA (FA_desaturase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQB7_9STRA)

HSP 1 Score: 405 bits (1040), Expect = 9.920e-130
Identity = 178/254 (70.08%), Postives = 207/254 (81.50%), Query Frame = 3 
Query:  258 SGLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDSMDPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYVMVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKERRDNEEHSSGGASD 1019
            +GLGIT GVHRLWAHRSY A    R+ +ML NS+ANQGSIYHWSRDHRVHHKYSETDADPHNA RGFFFAHMGWL VKKHP+V++ G+ L ++DL ADP+V FQ   DPWFA FMCFV+PA+VA   WGE FW+ FWVAG LRY +VLHFTW VNSAAH++GDHPYD   WP+ENP VS+ AIGEGWHNWHH+YP+DYAASEFG+S QFNPTK  ID FA +G+V+NRKRA GAW+KL+E R  +E +     D
Sbjct:   62 TGLGITAGVHRLWAHRSYTATLPYRILLMLFNSIANQGSIYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQLDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVARYFWGEAFWNAFWVAGGLRYCLVLHFTWMVNSAAHLYGDHPYDPTIWPAENPLVSVVAIGEGWHNWHHRYPYDYAASEFGISRQFNPTKAFIDFFAAIGMVSNRKRATGAWAKLRESRAKDEANGKSIKD 315
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14188.3248.1 vs. uniprot
Match: A0A7S2UX82_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX82_9STRA)

HSP 1 Score: 400 bits (1028), Expect = 2.230e-128
Identity = 180/245 (73.47%), Postives = 206/245 (84.08%), Query Frame = 3 
Query:  258 SGLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDSMDPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYVMVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKERRDNE 992
            SG GITGGVHRLW+HRSY A    R  +ML NS+ANQGSIYHWSRDHRVHHK+SETDADPHNA RGFFFAHMGWL VKKHP+VIKAG+ L ++DL ADP+V+FQ   DPWFALFMCFVLP +V    WG++FW+G+WVAGALRYV VLH TW VNSAAH++GDHPYD KSWP+ENP VS  A+GEGWHNWHHKYPFDYAASE+G+  QFNPTK+LID  A +G V+ RKRA GAW KLK+RR +E
Sbjct:   62 SGFGITGGVHRLWSHRSYKARLPYRFVVMLANSIANQGSIYHWSRDHRVHHKHSETDADPHNATRGFFFAHMGWLLVKKHPDVIKAGKELDFSDLLADPVVVFQKRTDPWFALFMCFVLPGLVCTL-WGDNFWNGYWVAGALRYVYVLHCTWLVNSAAHLYGDHPYDPKSWPAENPMVSYAALGEGWHNWHHKYPFDYAASEYGLMAQFNPTKVLIDVCAMVGQVSQRKRATGAWEKLKDRRASE 305
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14188.3248.1 vs. uniprot
Match: A0A7S1ZS88_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S1ZS88_TRICV)

HSP 1 Score: 400 bits (1027), Expect = 6.510e-128
Identity = 176/245 (71.84%), Postives = 207/245 (84.49%), Query Frame = 3 
Query:  258 SGLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDSMDPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYVMVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKERRDNE 992
            SG GIT GVHRLW+HRSY+A    RVF+ML NS+ANQGSI+HW+RDHRVHHKYSETDADPHNA RGFFFAHMGWL+VKKHP+V+KAGR L + DL  DP+VMFQ  +DPWF L+M +V PA VA+  WGE+FW+GF+VAGALRY +VLHFTWFVNSAAH++GDHPYD  S+P+ENPFVS CAIGEGWHNWHHKYPFDYAASEFG+S+QFNP+K+ ID  A +GLV  RKR   AW+  K RR+ +
Sbjct:   64 SGFGITVGVHRLWSHRSYEAALPARVFLMLCNSIANQGSIFHWARDHRVHHKYSETDADPHNATRGFFFAHMGWLFVKKHPDVVKAGRELDFTDLSEDPVVMFQKKLDPWFTLYMSYVFPAQVASYFWGEEFWNGFFVAGALRYAVVLHFTWFVNSAAHLYGDHPYDVLSYPAENPFVSYCAIGEGWHNWHHKYPFDYAASEFGISSQFNPSKLFIDMMAAVGLVWGRKRGTAAWAMGKARRERD 308
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14188.3248.1 vs. uniprot
Match: F0YLN3_AURAN (FA_desaturase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLN3_AURAN)

HSP 1 Score: 397 bits (1021), Expect = 1.760e-127
Identity = 176/243 (72.43%), Postives = 204/243 (83.95%), Query Frame = 3 
Query:  258 SGLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDSMDPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYVMVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKERRD 986
            +GLGIT GVHRLW+HRSY+A   VR  +ML NS+ANQGSIYHW+RDHRVHHK+SETDADPHNA RGFFFAHMGWLYVKKHP+++  G+ L ++DL  D  VMFQ  +DPWF LFMCFV PA+VA  GWGE+FW+ FWVAGALRYV+VLH TW VNSAAH FGDHPYD + WP+ENPFVS+ +IGEGWHNWHHKYP+DYAASEFG+ +QFNPTK+ IDG A LGLV NRKRA  AW + K +RD
Sbjct:   37 TGLGITAGVHRLWSHRSYEAGKVVRCTLMLFNSIANQGSIYHWARDHRVHHKHSETDADPHNATRGFFFAHMGWLYVKKHPDIMVEGKKLDFSDLSRDGFVMFQKHLDPWFTLFMCFVFPALVAKFGWGENFWNAFWVAGALRYVVVLHCTWLVNSAAHFFGDHPYDDQ-WPAENPFVSLASIGEGWHNWHHKYPYDYAASEFGIGSQFNPTKLFIDGAAALGLVWNRKRATSAWERSKVKRD 278
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14188.3248.1 vs. uniprot
Match: A0A7S3PVL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVL4_9STRA)

HSP 1 Score: 398 bits (1022), Expect = 3.570e-127
Identity = 172/245 (70.20%), Postives = 209/245 (85.31%), Query Frame = 3 
Query:  258 SGLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDSMDPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYVMVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKERRDNE 992
            SG GIT GVHRLW+HRSY A + +R F+ML NS+ANQGSI+HW+RDHRVHHK+SETDADPHNA RGFFFAHMGWL+VKKHP +++AGR L ++DL  D +VMFQ  +DPWFAL+MCFVLPA +A++ WGEDFW+ F+VAGALRY++VLHFTW VNSAAH+FGDHPYD  S+PSENP VS C++GEGWHNWHHKYPFDYAASEFG+S+QFNP+K+ ID  +K G V +RKRA  AW+  + RRD +
Sbjct:   75 SGFGITVGVHRLWSHRSYSASFPLRAFLMLCNSIANQGSIFHWARDHRVHHKFSETDADPHNATRGFFFAHMGWLFVKKHPRIVEAGRDLDFSDLLEDSLVMFQKKLDPWFALYMCFVLPAQIASKFWGEDFWNAFFVAGALRYIVVLHFTWLVNSAAHLFGDHPYDVLSYPSENPLVSFCSVGEGWHNWHHKYPFDYAASEFGISSQFNPSKLFIDTMSKCGQVWDRKRATAAWAMGRARRDRD 319
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14188.3248.1 vs. uniprot
Match: A0A7S2YQ39_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YQ39_9STRA)

HSP 1 Score: 398 bits (1022), Expect = 1.010e-126
Identity = 175/245 (71.43%), Postives = 204/245 (83.27%), Query Frame = 3 
Query:  258 SGLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDSMDPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYVMVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKERRDNE 992
            SG GIT GVHRLW+HRSY+A + VR F+ML NS+ANQGSIYHW+RDHRVHHK+SETDADPHNA RGFFFAHMGWL+VKKHPEV+KAGR + ++DL  DP+V FQ   DPWFAL+MC+V+PA VA  GWGEDFW  F VAG LRY +VLHFTW VNSAAH++GDHPYD  S+PSENPFVS C++GEGWHNWHHKYPFDYAASEFG+S+QFNP+K+ ID  A +GLV  RKR   AW   + RRD +
Sbjct:   96 SGFGITVGVHRLWSHRSYEASFPVRFFLMLCNSIANQGSIYHWARDHRVHHKFSETDADPHNAMRGFFFAHMGWLFVKKHPEVVKAGREMDFSDLMDDPLVYFQKKCDPWFALYMCYVMPAQVAQYGWGEDFWTAFLVAGGLRYCVVLHFTWLVNSAAHLYGDHPYDVVSYPSENPFVSFCSVGEGWHNWHHKYPFDYAASEFGISSQFNPSKLFIDMLAAVGLVWGRKRGTSAWVMGRARRDRD 340
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14188.3248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQI0_9PHAE2.180e-18798.07FA_desaturase domain-containing protein n=2 Tax=Ec... [more]
A0A835YYM0_9STRA3.060e-14680.24Stearoyl-CoA desaturase n=1 Tax=Tribonema minus Ta... [more]
A0A835YKG8_9STRA1.740e-14278.86Stearoyl-CoA desaturase n=1 Tax=Tribonema minus Ta... [more]
A0A7S3UXY6_HETAK6.150e-13573.05Hypothetical protein n=6 Tax=Heterosigma akashiwo ... [more]
A0A4D9CQB7_9STRA9.920e-13070.08FA_desaturase domain-containing protein n=3 Tax=Mo... [more]
A0A7S2UX82_9STRA2.230e-12873.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1ZS88_TRICV6.510e-12871.84Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]
F0YLN3_AURAN1.760e-12772.43FA_desaturase domain-containing protein n=1 Tax=Au... [more]
A0A7S3PVL4_9STRA3.570e-12770.20Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S2YQ39_9STRA1.010e-12671.43Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14188contigEcto-sp13_S_contig14188:352..3929 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score498.0
Seed ortholog evalue2.3e-138
Seed eggNOG ortholog2880.D8LSZ1
Preferred nameSCD5
Model size2996
KEGG rclassRC00917
KEGG koko:K00507,ko:K06227,ko:K15331,ko:K20641
KEGG ReactionR02222
KEGG Pathwayko01040,ko01212,ko03320,ko04152,ko04212,ko04341,map01040,map01212,map03320,map04152,map04212,map04341
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0001101,GO:0001676,GO:0002376,GO:0003674,GO:0003824,GO:0004768,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005783,GO:0005789,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006637,GO:0006638,GO:0006639,GO:0006641,GO:0006723,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0007049,GO:0007154,GO:0007272,GO:0007275,GO:0007399,GO:0007584,GO:0007610,GO:0007617,GO:0007618,GO:0007619,GO:0008150,GO:0008152,GO:0008202,GO:0008361,GO:0008366,GO:0008610,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009605,GO:0009607,GO:0009617,GO:0009743,GO:0009744,GO:0009889,GO:0009893,GO:0009894,GO:0009987,GO:0009991,GO:0010033,GO:0010506,GO:0010817,GO:0010872,GO:0010873,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016053,GO:0016215,GO:0016491,GO:0016705,GO:0016717,GO:0018130,GO:0019098,GO:0019216,GO:0019218,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019748,GO:0019752,GO:0019953,GO:0022402,GO:0022414,GO:0030104,GO:0030154,GO:0030176,GO:0030258,GO:0031224,GO:0031227,GO:0031323,GO:0031325,GO:0031329,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032787,GO:0032896,GO:0033500,GO:0033559,GO:0033561,GO:0033865,GO:0033866,GO:0033875,GO:0033993,GO:0034030,GO:0034032,GO:0034033,GO:0034285,GO:0034433,GO:0034434,GO:0034435,GO:0034641,GO:0034654,GO:0035337,GO:0035383,GO:0035384,GO:0040008,GO:0040014,GO:0040018,GO:0042175,GO:0042221,GO:0042335,GO:0042445,GO:0042446,GO:0042552,GO:0042592,GO:0042593,GO:0042594,GO:0042742,GO:0042759,GO:0042810,GO:0042811,GO:0043167,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043588,GO:0043603,GO:0043604,GO:0043900,GO:0043901,GO:0043903,GO:0044126,GO:0044130,GO:0044144,GO:0044146,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0044703,GO:0045087,GO:0045444,GO:0045540,GO:0045570,GO:0045572,GO:0045793,GO:0045834,GO:0045926,GO:0045927,GO:0045940,GO:0046390,GO:0046394,GO:0046483,GO:0046486,GO:0046620,GO:0046622,GO:0046872,GO:0046890,GO:0046914,GO:0046949,GO:0048047,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048609,GO:0048638,GO:0048639,GO:0048731,GO:0048732,GO:0048733,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050810,GO:0050830,GO:0050872,GO:0050873,GO:0050878,GO:0050891,GO:0050896,GO:0051094,GO:0051186,GO:0051188,GO:0051239,GO:0051240,GO:0051301,GO:0051704,GO:0051707,GO:0051716,GO:0055086,GO:0055088,GO:0055090,GO:0055114,GO:0060179,GO:0061640,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070328,GO:0070542,GO:0070887,GO:0071496,GO:0071616,GO:0071704,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0080090,GO:0090066,GO:0090181,GO:0090407,GO:0097708,GO:0098542,GO:0098827,GO:0106118,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901576,GO:1901700,GO:1902930,GO:1903047,GO:1903699,GO:1903964,GO:1903966,GO:2000026
Exons2
EggNOG free text desc.oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
EggNOG OGsCOG1398@1,KOG1600@2759
EC1.14.19.1,2.1.1.35
Cds size699
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01004,ko03016,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462757.4833322-UTR-Ecto-sp13_S_contig14188:351..23101681462757.4833322-UTR-Ecto-sp13_S_contig14188:351..2310Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14188 352..2310 -
1681462757.5142624-UTR-Ecto-sp13_S_contig14188:3591..39291681462757.5142624-UTR-Ecto-sp13_S_contig14188:3591..3929Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14188 3592..3929 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462757.4958286-CDS-Ecto-sp13_S_contig14188:2310..25211681462757.4958286-CDS-Ecto-sp13_S_contig14188:2310..2521Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14188 2311..2521 -
1681462757.5060964-CDS-Ecto-sp13_S_contig14188:3103..35911681462757.5060964-CDS-Ecto-sp13_S_contig14188:3103..3591Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14188 3104..3591 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14188.3248.1prot_Ecto-sp13_S_contig14188.3248.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14188 2311..3591 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14188.3248.1

>prot_Ecto-sp13_S_contig14188.3248.1 ID=prot_Ecto-sp13_S_contig14188.3248.1|Name=mRNA_Ecto-sp13_S_contig14188.3248.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=233bp
MMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYV
KKHPEVIKAGRTLSYADLEADPIVMFQDSMDPWFALFMCFVLPAMVANRG
WGEDFWHGFWVAGALRYVMVLHFTWFVNSAAHMFGDHPYDHKSWPSENPF
VSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTN
RKRAVGAWSKLKERRDNEEHSSGGASDKIKST*
back to top

mRNA from alignment at Ecto-sp13_S_contig14188:352..3929-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14188.3248.1 ID=mRNA_Ecto-sp13_S_contig14188.3248.1|Name=mRNA_Ecto-sp13_S_contig14188.3248.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3578bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14188:352..3929- (Ectocarpus species13 EcNAP12_S_4_19m)
GATACCCTCAAGAACGTGGTAAACGGAGGATGTCCCGCACGGCAAAGGGG
TACTGAAAAATTGAACTGCGGAGGCTACGAAATTCAGGGCTAAAATTTAT
ACTAATTGACCCTTCGCTGAAGTGACCATCCTTACAGAGATGGATTTTCT
GGTGTTTTGTGGTAAAAACTAAAAGAAGCTACAATGCCTGGACACAAGCA
TCCTTCTGTTCCCCGTCTCATGTCTCCCCACCGGCCCTCCCCTCCCACGA
CGATCACAGCGGGCTCGGCATCACCGGCGGCGTCCATCGCCTGTGGGCGC
ACCGCTCCTACGACGCACACTGGTCGGTGCGTGTGTTCATGATGCTCATC
AACTCGATGGCCAACCAGGGCTCCATTTACCACTGGTCGCGTGACCACCG
CGTGCACCACAAGTACTCGGAGACGGACGCGGACCCGCACAACGCGAAGC
GTGGTTTCTTCTTCGCGCACATGGGCTGGCTGTACGTTAAGAAGCACCCG
GAGGTGATCAAGGCCGGGCGCACGCTCAGCTACGCGGACCTCGAGGCCGA
CCCCATCGTCATGTTCCAGGACAGCATGGACCCCTGGTTCGCCCTCTTCA
TGTGCTTCGTGCTGCCCGCCATGGTGGCCAACCGCGGGTGGGGCGAGGAC
TTCTGGCACGGGTTTTGGGTCGCGGGGGCGCTGCGGTACGTGATGGTGCT
CCACTTCACGTGGTTCGTGAACTCCGCCGCGCACATGTTCGGAGACCACC
CGTACGACCACAAGTCGTGGCCCTCGGAGAACCCGTTCGTGTCCATCTGC
GCCATCGGAGAGGGGTGGCACAACTGGTGAGCTTTTTTTTTCGATCCCGA
AAGAGTGCATTCAAGACCAAATAGCACGTACTTTTCTTTAGGGCAGTTGT
TGCAGCTTTCGTTGCACGAGAATGTAGTAGACGTGTTCTTGCCAGGAATT
TTGTGGAGTTTCGCTCTTGGACCGATGTAGCATTCCATGTTGAGTATCGC
TATTGTGCCGATGTAACATGCATATGCCGCCGTGTGTGTAGTTTCCTCTG
TCCGCCCTGCCGACTTGCTCGAGAACGGCGCTTTGTTCTTGGTGCTATTT
TCCGCGAGGAAAGATCCTGCATCCATTCTGTGCGCCCTCACGCAGGTGGT
GGTGCTTTGATGTCGCCATTTCACGTTGGCACACTCACGTACGTGGAACG
ACCGCGGGATGCGGAAACACCTCTCGATGCCACGCTCCGGCGTGTTTTGC
GGTAGTAACAACGATCCGAGACGACTCTGATTTGTCCGCGAAACGGAAGG
TGTGATGACACCGCGGCATACGGCAAACGTCCTGTTTTGCCTTTCCCTCA
ATGATTTCCAACCGTTCCCAATTTCACCGCCTTTTTTCTTTGTCCCTACG
ATGAACAGGCACCACAAGTACCCCTTCGACTACGCCGCGTCCGAGTTCGG
CGTGAGCACGCAGTTCAACCCCACGAAGATGCTCATCGACGGTTTCGCAA
AACTCGGGCTCGTGACCAACCGGAAGCGTGCCGTTGGAGCATGGTCCAAG
CTCAAGGAGCGTCGCGACAACGAGGAGCACAGCTCGGGGGGAGCCTCAGA
CAAGATCAAGTCGACATGAAAATAAATCCCACGTAGCGAGGGTGTGTTGG
GGGTGGGGTTCACTAGACTGAATCGGAAGATGACCACGGGGGGGTTGATC
TTACCGGCACACGAAGACAGACCCCATGAAAGGGTTCAGGGTGTGTCGTG
AGCACGACGGCTTTTGATGGGTCCGACGTTTTTTTTTGTGTTTGTTTGTG
TTTGATGTTGTCTCTTTTCGTTTCGTTTGTTTCTGGGAAAAGACTGGGAG
GCACTTTTTTTTACGGGAGGGATCCCTCATCATACGCGTGGTGGAAATCG
ACGTCACGAAAAGGAAAAAAGATTATGTGGCCGGGCTGGTGCCGACGTGG
ATGAATCGAAATGGCTTTAAAGGGAGGAGGGAGAAGTTGAGATACCGGCC
ATGGGCTGCCCCATCTCTTCCCTTTCTCGACTTCTTCAGCCACGCTTGAG
ATTGAGGTCCTCCAGACTGGGGTCTAGGGGTTGAGGAAGAAAACGAATAA
GATGGGTCTATTTTAATGCGAACGCGTGGATTTTATATCTCATCAGAAAC
CTTTGGGAGGGGGAGACGCGGGGGGGTGTCCTAGACTGCTGTTCGGTCGC
GCTCTTTGGGCCGTTCCTGGAGAGAAGAGTACTCTATTTGGGGGACGAAG
CAATGTGGTTGTTTTATGGTGGTCTTGACTTGCATGCGCTTAGTTTAAAT
GTATCATCGGGACCGGCAACTGACGGGGCCCCGCGAAGTTCGTTGAATTG
TTCTTTTTTAGGTTCTCGCTCAAGTTGGGCCTCGAAGCACACAAGCTCGC
AGCCGAAAACACGGACGTCAACAGCGCTTGCGGTATACTGTAGGTGGGAA
AATTGTCTGATCATCCTACCGAATACCCCAAAATAGTTTTTTGGTTTATG
TGTGAAATGTTTTGCAGAGGTACCAACGGTGCCGCCCTGCTCAATATCCT
AAGCTTTTTCGTGCCGCACGCACATAGCACACGACGTGACCTTTGCCAAG
TGGAACAAATGGCGCACGTGGGCGGTGCGACGGGGATATGTACTGCTTGA
CTACCATCTCGCCCCGCTCTCGGATGAGTTTTGTGTCTTGGGGTGCGTGT
GTTTTTGAAGGCACTCCCTTTGGTATTGTTACAACATGCAGCTACCTGTA
CGTACGTGAGGAAAGGCGTGGGCATTGGCTCTGGGCTTTGCATTGAGTTC
TCGATCGAATCGAAAATTCCTGGTCTCCTTTGTCAAGGGTATTTCGGGCT
GCTGAACTACTGAAATAGTTGGTTATCCTGGTGACTGCGGCTGTGTCACT
TCGCAGACAGTTGCTTCGCAAACAGCAGGTGGTATGGAAGGGCTGGGGGG
GGTCGAGAGCGGTCCGAACTGCTGCGACCCGTGGCTTCCATCCGGAGCGT
TGCCCCCGCATGATAACAACGAATTGCAGGGCCACTTTGAGTGTAGCGCG
GAAAGACTTGAAAGAGTGTAGACCTATAAACTTACTTTTTTGCCATCAGC
CTGGGCCATTCATCGAATTGAGCCCTTGGCCGGCCGCGTTGTGTTGGACG
TTGATGAAAAAAATTATGCTAGTTAGTTTGCTAGCTCCCGTCGTGCTGTG
TCGTGCCCTTGGTGACTGGTGTGTAGTATTGGAACATTTGACGTTGCGTG
AGTGGCGGCGAGGCTCGCCTGGAAACGAAAAGAAAAGAAAATTGAATATT
GAGTGATGAAGAAAAAGCTGTGAGACAGGTGTTTGTTTCCTTCACATGGA
TATCTCTGTTGGTGCTTTTCTGCACCGTGGGACGAAACGTCGAGACAGGC
CTCTCTTGCACCCTGGAAATACGTCAGCATGGAACTGCTGCATGGGGATC
ATGGTGGTTGTGGCCCACTATCCTTGTTATTCGATTGAAGAGTTGTCTGA
GAACGACGCTCCCCACCCCAGTTCGAACTTGCCGCCGTGCTGCCAACGCC
AGTCAGAGAAGATTTTTAATTGCTTCGT
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14188:352..3929-

>mRNA_Ecto-sp13_S_contig14188.3248.1 ID=mRNA_Ecto-sp13_S_contig14188.3248.1|Name=mRNA_Ecto-sp13_S_contig14188.3248.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=699bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14188:352..3929- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGCTCATCAACTCGATGGCCAACCAGGGCTCCATTTACCACTGGTC
GCGTGACCACCGCGTGCACCACAAGTACTCGGAGACGGACGCGGACCCGC
ACAACGCGAAGCGTGGTTTCTTCTTCGCGCACATGGGCTGGCTGTACGTT
AAGAAGCACCCGGAGGTGATCAAGGCCGGGCGCACGCTCAGCTACGCGGA
CCTCGAGGCCGACCCCATCGTCATGTTCCAGGACAGCATGGACCCCTGGT
TCGCCCTCTTCATGTGCTTCGTGCTGCCCGCCATGGTGGCCAACCGCGGG
TGGGGCGAGGACTTCTGGCACGGGTTTTGGGTCGCGGGGGCGCTGCGGTA
CGTGATGGTGCTCCACTTCACGTGGTTCGTGAACTCCGCCGCGCACATGT
TCGGAGACCACCCGTACGACCACAAGTCGTGGCCCTCGGAGAACCCGTTC
GTGTCCATCTGCGCCATCGGAGAGGGGTGGCACAACTGGCACCACAAGTA
CCCCTTCGACTACGCCGCGTCCGAGTTCGGCGTGAGCACGCAGTTCAACC
CCACGAAGATGCTCATCGACGGTTTCGCAAAACTCGGGCTCGTGACCAAC
CGGAAGCGTGCCGTTGGAGCATGGTCCAAGCTCAAGGAGCGTCGCGACAA
CGAGGAGCACAGCTCGGGGGGAGCCTCAGACAAGATCAAGTCGACATGA
back to top