mRNA_Ecto-sp13_S_contig14180.3246.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14180.3246.1 vs. uniprot
Match: D7FPS7_ECTSI (Phosphoserine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS7_ECTSI) HSP 1 Score: 123 bits (308), Expect = 2.140e-32 Identity = 63/87 (72.41%), Postives = 66/87 (75.86%), Query Frame = 1
Query: 7 GSPAPIGRLSKEFGYKCIVMVGDGATDMQASLPRYIVFDLNTPQAKPPAEAFIGYGGVTVRKSVRKGADWFVTDFGPLIEALRDSEN 267
G I LSKEFGYKC+VMVGDGATDMQA KPPA+AFIGYGGVTVRKSVRKGADWFVTDFGPLIEALRDSE+
Sbjct: 222 GKAKVIDLLSKEFGYKCVVMVGDGATDMQA---------------KPPADAFIGYGGVTVRKSVRKGADWFVTDFGPLIEALRDSES 293
BLAST of mRNA_Ecto-sp13_S_contig14180.3246.1 vs. uniprot
Match: A0A7S3Z9N4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z9N4_9EUKA) HSP 1 Score: 84.7 bits (208), Expect = 6.250e-19 Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 1 RAGSPAPIGRLSKEF-GYKCIVMVGDGATDMQASLPRYIVFDLNTPQAKPPAEAFIGYGGVTVRKSVRKGADWFVTDFGPLIEAL 252
RAG A L KE GY+ +VM+GDGATDM+A +PPA+AFIGYGGV R++V+KGADWFVTDF L++AL
Sbjct: 83 RAGGKAKAVALLKETKGYETVVMIGDGATDMEA---------------RPPADAFIGYGGVVEREAVKKGADWFVTDFKDLVDAL 152
BLAST of mRNA_Ecto-sp13_S_contig14180.3246.1 vs. uniprot
Match: A0A835ZG36_9STRA (Phosphoserine phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG36_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 3.140e-18 Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 1
Query: 7 GSPAPIGRLSKEFGYKCIVMVGDGATDMQASLPRYIVFDLNTPQAKPPAEAFIGYGGVTVRKSVRKGADWFVTDFGPLIEALR 255
G PA + L + GY +VMVGDG TDMQA +PPAEAFIGYGGV VR +VR+GADW+V DF +IE +R
Sbjct: 195 GKPAVVKALKAQHGYAPVVMVGDGVTDMQA---------------RPPAEAFIGYGGVAVRDAVRRGADWYVYDFQDMIEVVR 262
BLAST of mRNA_Ecto-sp13_S_contig14180.3246.1 vs. uniprot
Match: A0A7S0D1D2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D1D2_9EUKA) HSP 1 Score: 84.0 bits (206), Expect = 4.170e-18 Identity = 43/86 (50.00%), Postives = 55/86 (63.95%), Query Frame = 1
Query: 1 RAGSPAPI-GRLSKEFGYKCIVMVGDGATDMQASLPRYIVFDLNTPQAKPPAEAFIGYGGVTVRKSVRKGADWFVTDFGPLIEALR 255
RAG A + G L + YK IVM+GDGATDM+A +PPA+AFIGYGG+ VR +V++GADWFVTDF LI ++
Sbjct: 135 RAGGKARVVGMLKETMKYKSIVMIGDGATDMEA---------------RPPADAFIGYGGIAVRAAVKEGADWFVTDFNDLINVVK 205
BLAST of mRNA_Ecto-sp13_S_contig14180.3246.1 vs. uniprot
Match: A0A6G0XPX3_9STRA (Phosphoserine phosphatase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPX3_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 4.560e-18 Identity = 43/82 (52.44%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 7 GSPAPIGRLSKEFGYKCIVMVGDGATDMQASLPRYIVFDLNTPQAKPPAEAFIGYGGVTVRKSVRKGADWFVTDFGPLIEAL 252
G P + L KE GYK +VM+GDGATDMQA KPPA+ F+G+GGV R VR ADWFVTDF L+EAL
Sbjct: 178 GKPRVLELLKKEHGYKTMVMIGDGATDMQA---------------KPPADLFVGFGGVVARDIVRANADWFVTDFQELVEAL 244
BLAST of mRNA_Ecto-sp13_S_contig14180.3246.1 vs. uniprot
Match: UPI000B4596BF (phosphoserine phosphatase-like n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B4596BF) HSP 1 Score: 82.4 bits (202), Expect = 8.940e-18 Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 7 GSPAPIGRLSKEFGYKCIVMVGDGATDMQASLPRYIVFDLNTPQAKPPAEAFIGYGGVTVRKSVRKGADWFVTDFGPLIEALRDSEN 267
G + RL +FGYK +VM+GDGATDM+AS PPA+AFIGYGG VR+ V +GA WFV DF LI+ ++D+ +
Sbjct: 106 GKKVVVQRLKDKFGYKNLVMIGDGATDMEAS---------------PPADAFIGYGGNVVREKVAQGAHWFVKDFQELIQEIKDARS 177
BLAST of mRNA_Ecto-sp13_S_contig14180.3246.1 vs. uniprot
Match: A0A1V9ZE00_9STRA (Phosphoserine phosphatase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZE00_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.650e-17 Identity = 45/82 (54.88%), Postives = 48/82 (58.54%), Query Frame = 1
Query: 7 GSPAPIGRLSKEFGYKCIVMVGDGATDMQASLPRYIVFDLNTPQAKPPAEAFIGYGGVTVRKSVRKGADWFVTDFGPLIEAL 252
G P I L KE GYK +VMVGDGATDMQA KPPA+ FIG+GGV R V K ADWFV DF LIE L
Sbjct: 176 GKPRVIELLKKERGYKTVVMVGDGATDMQA---------------KPPADLFIGFGGVVARDVVEKHADWFVRDFNDLIEGL 242
BLAST of mRNA_Ecto-sp13_S_contig14180.3246.1 vs. uniprot
Match: UPI0014589F41 (phosphoserine phosphatase-like isoform X1 n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI0014589F41) HSP 1 Score: 84.7 bits (208), Expect = 1.810e-17 Identity = 44/87 (50.57%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 7 GSPAPIGRLSKEFGYKCIVMVGDGATDMQASLPRYIVFDLNTPQAKPPAEAFIGYGGVTVRKSVRKGADWFVTDFGPLIEALRDSEN 267
G + RL ++FGYK +VM+GDGATDM+A PPA+AFIGYGG VR+ V+KGA WFVTDF LI L +EN
Sbjct: 294 GKKVVVQRLKEKFGYKNLVMIGDGATDMEAC---------------PPADAFIGYGGNVVREKVQKGAVWFVTDFQELIWELNSTEN 365
BLAST of mRNA_Ecto-sp13_S_contig14180.3246.1 vs. uniprot
Match: A0A2A2KF96_9BILA (Phosphoserine phosphatase n=1 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2KF96_9BILA) HSP 1 Score: 83.2 bits (204), Expect = 1.820e-17 Identity = 42/82 (51.22%), Postives = 51/82 (62.20%), Query Frame = 1
Query: 7 GSPAPIGRLSKEFGYKCIVMVGDGATDMQASLPRYIVFDLNTPQAKPPAEAFIGYGGVTVRKSVRKGADWFVTDFGPLIEAL 252
G PA I L K FGYK IVM+GDGATD++A PPA+AFIG+GG +R+SV+ G+DWFVTDF L L
Sbjct: 184 GKPAVIAHLKKTFGYKNIVMIGDGATDLEAC---------------PPADAFIGFGGNQIRESVKNGSDWFVTDFNVLRREL 250
BLAST of mRNA_Ecto-sp13_S_contig14180.3246.1 vs. uniprot
Match: UPI001E277349 (phosphoserine phosphatase n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E277349) HSP 1 Score: 82.0 bits (201), Expect = 3.010e-17 Identity = 44/85 (51.76%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 1 RAGSPAPIGRLSKE-FGYKCIVMVGDGATDMQASLPRYIVFDLNTPQAKPPAEAFIGYGGVTVRKSVRKGADWFVTDFGPLIEAL 252
R+G A + R+ KE FGY+ +VMVGDGATD++AS PPA+AFIGYGG VR+SV+K A WFVTDF +I+ L
Sbjct: 151 RSGGKAEVVRILKEKFGYQNLVMVGDGATDLEAS---------------PPADAFIGYGGNVVRESVKKNARWFVTDFQEIIQVL 220 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14180.3246.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14180.3246.1 >prot_Ecto-sp13_S_contig14180.3246.1 ID=prot_Ecto-sp13_S_contig14180.3246.1|Name=mRNA_Ecto-sp13_S_contig14180.3246.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp RAGSPAPIGRLSKEFGYKCIVMVGDGATDMQASLPRYIVFDLNTPQAKPPback to top mRNA from alignment at Ecto-sp13_S_contig14180:2799..3279- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14180.3246.1 ID=mRNA_Ecto-sp13_S_contig14180.3246.1|Name=mRNA_Ecto-sp13_S_contig14180.3246.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=481bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14180:2799..3279- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14180:2799..3279- >mRNA_Ecto-sp13_S_contig14180.3246.1 ID=mRNA_Ecto-sp13_S_contig14180.3246.1|Name=mRNA_Ecto-sp13_S_contig14180.3246.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=267bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14180:2799..3279- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |