prot_Ecto-sp13_S_contig14175.3245.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14175.3245.1 vs. uniprot
Match: A0A6H5JNN2_9PHAE (DNA-directed RNA polymerase subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN2_9PHAE) HSP 1 Score: 219 bits (557), Expect = 5.340e-66 Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0
Query: 1 MENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAAMCRPLFVVENNRLRIRKKHINDLHGPNYGWTNLM 105
MENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAAMCRPLFVVENNRLRIRKKHINDLH PNYGWTNLM
Sbjct: 22 MENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAAMCRPLFVVENNRLRIRKKHINDLHDPNYGWTNLM 126
BLAST of mRNA_Ecto-sp13_S_contig14175.3245.1 vs. uniprot
Match: D7FHZ3_ECTSI (DNA-directed RNA polymerase subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ3_ECTSI) HSP 1 Score: 211 bits (537), Expect = 2.580e-61 Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0
Query: 1 MENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVENNRLRIRKKHINDLHGPNYGWTNLM 105
MENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDA +CRPLFVVENNRLRIRKKHINDLH PNYGWTNLM
Sbjct: 641 MENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHDPNYGWTNLM 746
BLAST of mRNA_Ecto-sp13_S_contig14175.3245.1 vs. uniprot
Match: A0A835YQ41_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ41_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.490e-40 Identity = 74/107 (69.16%), Postives = 89/107 (83.18%), Query Frame = 0
Query: 2 ENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVENNRLRIRKKHINDL--HGPNYGWTNLM 105
ENL+EI+P IA+ CTK+FVNGNW+G+HR+PN+LV+TLV QRR LDID EVSVVRDIK RELRLYTDA +CRPLFVV+NN+L IRK HI+DL + Y WT+LM
Sbjct: 553 ENLEEISPSTIAEKQCTKIFVNGNWIGIHREPNQLVRTLVIQRRCLDIDAEVSVVRDIKERELRLYTDAGRICRPLFVVQNNKLVIRKSHIHDLVSNPEEYNWTSLM 659
BLAST of mRNA_Ecto-sp13_S_contig14175.3245.1 vs. uniprot
Match: A0A2N9QM37_9AGAR (DNA-directed RNA polymerase (Fragment) n=9 Tax=Entolomataceae TaxID=71934 RepID=A0A2N9QM37_9AGAR) HSP 1 Score: 115 bits (288), Expect = 2.510e-30 Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = 0
Query: 1 MENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVENNRLRIRKKHIN------DLHGPNYGWTNLM 105
+E+L+E A +QT CTKVFVNG W+GVHRDP LV+T+ RR DI EVSVVRDI+ +ELRLYTDA +CRPLF+VEN +L ++KKH+ D G +Y W NL+
Sbjct: 30 LESLEENAH---SQTPCTKVFVNGVWMGVHRDPANLVKTIKKLRRKDDISPEVSVVRDIREKELRLYTDAGRVCRPLFIVENQQLALQKKHVRWLSEGRDDEGEDYKWDNLV 138
BLAST of mRNA_Ecto-sp13_S_contig14175.3245.1 vs. uniprot
Match: F0YIN3_AURAN (DNA-directed RNA polymerase subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIN3_AURAN) HSP 1 Score: 122 bits (306), Expect = 3.600e-30 Identity = 62/109 (56.88%), Postives = 75/109 (68.81%), Query Frame = 0
Query: 1 MENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVEN---NRLRIRKKHINDLHGPNYGWTNLM 105
MENL+EI+P IA TK+FVNG+WVGVHRDP+ L TL RR +DID EVSVVRDIK +ELR+YTDA +CRPL ++ LR+RK HI L GWT L+
Sbjct: 499 MENLEEISPQTIADPGTTKIFVNGSWVGVHRDPSTLESTLRSLRRQIDIDPEVSVVRDIKEKELRIYTDAGRVCRPLLIISKFSRQELRLRKSHIQKLVNGELGWTQLL 607
BLAST of mRNA_Ecto-sp13_S_contig14175.3245.1 vs. uniprot
Match: A0A6M8NXD4_9FUNG (DNA-directed RNA polymerase (Fragment) n=3 Tax=Pygmaeomyces TaxID=2824127 RepID=A0A6M8NXD4_9FUNG) HSP 1 Score: 115 bits (289), Expect = 4.570e-30 Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = 0
Query: 1 MENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAAMC-RPLFVVENNRLRIRKKHINDLHGP--NYGWTNLM 105
MENL+E++ + I + TK+FVNG WVG+HRDP L+ +L RR++DI EVS+VRDI+ +ELR+YTDA C RPLF+VEN +L++ K H+ L P NY W NL+
Sbjct: 52 MENLEELSANNIP--DATKIFVNGVWVGIHRDPGDLITSLKQMRRSVDISPEVSIVRDIREKELRMYTDAGRCCRPLFIVENQQLKLTKDHVAQLADPEANYRWQNLI 157
BLAST of mRNA_Ecto-sp13_S_contig14175.3245.1 vs. uniprot
Match: A0A0F6WBC6_9APHY (DNA-directed RNA polymerase (Fragment) n=1 Tax=Scopuloides sp. FP-102935-Sp TaxID=1648348 RepID=A0A0F6WBC6_9APHY) HSP 1 Score: 115 bits (287), Expect = 4.740e-30 Identity = 61/106 (57.55%), Postives = 76/106 (71.70%), Query Frame = 0
Query: 1 MENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVENNRLRIRKKHINDLHGPNYGWTNLM 105
+E+L+E A + T CTKVFVNG W+GVHRDP LV+T+ RR DI EVSVVRDI+ RELRLYTDA +CRPLF+VEN +L I KKHIN ++ + W L+
Sbjct: 18 LESLEENAH---SSTPCTKVFVNGVWMGVHRDPANLVKTIKKLRRKDDISPEVSVVRDIRERELRLYTDAGRVCRPLFIVENQQLVIAKKHINQINEKSLKWDELI 120
BLAST of mRNA_Ecto-sp13_S_contig14175.3245.1 vs. uniprot
Match: A0A3S8FSL3_9AGAR (DNA-directed RNA polymerase (Fragment) n=1 Tax=Inocephalus mucronatus TaxID=2487844 RepID=A0A3S8FSL3_9AGAR) HSP 1 Score: 114 bits (284), Expect = 5.260e-30 Identity = 63/112 (56.25%), Postives = 78/112 (69.64%), Query Frame = 0
Query: 1 MENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVENNRLRIRKKHINDL------HGPNYGWTNLM 105
+E+L+E A +QT CTKVFVNG W+GVHRDP LV+T+ RR DI EVSVVRDI+ +ELRLYTDA +CRPLF+VEN +L ++KKHI L G Y W NL+
Sbjct: 32 LESLEENAH---SQTPCTKVFVNGVWMGVHRDPANLVKTIKKLRRKDDISPEVSVVRDIREKELRLYTDAGRVCRPLFIVENQQLALQKKHIKWLSEGFNDEGEPYKWENLV 140
BLAST of mRNA_Ecto-sp13_S_contig14175.3245.1 vs. uniprot
Match: A0A288WHH6_9APHY (DNA-directed RNA polymerase (Fragment) n=5 Tax=Polyporaceae TaxID=5317 RepID=A0A288WHH6_9APHY) HSP 1 Score: 115 bits (288), Expect = 5.990e-30 Identity = 66/112 (58.93%), Postives = 79/112 (70.54%), Query Frame = 0
Query: 1 MENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVENNRLRIRKKHINDL----HGP--NYGWTNLM 105
+E+L+E A A T CTKVFVNG W+GVHRDP +LV TL RR DI+ EVSVVRDI+ RELRLYTDA +CRPLF+VEN +L I+KKHI L P NY W +L+
Sbjct: 31 LESLEENAH---ASTPCTKVFVNGVWMGVHRDPVKLVSTLRKLRRKDDINCEVSVVRDIRERELRLYTDAGRVCRPLFIVENQQLLIQKKHIESLVRSKDDPTINYNWDSLL 139
BLAST of mRNA_Ecto-sp13_S_contig14175.3245.1 vs. uniprot
Match: F0WJN8_9STRA (DNA-directed RNA polymerase subunit beta n=4 Tax=Oomycota TaxID=4762 RepID=F0WJN8_9STRA) HSP 1 Score: 121 bits (304), Expect = 6.720e-30 Identity = 61/108 (56.48%), Postives = 79/108 (73.15%), Query Frame = 0
Query: 2 ENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVENNRLRIRKKHINDLHG---PNYGWTNLM 105
ENL+EI P +I + TK+FVNGNWVGVHR+PN LV+TL RR +DID EVSV+RD+ RELR+YTDA +CRPLF+VE N+L ++K+ + L NY W NL+
Sbjct: 594 ENLEEIKPQIIPHS--TKIFVNGNWVGVHREPNELVRTLRSLRRCVDIDAEVSVIRDLMNRELRIYTDAGRVCRPLFIVEENQLLLQKEQVVKLQNHKITNYRWHNLL 699 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14175.3245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig14175.3245.1 ID=prot_Ecto-sp13_S_contig14175.3245.1|Name=mRNA_Ecto-sp13_S_contig14175.3245.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bpback to top |