prot_Ecto-sp13_S_contig1417.3243.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1417.3243.1
Unique Nameprot_Ecto-sp13_S_contig1417.3243.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length83
Homology
BLAST of mRNA_Ecto-sp13_S_contig1417.3243.1 vs. uniprot
Match: A0A6H5L1Z1_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1Z1_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 4.580e-49
Identity = 78/84 (92.86%), Postives = 81/84 (96.43%), Query Frame = 0
Query:    1 MCRNGCCTTCAVKVLEGK--VKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 82
            MCRNGCCTTCAVKVLEGK  VKQEGALGLLK+L+QEGYALTCCSYPKSDLVV+LQEEDDVYMKQFGNDFEGGGVEWGG FLDED
Sbjct:  152 MCRNGCCTTCAVKVLEGKARVKQEGALGLLKNLRQEGYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFEGGGVEWGGFFLDED 235          
BLAST of mRNA_Ecto-sp13_S_contig1417.3243.1 vs. uniprot
Match: A0A4D9CSH6_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH6_9STRA)

HSP 1 Score: 127 bits (320), Expect = 3.230e-35
Identity = 58/82 (70.73%), Postives = 70/82 (85.37%), Query Frame = 0
Query:    1 MCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 82
            MCRNGCCTTCAVK+ EGKVK E ALGLL+D+K +GYAL+CCS P+SD+V  LQ+ED+VY++Q+G  FE GGVEWGG FL ED
Sbjct:  136 MCRNGCCTTCAVKMKEGKVKMEAALGLLRDMKNKGYALSCCSLPRSDIVCELQDEDEVYVRQWGETFESGGVEWGG-FLPED 216          
BLAST of mRNA_Ecto-sp13_S_contig1417.3243.1 vs. uniprot
Match: A0A7S1ER34_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER34_9RHOD)

HSP 1 Score: 126 bits (316), Expect = 3.460e-35
Identity = 56/81 (69.14%), Postives = 68/81 (83.95%), Query Frame = 0
Query:    2 CRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 82
            CR+GCCTTCAV++ +G V QE ALGL+K L+++GYAL C SYP+SDLV  LQ+ D+VY+KQFGN FE GG EWGGVFLDED
Sbjct:   89 CRHGCCTTCAVRIEQGSVDQEEALGLMKALREQGYALLCVSYPESDLVATLQDADEVYVKQFGNSFESGGKEWGGVFLDED 169          
BLAST of mRNA_Ecto-sp13_S_contig1417.3243.1 vs. uniprot
Match: A0A7S3YL42_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YL42_HETAK)

HSP 1 Score: 126 bits (316), Expect = 1.400e-34
Identity = 56/82 (68.29%), Postives = 70/82 (85.37%), Query Frame = 0
Query:    1 MCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 82
            MCRNGCCTTCAVKV+EGKVKQ+  +GL+K+L++EGYAL CC+YP+SDLV+ +  ED+ Y+KQ+G  FE GGVEWGG FL ED
Sbjct:  139 MCRNGCCTTCAVKVVEGKVKQDAQIGLMKELRKEGYALMCCAYPRSDLVLEVTAEDECYIKQWGESFESGGVEWGG-FLPED 219          
BLAST of mRNA_Ecto-sp13_S_contig1417.3243.1 vs. uniprot
Match: A0A835Z8Q8_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q8_9STRA)

HSP 1 Score: 125 bits (313), Expect = 3.490e-34
Identity = 54/82 (65.85%), Postives = 68/82 (82.93%), Query Frame = 0
Query:    1 MCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 82
            MCRNGCCTTCA+ V EGKVK EG LGLLKDL+++G+ LTCCSY  +D+ ++LQ+ED+VY+KQ+G  FE GGVEWGG   +ED
Sbjct:  134 MCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED 215          
BLAST of mRNA_Ecto-sp13_S_contig1417.3243.1 vs. uniprot
Match: A0A5J4YT31_PORPP (Ferredoxin-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT31_PORPP)

HSP 1 Score: 124 bits (310), Expect = 6.290e-34
Identity = 54/81 (66.67%), Postives = 68/81 (83.95%), Query Frame = 0
Query:    2 CRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 82
            CR+GCCTTCAV++  G V+Q+ ALGLL++++ +GYAL C SYPKSD+V  LQ+ED+VY+KQFG  FE GG EWGGVFLDED
Sbjct:  118 CRHGCCTTCAVRIESGAVQQDQALGLLREMRDQGYALLCVSYPKSDIVATLQDEDEVYIKQFGGTFEQGGKEWGGVFLDED 198          
BLAST of mRNA_Ecto-sp13_S_contig1417.3243.1 vs. uniprot
Match: A0A7S2V5A4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A4_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.900e-33
Identity = 56/81 (69.14%), Postives = 68/81 (83.95%), Query Frame = 0
Query:    2 CRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 82
            CRNGCCTTCAVK  EGK+K +  LGLLK++K++GY L CCSYP+SDLVV +Q+ED+VY KQ+G+ FE GGVEWGG FL ED
Sbjct:  176 CRNGCCTTCAVKTKEGKMKMDPQLGLLKEMKKQGYGLLCCSYPRSDLVVEVQKEDEVYRKQWGDTFESGGVEWGG-FLPED 255          
BLAST of mRNA_Ecto-sp13_S_contig1417.3243.1 vs. uniprot
Match: A0A482T133_9ARCH (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T133_9ARCH)

HSP 1 Score: 118 bits (295), Expect = 1.260e-31
Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 0
Query:    1 MCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 82
            MCR GCCT C VKV EGKVK +  LGLLK+ + +GYAL+CC+YPKSD+V  LQ+ED++Y+KQ+   FEGGGV WGGV  + D
Sbjct:  120 MCRQGCCTICTVKVSEGKVKMDAPLGLLKEFRNDGYALSCCAYPKSDVVCELQDEDEMYIKQWAEGFEGGGVIWGGVLPEHD 201          
BLAST of mRNA_Ecto-sp13_S_contig1417.3243.1 vs. uniprot
Match: R7QMK8_CHOCR (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMK8_CHOCR)

HSP 1 Score: 115 bits (287), Expect = 5.570e-30
Identity = 51/81 (62.96%), Postives = 64/81 (79.01%), Query Frame = 0
Query:    2 CRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 82
            C NGCCTTCAVK+  G+V Q  ALGLLK+++ + YAL C SYPKSD+   LQ+ED+VY+KQFG+ FE GGVEWGGV  ++D
Sbjct:  162 CLNGCCTTCAVKITSGEVDQSEALGLLKEMRDQDYALLCVSYPKSDIECVLQDEDEVYVKQFGSSFESGGVEWGGVVPEDD 242          
BLAST of mRNA_Ecto-sp13_S_contig1417.3243.1 vs. uniprot
Match: A0A2V3IXT2_9FLOR (Ferredoxin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXT2_9FLOR)

HSP 1 Score: 112 bits (281), Expect = 8.670e-30
Identity = 51/81 (62.96%), Postives = 65/81 (80.25%), Query Frame = 0
Query:    2 CRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 82
            CRNGCCTTCAVK+  G+V+QE ALGLLKD++ +GYAL C SY +SD+   LQ +D+VY+KQFG+ FE GGVEWGG   ++D
Sbjct:   97 CRNGCCTTCAVKMSTGEVQQEEALGLLKDMRAKGYALLCVSYARSDIDCVLQGKDEVYVKQFGSSFESGGVEWGGFVPEDD 177          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1417.3243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1Z1_9PHAE4.580e-4992.862Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A4D9CSH6_9STRA3.230e-3570.732Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S1ER34_9RHOD3.460e-3569.14Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S3YL42_HETAK1.400e-3468.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835Z8Q8_9STRA3.490e-3465.85Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A5J4YT31_PORPP6.290e-3466.67Ferredoxin-1 n=1 Tax=Porphyridium purpureum TaxID=... [more]
A0A7S2V5A4_9STRA3.900e-3369.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A482T133_9ARCH1.260e-3162.202Fe-2S iron-sulfur cluster binding domain-containi... [more]
R7QMK8_CHOCR5.570e-3062.962Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A2V3IXT2_9FLOR8.670e-3062.96Ferredoxin-2 n=1 Tax=Gracilariopsis chorda TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 1..68
e-value: 6.0E-18
score: 66.4
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 2..45
e-value: 6.1E-8
score: 32.5
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 1..56
score: 9.066
NoneNo IPR availablePANTHERPTHR43112FAMILY NOT NAMEDcoord: 2..72
NoneNo IPR availablePANTHERPTHR43112:SF10FERREDOXIN C 2, CHLOROPLASTICcoord: 2..72
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 2..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1417contigEcto-sp13_S_contig1417:13578..14767 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1417.3243.1mRNA_Ecto-sp13_S_contig1417.3243.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1417 12780..14890 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1417.3243.1 ID=prot_Ecto-sp13_S_contig1417.3243.1|Name=mRNA_Ecto-sp13_S_contig1417.3243.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=83bp
MCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVV
RLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012675Beta-grasp_dom_sf
IPR0010412Fe-2S_ferredoxin-type
IPR0360102Fe-2S_ferredoxin-like_sf