mRNA_Ecto-sp13_S_contig1417.3242.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1417.3242.1 vs. uniprot
Match: A0A6H5KD56_9PHAE (SufE domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD56_9PHAE) HSP 1 Score: 518 bits (1335), Expect = 4.430e-177 Identity = 292/319 (91.54%), Postives = 301/319 (94.36%), Query Frame = 1
Query: 1 MVARAAILSVALTTSMCSVGEAFVTPNVAVVPGGAFSSHRAAQAXXXXXXXXXXXXXXRSGRD-ATLMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGLAGLL-AMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRAAVEQAAPAAEAAAPEEAEQSGTMASRIAEKLQKLEPLKLVIEDESGGEESKFMINIVSKSFEGLTLLKRHRSVYGLMAEEMKIVHAVTLDTKTPEQAGM 951
MVARAAILSVAL+TS+CSVGE+FVTPNVAVVPGGAFSSHRAAQA XXXXXXRSGRD A LMSTSTDLK+LGLTPELERLTKVFRSCPTDKMRQMQLLHL QMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKG A LL AMGLSGNSPEAIQTVKPEFIQVAGLQASL AGRNNGFINMLRTMKGKALALGGESAIRAA+EQAAPAAE AAPEEAE+SGTMASR+ EKLQKLEPLKLVIEDESGGEESKFMI IVSKSFEGLTLLKRHRSVYGLMA+EMKIVHAVTLDTKTPE+AGM
Sbjct: 1 MVARAAILSVALSTSVCSVGESFVTPNVAVVPGGAFSSHRAAQAARSRRPAAXXXXXXRSGRDDAPLMSTSTDLKQLGLTPELERLTKVFRSCPTDKMRQMQLLHLTQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGSARLLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLAAGRNNGFINMLRTMKGKALALGGESAIRAAMEQAAPAAETAAPEEAEESGTMASRVTEKLQKLEPLKLVIEDESGGEESKFMIKIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEAGM 319
BLAST of mRNA_Ecto-sp13_S_contig1417.3242.1 vs. uniprot
Match: A0A836CLM4_9STRA (Cysteine desulfuration protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLM4_9STRA) HSP 1 Score: 221 bits (564), Expect = 1.810e-62 Identity = 135/260 (51.92%), Postives = 167/260 (64.23%), Query Frame = 1
Query: 196 LMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKAL-ALGGESAIRAAVEQAAPAAEAAAPEEAEQSGT-------MASRIAEKLQKLEPLKLVIEDESGGEESKFMINIVSKSFEGLTLLKRHRSVYGLMAEEMKIVHAVTLDTKTPEQAGM 951
LMST+ ++ELGLT ELERL K FRS P DKMR QLL +A G ++ +T +NKV GCLSTV+V A++K G +Y+ DSDA +TKGL +L GLSGN+ IQ+VKPEFIQVAGLQ SLT GRNNGFINML TMK KAL A A E + G M + I KLQ L P++L +EDES +E KF I +VS +FEGL L+KRH+ V+ +A+EMK VHAV L TKTP + G+
Sbjct: 60 LMSTAPSIQELGLTRELERLVKAFRSMPDDKMRYKQLLFMAAQGAELPSEFKTTDNKVQGCLSTVHVVAKMKQGKVYFEGDSDAQLTKGLLSILIRGLSGNAAADIQSVKPEFIQVAGLQTSLTPGRNNGFINMLSTMKRKALQAEXXXXXXXXXXXXXXXXXXXXADSEGDDMGVAEVPGKPMTTAIMRKLQALRPVRLQVEDESE-DEQKFYIAVVSSAFEGLPLVKRHQLVHLTIADEMKQVHAVQLSTKTPAEMGL 318
BLAST of mRNA_Ecto-sp13_S_contig1417.3242.1 vs. uniprot
Match: M2XAG5_GALSU (Cysteine desulfuration protein SufE (Plastid) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XAG5_GALSU) HSP 1 Score: 182 bits (462), Expect = 6.290e-48 Identity = 114/260 (43.85%), Postives = 155/260 (59.62%), Query Frame = 1
Query: 214 DLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALA----LGGESAIRAAVEQAAPAAEAAAPEEAEQSGTMASRIAEKLQKLEPLKLVIEDES------------GGEESKFMINIVSKSFEGLTLLKRHRSVYGLMAEEMKI-VHAVTLDTKTPEQ 942
D K+LGLTPEL RL K F + P K+R QLL+LAQ + + +T ENKV GCLSTV+V + + I++ DSDA +TKGL LL GL+G + E I+ + PEF+ VAGL SLT GRNNGF+NML+TMK KA L G S P +A+ SG + S I EKLQKL+P +L + D+S E+ F + +VS +F GL+L+KRH+ VY L+ +E+K +HA+ + KTP +
Sbjct: 64 DEKKLGLTPELARLVKSFAAAPDPKLRVQQLLYLAQTLEPLPFQYKTNENKVPGCLSTVHVVGDCDNEKIFFKGDSDAQLTKGLLALLIKGLNGCTVEEIERISPEFVTVAGLSVSLTPGRNNGFLNMLQTMKNKAKEAASKLNGVSREGRNYSDRVPKTQASPSTAETASGPIYSAIVEKLQKLKPSRLEVHDDSFQHAGHVGAKGLRSSETHFSVYVVSDAFVGLSLVKRHQLVYTLLGQELKEGLHALRIQAKTPSE 323
BLAST of mRNA_Ecto-sp13_S_contig1417.3242.1 vs. uniprot
Match: A0A7S1T9Y1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T9Y1_9RHOD) HSP 1 Score: 181 bits (458), Expect = 1.000e-47 Identity = 120/254 (47.24%), Postives = 152/254 (59.84%), Query Frame = 1
Query: 214 DLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYV-AAEVKDGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRAAVEQAAPAAEAAAPEEAEQSGTMASRIAEKLQKLEPLKLVIEDES-----------GGEESKFMINIVSKSFEGLTLLKRHRSVYGLMAEEMKI-VHAVTLDTKTP 936
+L LGLTPELERLT+ F P KMR QLL +AQ MD +L T ENKV GCLSTVYV A+ DG ++ DSDA +TKGL LL GL G + E I+ V PEFIQ +GL SLT GRNNGF+NML +K KA A +S + P E P +A G + RIA+KL L+P +LVI D+S E+ F I I S +FE LT ++RHR +Y L+A+E+ VHA+ +D +TP
Sbjct: 46 ELDALGLTPELERLTRQFSMVPDPKMRYQQLLFMAQELPSMDTSLMTSENKVPGCLSTVYVHASRNGDGTVHLVGDSDAQLTKGLIALLIQGLDGKTVEEIERVSPEFIQASGLAVSLTPGRNNGFLNMLAKIKAKARACI-DSPVEVLSATPDPVVERNIPPDA---GPIYRRIAQKLSVLKPTELVISDKSKQHSGHPGNLQAKTETHFSIRIRSTAFEPLTPVQRHRVIYTLLAQELNDGVHALQIDAQTP 295
BLAST of mRNA_Ecto-sp13_S_contig1417.3242.1 vs. uniprot
Match: A0A8J5XHT0_DIALT (SufE domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XHT0_DIALT) HSP 1 Score: 171 bits (432), Expect = 3.670e-44 Identity = 118/261 (45.21%), Postives = 153/261 (58.62%), Query Frame = 1
Query: 196 LMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEV-KDGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRAAVEQAAPAAEAAAPEEAEQSGTMASRIAEK-LQKLEPLKLVIEDESG------------GEESKFMINIVSKSFEGLTLLKRHRSVYGLMAEEMK-IVHAVTLDTKT 933
LMS S LGLTPELE++ +VF+ P K+R QLL LAQ MD L+ ENKV GCLSTV+V A G I+Y+ DSDAM+TKGL LL GLSG++ + I V P+FIQ AG+ ASLT GRNNG +NML MK KA AL G A+ + A P+A AP +A I K L KL+P + + D S E+ F + +VS F GL+L++RH+ +Y L+AEEM VHA+ + +T
Sbjct: 35 LMSAS-----LGLTPELEQVVEVFKMVPDQKLRYQQLLFLAQKAKPMDAVLKVPENKVPGCLSTVFVHATADSSGNIFYTGDSDAMLTKGLVVLLTDGLSGHTADEILAVDPKFIQEAGIAASLTPGRNNGLLNMLALMKQKAKALAGV-AVPSGPSAANPSASPPAPVVEGGGAPVADSIIGKVLAKLKPTTVRLRDNSAQHAGHAGREGLAASETHFALEVVSDVFSGLSLVQRHQLIYALLAEEMAGSVHALQITART 289
BLAST of mRNA_Ecto-sp13_S_contig1417.3242.1 vs. uniprot
Match: A0A7S3Q629_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q629_9STRA) HSP 1 Score: 170 bits (431), Expect = 9.830e-44 Identity = 107/267 (40.07%), Postives = 156/267 (58.43%), Query Frame = 1
Query: 199 MSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDG-----LIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRAAVEQAAPAAEAAAPEEAEQSGT-MASRIAEKLQKLEPLKLVIEDESGGE-------------ESKFMINIVSKSFEGLTLLKRHRSVYGLMAEEMKIVHAVTLDTKTPEQ 942
M+ +++++ LGLTPELE++TK F S P +K+R QLL++A +DP L ENKV GCLSTVYV +D ++ + DSD +TKGL LL G+SG + E IQ V PEFI A + SLT GRNNGF+NML MK KA + A + E+A E E +G M + + E L KL+P+ L + D+S ES F++N+V++ F+G+ L+KRH+ +Y ++ E M +HA++++ K P Q
Sbjct: 50 MADTSEIEALGLTPELEKMTKAFGSIPDEKLRYKQLLYMANQLKPLDPKLMVSENKVPGCLSTVYVDCTARDNEEGETVLDFVGDSDGQLTKGLVALLVRGMSGCTAEQIQKVDPEFINAAKITQSLTPGRNNGFLNMLAVMKAKATSYS-VGADNSGGEEADADTEGVISSFDEIAGKPMYNDMMESLLKLKPVTLELIDDSASHAGHAGSKGWEESGESHFVLNMVAEVFDGMPLVKRHQLIYLVLGETMDKIHALSINAKAPSQ 315
BLAST of mRNA_Ecto-sp13_S_contig1417.3242.1 vs. uniprot
Match: A0A4D9DCV6_9STRA (SufE domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCV6_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.500e-43 Identity = 116/271 (42.80%), Postives = 160/271 (59.04%), Query Frame = 1
Query: 181 GRDATLMSTSTDLKE--LGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALG--GESAIRAAVEQAAPAAEAAAPEEAEQSGTMASRIAEKLQKLEPLKLVIEDESG-----------GEESKFMINIVSKSFEGLTLLKRHRSVYGLMAEEMKIVHAVTLDTKTPEQAG 948
G T +STD+ E LGLTP L +++ F+ ++ R LL LA M + ENKV GCLSTVYV A ++DG +Y+ DSDA +TKGL LL G+SG S E IQ VKPEFI+ AG+ ASLT GRNNGF+NML +K KA+ GE A Q PA E +E +S + + + L+P +L ++D+S G ES F + IV+ FEGL+L++RH+ VY ++A EM+ +HA+++D KTP +AG
Sbjct: 49 GAKTTTYMSSTDIDESSLGLTPRLFEVSRAFQLMD-ERTRVQNLLALASSMKPMKDFRKLPENKVPGCLSTVYVHAFMQDGKVYFEGDSDAQLTKGLVALLIEGMSGCSAEEIQAVKPEFIKYAGIAASLTPGRNNGFLNMLAMLKRKAVEAESKGEGA-----GQEEPAVEF---QEDIARPVYSSCMKKLINFLKPKRLEMQDDSAQHAGHAGAKGLGGESHFSLRIVADCFEGLSLVQRHKLVYTVLAAEMQQIHALSIDAKTPAEAG 310
BLAST of mRNA_Ecto-sp13_S_contig1417.3242.1 vs. uniprot
Match: A0A1Z5K9T0_FISSO (SufE domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9T0_FISSO) HSP 1 Score: 164 bits (415), Expect = 4.340e-42 Identity = 113/266 (42.48%), Postives = 146/266 (54.89%), Query Frame = 1
Query: 190 ATLMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYV---AAEVKDGLIY--YSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRAAVEQAAPAAEAAAPEEAEQSGTMASRIAEKLQKLEPLKLVIED----------ESGGEESKFMINIVSKSFEGLTLLKRHRSVYGLMAEEMKIVHAVTLDTKTPEQ 942
+T T TD + LTPEL ++ F S DK+R QLL++A +DP+ ENKV GCLSTVYV A + DG+I + DSD ++TKGL LL GLSGN+ E IQ V P FIQ G+ ASLT GRNNGF+NML MK KA L E A A P M I + LQ L+P+ L +ED S E+ F + IV+ +FEGL L+KRH+ VY L+ + M +HA+ + KTPE+
Sbjct: 11 STQEDTHTD-NPMRLTPELLKIANAFESIGDDKLRYKQLLYMATQLSPIDPSQAIPENKVPGCLSTVYVDGTAVDKGDGVIRIEFVGDSDGLLTKGLVALLVRGLSGNTAEDIQNVDPGFIQKTGIAASLTPGRNNGFLNMLNVMKIKAKQLEANYQATGPSESATTTAGDEKP--------MYQAIVQGLQALKPVSLKLEDVSYQHAGHREASKDGETHFNLEIVASAFEGLNLVKRHKLVYMLLGDVMPRIHALQISAKTPEE 267
BLAST of mRNA_Ecto-sp13_S_contig1417.3242.1 vs. uniprot
Match: A0A7S2ZLB0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLB0_9RHOD) HSP 1 Score: 160 bits (405), Expect = 1.770e-40 Identity = 108/269 (40.15%), Postives = 152/269 (56.51%), Query Frame = 1
Query: 184 RDATLMSTS-TDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGL--IYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESA---IRAAVEQAAPAAEAAAPEEAEQSGTMASRIAEKLQKLEPLKLVIEDES--------GGEESKFMINIVSKSFEGLTLLKRHRSVYGLMAEEMKI----VHAVTLDTKTP 936
R T+M+ + ++ L LTP LE++ + P K+R QLLH A M+P L+TE NKV GCLSTV+V AE+ +Y+ DSDA +TKGL +L GLSG++ I+ V P+FI+ +GL SLT GRNNGFINML+ MK KA L E+A R+ + A E P A+ I L +L P++L +ED S G+E+ I +VS++FE + L+ RH+ +Y L+ M VHA+ +DTK P
Sbjct: 25 RLGTIMTAADVEMSSLNLTPALEKMVSSLKMFPDSKVRYQQLLHYASTLGPMEPELKTEMNKVPGCLSTVFVHAEMNPDTRKVYFKGDSDAQLTKGLVSMLVNGLSGSTALQIEKVNPDFIKASGLTVSLTPGRNNGFINMLKLMKRKAAVLDEEAAGLGPRSTGQTDEDAVEFEVP-----GKPRATAIGRALMQLNPIELEVEDFSESHKGHAHAGDETHIRIKVVSEAFEDMPLVLRHKVIYTLLDSFMDKGSGGVHALQMDTKAP 288
BLAST of mRNA_Ecto-sp13_S_contig1417.3242.1 vs. uniprot
Match: A0A7S4I3L9_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I3L9_9STRA) HSP 1 Score: 161 bits (407), Expect = 4.260e-40 Identity = 114/278 (41.01%), Postives = 158/278 (56.83%), Query Frame = 1
Query: 190 ATLMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVK------DGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRA-----AVEQAAPAAEAAAP---EEAEQSGTMASRIAEKLQKLEPLKLVIEDES----------GGEES---KFMINIVSKSFEGLTLLKRHRSVYGLMAEEMKIVHAVTLDTKTPEQ 942
AT +T+ D LGLTPEL R+T F S P +KMR QLL +A + P ENKV GCLSTVYV A ++ + ++ + +SD ++TKGL LL GLSG + E +Q V PEFI A + SLT GRNNGF+NML MK KA +GG A A +VE+ E AA EE E + +A+ L+P + + D S G EES F INIV+++F+GL+L+KRH+ VY L+ + M+ +HA+ + +TP++
Sbjct: 72 ATDEATTAD--PLGLTPELRRMTDAFASIPDEKMRYKQLLFMANQLPAISPDAMVPENKVPGCLSTVYVDAVMERDEERGEDVVKFLGESDGLLTKGLVALLVRGLSGCTAEEVQRVNPEFIHEAKISQSLTPGRNNGFLNMLAVMKKKAAEIGGPEAAAAGDDAGSVEEGED--EVAATLTFEEVEGKPMYNAMMAKLTTMLKPTSIELVDNSDQHAGHAGSKGWEESGESHFSINIVAEAFDGLSLVKRHQLVYMLLGDIMQKIHALQIVARTPDE 345 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1417.3242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1417.3242.1 >prot_Ecto-sp13_S_contig1417.3242.1 ID=prot_Ecto-sp13_S_contig1417.3242.1|Name=mRNA_Ecto-sp13_S_contig1417.3242.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=318bp MVARAAILSVALTTSMCSVGEAFVTPNVAVVPGGAFSSHRAAQAARPKRPback to top mRNA from alignment at Ecto-sp13_S_contig1417:5957..11963- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1417.3242.1 ID=mRNA_Ecto-sp13_S_contig1417.3242.1|Name=mRNA_Ecto-sp13_S_contig1417.3242.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6007bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1417:5957..11963- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1417:5957..11963- >mRNA_Ecto-sp13_S_contig1417.3242.1 ID=mRNA_Ecto-sp13_S_contig1417.3242.1|Name=mRNA_Ecto-sp13_S_contig1417.3242.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=954bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1417:5957..11963- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |