prot_Ecto-sp13_S_contig10326.324.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10326.324.1
Unique Nameprot_Ecto-sp13_S_contig10326.324.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length318
Homology
BLAST of mRNA_Ecto-sp13_S_contig10326.324.1 vs. uniprot
Match: A0A6H5KLM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLM5_9PHAE)

HSP 1 Score: 438 bits (1127), Expect = 2.970e-149
Identity = 219/266 (82.33%), Postives = 232/266 (87.22%), Query Frame = 0
Query:   53 SGFQEEEVSSGMRDGAGHNVHHRMVQGEGALSDADRARFGNMPPEKATAVRGAYPSPNPAGAA-MARTRRSNKGTMGVLYWQLSDTWQGPSWSTIEYDGAWKVSHHMVRRAFSIVSIAGTVVKRPRTAETSTDSVEDDVEASLFECHMTSDLEEQVSGSYTVSVYLWDDNCDPVASWGGTVGPMSPGSTTKVFQATIDELSRVAGADRMIVHMVFAETVEAGISNDAAPMAVERVESVYYLSSANAAESVTVDDLPETGLSWEVLP 317
            SGF EE+ SSGM  GA HNVHHRMVQGEGALSDADRARFG+MPP+ ATAVR  YPSPNPA    +ARTR S +GTMGVLYWQLSDTWQGPSWSTIE+DGAWKVSHHMVRRAFSIVSI GTVVKRPRTAE S D V DDVE S FECH+TSDL+  +SGSYTVS YLWDDNCDPVASWGGTVGPMSPGSTT VFQAT +EL R AG DRMIVHMVF ETVEAG SNDA PMAV+R+ESVYYL SANA ESVTVDDLPETGLSWE+LP
Sbjct:  108 SGFLEEDASSGMLGGAEHNVHHRMVQGEGALSDADRARFGDMPPDTATAVRATYPSPNPAAXXXVARTRSSTRGTMGVLYWQLSDTWQGPSWSTIEHDGAWKVSHHMVRRAFSIVSIGGTVVKRPRTAEESGDGVGDDVEVSWFECHVTSDLQRGISGSYTVSAYLWDDNCDPVASWGGTVGPMSPGSTTIVFQATTEELRRAAGTDRMIVHMVFEETVEAGASNDAPPMAVQRLESVYYLPSANAVESVTVDDLPETGLSWELLP 373          
BLAST of mRNA_Ecto-sp13_S_contig10326.324.1 vs. uniprot
Match: D7FZJ5_ECTSI (Similar to Mannosidase, beta A, lysosomal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ5_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 3.530e-102
Identity = 154/185 (83.24%), Postives = 165/185 (89.19%), Query Frame = 0
Query:   76 MVQGEGALSDADRARFGNMPPEKATAVRGAYPSPNPAGAA-MARTRRSNKGTMGVLYWQLSDTWQGPSWSTIEYDGAWKVSHHMVRRAFSIVSIAGTVVKRPRTAETSTDSVEDDVEASLFECHMTSDLEEQVSGSYTVSVYLWDDNCDPVASWGGTVGPMSPGSTTKVFQATIDELSRVAGADR 259
            +V+ EGALSDADRARFG+MPP+ AT VRGAYPSPNPA AA +ARTR S +GTMGVLYWQLSDTWQGPSWSTIEYDGAWKVSH+MVRRAFSIVSIAGTVVKRPR AE S D V DDVEAS FEC++TSDLE  V+GSYTVSVYLWDD+CDPVASW GTVGPMSPGSTT VFQ T DEL RVAGADR
Sbjct:    2 VVRREGALSDADRARFGDMPPDTATTVRGAYPSPNPAAAAAVARTRSSTRGTMGVLYWQLSDTWQGPSWSTIEYDGAWKVSHYMVRRAFSIVSIAGTVVKRPRAAEQSGDGVVDDVEASWFECNLTSDLEGVVAGSYTVSVYLWDDDCDPVASWEGTVGPMSPGSTTNVFQVTTDELRRVAGADR 186          
BLAST of mRNA_Ecto-sp13_S_contig10326.324.1 vs. uniprot
Match: D7FZJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ6_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 2.960e-24
Identity = 54/59 (91.53%), Postives = 54/59 (91.53%), Query Frame = 0
Query:  260 MIVHMVFAETVEAGISNDAAPMAVERVESVYYLSSANAAESVTVDDLPETGLSWEVLPA 318
            MIVHMVF ETVEAG SND AP AVERVESVYYLSSANA ESVTVDDLPETGLSWEVLPA
Sbjct:    1 MIVHMVFEETVEAGTSNDTAPTAVERVESVYYLSSANATESVTVDDLPETGLSWEVLPA 59          
BLAST of mRNA_Ecto-sp13_S_contig10326.324.1 vs. uniprot
Match: A0A7S3C656_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C656_9EUKA)

HSP 1 Score: 88.6 bits (218), Expect = 6.770e-18
Identity = 50/136 (36.76%), Postives = 75/136 (55.15%), Query Frame = 0
Query:  118 RTRRSNKGTMGVLYWQLSDTWQGPSWSTIEYDGAWKVSHHMVRRAFSIVSIAGTVVKRPRTAETSTDSVEDDVEAS-LFECHMTSDLEEQVSGSYTVSVYLWD-DNCDPVASWGGTVGPMSPGSTTKVFQATIDEL 251
            R R S  GTMG+LYWQL+D WQGPSWS+IEYDG+ K++H+ V+R ++ + ++                    VEA+     H+TSDL     G+ T+S++LW  D   P AS       ++ GS+ +V+   +  L
Sbjct:   18 RLRSSPAGTMGILYWQLNDVWQGPSWSSIEYDGSAKLTHYAVKRVYAPLLLSA-------------------VEANGTLAVHLTSDLTTPTHGNLTLSIHLWTADGPAPAASHPPLAASVAAGSSDRVWSGDLAPL 134          
BLAST of mRNA_Ecto-sp13_S_contig10326.324.1 vs. uniprot
Match: A0A0M0J6X0_9EUKA (Beta-mannosidase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J6X0_9EUKA)

HSP 1 Score: 85.1 bits (209), Expect = 1.490e-14
Identity = 54/143 (37.76%), Postives = 72/143 (50.35%), Query Frame = 0
Query:  114 AAMARTRRSNKGTMGVLYWQLSDTWQGPSWSTIEYDGAWKVSHHMVRRAFSIVSIAGTVVKRPRTAETSTDSVEDDVEASLFECHMTSDLEEQVSGSYTVSVYLWDDNCDPVASWGGTVGPMSPG-STTKVFQATIDELSRVA 255
            A   R R     TMGVLYWQL+D W GPSWSTIE+DG  K+SHH V RAF+ V ++ T       A T            +   H+TSDL   +S +  + +Y W D+   V  W  T   ++P   T + +   ID+L   A
Sbjct:  814 AQWRRQRSMPTNTMGVLYWQLNDIWPGPSWSTIEFDGTPKLSHHGVARAFAPVLVSAT-----EAAGTG-----------MLTVHLTSDLTRDLSDNLDLEIYRWADS-PAVVLWRVTHLAVAPALGTQEGYTVNIDDLLAAA 939          
BLAST of mRNA_Ecto-sp13_S_contig10326.324.1 vs. uniprot
Match: A0A8J7NWP9_ATRSP (Beta-mannosidase (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7NWP9_ATRSP)

HSP 1 Score: 78.6 bits (192), Expect = 4.630e-13
Identity = 48/133 (36.09%), Postives = 71/133 (53.38%), Query Frame = 0
Query:  121 RSNKG-TMGVLYWQLSDTWQGPSWSTIEYDGAWKVSHHMVRRAFS-IVSIAGTVVKRPRTAETSTDSVEDDVEASLFECHMTSDLEEQVSGSYTVSVYLWDDNCDPVASWGGTVGPMSPGSTTKVFQATIDEL 251
            R  KG TMG LYWQL+D WQGPSWS+IEY G WK+ H+  +  F+ I+ +A                +ED+    +   +  SDL++ VS S  + VY W+ + +PV  +      +  GS T V++  + EL
Sbjct:   51 REGKGHTMGALYWQLNDIWQGPSWSSIEYGGKWKMLHYFAQNFFAPILPVA----------------LEDE---EILLIYAVSDLQKDVSLSILIKVYQWN-SMEPVYVFASNSTEVQAGSATLVYKEPVKEL 163          
BLAST of mRNA_Ecto-sp13_S_contig10326.324.1 vs. uniprot
Match: W5N2I8_LEPOC (Beta-mannosidase n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5N2I8_LEPOC)

HSP 1 Score: 77.4 bits (189), Expect = 5.260e-12
Identity = 47/133 (35.34%), Postives = 70/133 (52.63%), Query Frame = 0
Query:  121 RSNKG-TMGVLYWQLSDTWQGPSWSTIEYDGAWKVSHHMVRRAFS-IVSIAGTVVKRPRTAETSTDSVEDDVEASLFECHMTSDLEEQVSGSYTVSVYLWDDNCDPVASWGGTVGPMSPGSTTKVFQATIDEL 251
            R  KG TMG LYWQL+D WQGPSWS+IEY G WK+ H+  +  F+ I+ +A                +ED+    +   +  SDL++ VS S  + VY W+ + +PV  +      +  GS T  ++  + EL
Sbjct:  667 REGKGHTMGALYWQLNDIWQGPSWSSIEYGGKWKMLHYFAQNFFAPILPVA----------------LEDE---EILLIYAVSDLQKDVSLSVVIKVYQWN-SMEPVYVFASNSTEVQAGSATLAYKEPVKEL 779          
BLAST of mRNA_Ecto-sp13_S_contig10326.324.1 vs. uniprot
Match: A0A067R9Q3_ZOONE (Beta-mannosidase n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067R9Q3_ZOONE)

HSP 1 Score: 76.3 bits (186), Expect = 1.260e-11
Identity = 46/141 (32.62%), Postives = 65/141 (46.10%), Query Frame = 0
Query:  126 TMGVLYWQLSDTWQGPSWSTIEYDGAWKVSHHMVRRAFSIVSIAGTVVKRPRTAETSTDSVEDDVEASLFECHMTSDLEEQVSGSYTVSVYLWDDNCDPVASWGGTVGPMSPGSTTKVFQATIDELSRVAGADRMIVHMVF 266
            TMG LYWQL+D WQG SW+++E+ G WK+ H+  RR F+   ++ +V                   A   E H+ SD  E      TVSVY W+ +  P+     T   ++  S TKVF   + +    AG     V   F
Sbjct:  661 TMGALYWQLNDIWQGASWASLEFGGKWKMLHYFARRFFAPALVSPSVTS-----------------AGDLEIHLISDYLEDKETLLTVSVYKWN-SLTPINETSST-HTLNKASVTKVFSKNLLDHLNAAGCSEYAVKSCF 782          
BLAST of mRNA_Ecto-sp13_S_contig10326.324.1 vs. uniprot
Match: UPI0015609122 (beta-mannosidase isoform X1 n=7 Tax=Acipenseroidei TaxID=186622 RepID=UPI0015609122)

HSP 1 Score: 75.1 bits (183), Expect = 3.050e-11
Identity = 44/131 (33.59%), Postives = 68/131 (51.91%), Query Frame = 0
Query:  126 TMGVLYWQLSDTWQGPSWSTIEYDGAWKVSHHMVRRAFSIVSIAGTVVKRPRTAETSTDSVEDDVEASLFECHMTSDLEEQVSGSYTVSVYLWDDNCDPVASWGGTVGPMSPGSTTKVFQATIDELSRVAG 256
            TMG LYWQL+D WQGPSWS+IEY G WK+ H+  +  F+ V   G                 +D+E  +   +  SDL+  ++ S  V  YLW  + +PV   G T   +  GS + +++  +++L +  G
Sbjct:  669 TMGALYWQLNDIWQGPSWSSIEYGGKWKMLHYFAQNFFAPVLPVGF----------------EDIETLII--YGVSDLKNDLALSLLVKAYLWS-SMEPVCV-GVTDAVIKAGSASPIYKEPVNDLLKRCG 779          
BLAST of mRNA_Ecto-sp13_S_contig10326.324.1 vs. uniprot
Match: A0A444U3U9_ACIRT (Beta-mannosidase n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444U3U9_ACIRT)

HSP 1 Score: 75.1 bits (183), Expect = 3.620e-11
Identity = 44/131 (33.59%), Postives = 68/131 (51.91%), Query Frame = 0
Query:  126 TMGVLYWQLSDTWQGPSWSTIEYDGAWKVSHHMVRRAFSIVSIAGTVVKRPRTAETSTDSVEDDVEASLFECHMTSDLEEQVSGSYTVSVYLWDDNCDPVASWGGTVGPMSPGSTTKVFQATIDELSRVAG 256
            TMG LYWQL+D WQGPSWS+IEY G WK+ H+  +  F+ V   G                 +D+E  +   +  SDL+  ++ S  V  YLW  + +PV   G T   +  GS + +++  +++L +  G
Sbjct: 1973 TMGALYWQLNDIWQGPSWSSIEYGGKWKMLHYFAQNFFAPVLPVGF----------------EDIETLII--YGVSDLKNDLALSLLVKAYLWS-SMEPVCV-GVTDAVIKAGSASPIYKEPVNDLLKRCG 2083          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10326.324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLM5_9PHAE2.970e-14982.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZJ5_ECTSI3.530e-10283.24Similar to Mannosidase, beta A, lysosomal n=1 Tax=... [more]
D7FZJ6_ECTSI2.960e-2491.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3C656_9EUKA6.770e-1836.76Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A0M0J6X0_9EUKA1.490e-1437.76Beta-mannosidase n=1 Tax=Chrysochromulina tobinii ... [more]
A0A8J7NWP9_ATRSP4.630e-1336.09Beta-mannosidase (Fragment) n=1 Tax=Atractosteus s... [more]
W5N2I8_LEPOC5.260e-1235.34Beta-mannosidase n=2 Tax=Lepisosteus oculatus TaxI... [more]
A0A067R9Q3_ZOONE1.260e-1132.62Beta-mannosidase n=1 Tax=Zootermopsis nevadensis T... [more]
UPI00156091223.050e-1133.59beta-mannosidase isoform X1 n=7 Tax=Acipenseroidei... [more]
A0A444U3U9_ACIRT3.620e-1133.59Beta-mannosidase n=1 Tax=Acipenser ruthenus TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.80coord: 21..163
e-value: 2.1E-15
score: 59.1
NoneNo IPR availablePANTHERPTHR43730FAMILY NOT NAMEDcoord: 118..272
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 116..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10326contigEcto-sp13_S_contig10326:717..5435 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10326.324.1mRNA_Ecto-sp13_S_contig10326.324.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10326 565..5435 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10326.324.1 ID=prot_Ecto-sp13_S_contig10326.324.1|Name=mRNA_Ecto-sp13_S_contig10326.324.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=318bp
MATAVVKPTASTTAMATAVVKPTNERDEMSKRTTTSTAAAAEAQRKKRTA
TTSGFQEEEVSSGMRDGAGHNVHHRMVQGEGALSDADRARFGNMPPEKAT
AVRGAYPSPNPAGAAMARTRRSNKGTMGVLYWQLSDTWQGPSWSTIEYDG
AWKVSHHMVRRAFSIVSIAGTVVKRPRTAETSTDSVEDDVEASLFECHMT
SDLEEQVSGSYTVSVYLWDDNCDPVASWGGTVGPMSPGSTTKVFQATIDE
LSRVAGADRMIVHMVFAETVEAGISNDAAPMAVERVESVYYLSSANAAES
VTVDDLPETGLSWEVLPA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF