prot_Ecto-sp13_S_contig14164.3238.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14164.3238.1
Unique Nameprot_Ecto-sp13_S_contig14164.3238.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length794
Homology
BLAST of mRNA_Ecto-sp13_S_contig14164.3238.1 vs. uniprot
Match: D8LAX6_ECTSI (Outermembrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX6_ECTSI)

HSP 1 Score: 971 bits (2511), Expect = 0.000e+0
Identity = 684/800 (85.50%), Postives = 693/800 (86.62%), Query Frame = 0
Query:    1 QEDVRVARQGHAAVCHQRRVLVLGGVSEGTEFMNDCLDDTPGATLNNGTLVVGGGAALRRPSHDGEGGRGSATSFGYAEGXXXXXXX----LSRRPSSRASRHQSMEDDLWGWFGDDRPPSETALHAMARGDAAESAAGGGIGVNGSAAENAGVTVSTLALMERLAKLSAGRVLLDRVRADTRSLASVVTSAVHSAFLGEGVDAAAAAAAADVSGAAGTAEESCPATRAVHFEAGCSPPGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VDENGSSGSSGLGLAAAPEATGDDEKSGGQARGLRQRVVEARAEIEGLQREIRRLVRGVGEGGHAEETRARVAPLVERRAVLAQAARADAERMAKRLQEISEAQQSNHSNVDSAMREVERRARTAGGRVWALIRVQSRQHSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAPEWVLSRLELTRMRRRGSFLDGDEVGPVRSATAAAEAXXXXXXXXXX-EASTADSFGHLARLASVDGDGDRRDTDEAVSDLRDAMEQHSAALSRLARWMVNVAPPPSP---PAGGSEAGLMAAAPMENHSAAVGVEAHGDLPSPSCPGLSGDSGFEVAGSSSEEDGVRVMLELSRESDVLESRVKRERFKAHRAADEEIHRTPEMYREACALGNALILKGHDYLSQALAEAGRDSAEASIMAEEASAWAGTVGELVDAEGLAAKGLALKAKVKDLRNSVLDQEDVVTDCEGALDKRRRRGAKADELEPLQV 790
            +EDVRVARQ                VSEGTEFMNDCL DTPGA LNNGTLVVG                           XXXXXXX    LSRRPSSRASRHQSMEDDLWGWFGDDRPPSETALHAMARGDAAESAA GGIGVNGSAAENAGVTVSTLAL ERLAKLSAGRVLLDRVRADTRSLASVVTSAVHSAFLGEGV AA       VSG A TA+ SCPATRAVHF AGCSPPGGR         XXXXXXXXXXXXXXXXXXXXXXX    VDENGSSG+SGLGLAAA E+TGDDEKSGGQA GLRQRVVEARAEIEGLQREIRRLVRG GEGGHAEETRARVAPLVERRAVLA AARADAERMAKRLQEISEAQQSNHSNVDSAMREVERRARTAGGRVWALIR QSRQHSSXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAAPEWVLSRLELTRMRRRGSFLDGDEVGPVR+A A AE XXXXXXXXXX EASTADSFGHLARLASVDGDGDRRDTDEAVS+LRDAMEQHSAALSRLA WM NVAP       PAGGSEAGLMAAAPMENH AAVGVEAHGDLPSPSCPG SG+SGFEVAGSSSEEDGVR MLELSRESDVLESRVKRERFKAHRAADEEIHRTPEMYREACALGNALILKGHDYLSQALAEAGRDSAEASIMAEEASAWAGTVGELVDAEGLAAKGLALKAKV++LRNSVLDQEDVVTDCEGALDKRRRRGAKADELEPLQ 
Sbjct:  149 EEDVRVARQXXXXXXXXXXXXXXXXVSEGTEFMNDCLADTPGAILNNGTLVVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRRPSSRASRHQSMEDDLWGWFGDDRPPSETALHAMARGDAAESAAAGGIGVNGSAAENAGVTVSTLALTERLAKLSAGRVLLDRVRADTRSLASVVTSAVHSAFLGEGVAAAXXXXXXXVSGKAVTAQVSCPATRAVHFTAGCSPPGGRQRLRSGAEAXXXXXXXXXXXXXXXXXXXXXXXVASSVDENGSSGASGLGLAAAAESTGDDEKSGGQAGGLRQRVVEARAEIEGLQREIRRLVRGGGEGGHAEETRARVAPLVERRAVLAPAARADAERMAKRLQEISEAQQSNHSNVDSAMREVERRARTAGGRVWALIRGQSRQHSSXXXXXXXXXXXXXXXXLNPVTEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AAAPEWVLSRLELTRMRRRGSFLDGDEVGPVRAAAAGAEXXXXXXXXXXXGEASTADSFGHLARLASVDGDGDRRDTDEAVSELRDAMEQHSAALSRLAGWMFNVAPXXXXXXLPAGGSEAGLMAAAPMENHPAAVGVEAHGDLPSPSCPGPSGESGFEVAGSSSEEDGVRAMLELSRESDVLESRVKRERFKAHRAADEEIHRTPEMYREACALGNALILKGHDYLSQALAEAGRDSAEASIMAEEASAWAGTVGELVDAEGLAAKGLALKAKVEELRNSVLDQEDVVTDCEGALDKRRRRGAKADELEPLQA 947          
BLAST of mRNA_Ecto-sp13_S_contig14164.3238.1 vs. uniprot
Match: A0A6H5JNX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX3_9PHAE)

HSP 1 Score: 913 bits (2359), Expect = 9.510e-309
Identity = 647/853 (75.85%), Postives = 659/853 (77.26%), Query Frame = 0
Query:    1 QEDVRVARQGHAAVCHQRRVLVLGGVSEGTEFMNDCLDDTPGATLNNGTLVVGGGAALRRPSHDGEGGRGSAT----------------------------------------------------SFGYAEGXXXXXXX-------LSRRPSSRASRHQSMEDDLWGWFGDDRPPSETALHAMARGDAAESAAGGGIGVNGSAAENAGVTVSTLALMERLAKLSAGRVLLDRVRADTRSLASVVTSAVHSAFLGEGVDAAAAAAAADVSGAAGTAEESCPATRAVHFEAGCSPPGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV----DENGSSGSSGLGLAAAPEATGDDEKSGGQARGLRQRVVEARAEIEGLQREIRRLVRGVGEGGHAEETRARVAPLVERRAVLAQAARADAERMAKRLQEISEAQQSNHSNVDSAMREVERRARTAGGRVWALIRVQSRQHSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAPEWVLSRLELTRMRRRGSFLDGDEVGPVRSATAAAEAXXXXXXXXXXEASTADSFGHLARLASVDGDGDRRDTDEAVSDLRDAMEQHSAALSRLARWMVNVAPPPSPPAGGSEAGLMAAAPMENHSAAVGVEAHGDLPSPSCPGLSGDSGFEVAGSSSEEDGVRVMLELSRESDVLESRVKRERFKAHRAADEEIHRTPEMYREACALGNALILKGHDYLSQALAEAGRDSAEASIMAEEASAWAGTVGELVDAEGLAAKGLALKAKVKDLRNSVLDQEDVVTDCEGALDKRRRRGAKADELEPLQV 790
            +EDVRVARQ                VSEGTEFMNDCL     A L  G L   G +                                                                     SFG+   XXXXXXX       LSRRPSSRASRH+S+EDDLWGWFGDDRPPSETALHAMARGDAAESAA GG+GVNGSAAENAGVTVSTLAL ERLAKLSAGRVLLDRVRADTRSLASVVTSAVHSAFLGEGV AAAA  A  +SGAA TAE  CPATRAVHFEAGCSPPGGR                 XXXXXXXXXXXXXXXXXV    DENGSSG+SGLGLAAA EATGDDEKSGGQA GLRQRVVEARAEIEGLQREIRRL RG GEGGHAEETRARVAPLVERRAVLAQAARADAERMAKRLQEISEAQQSNHSNVDSAMREVERRARTAGGRVWALIR QSRQHSS XXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXX                  AAAPEWVLSRLELTRMRRRGSFLDGDEVGPVR+A AA EAXXXXXXXX  EASTADSF HLARLAS DGDG+RRDTDEAVS LRDAMEQHSAALSRLA WMVNVAP        SEAGLMAAA  E H AAVGVEAHG LPSPS PGLSGDSGFEVAGSSSEEDGVR MLELSRESDVLE RVKRERFKAHRAADEEIHRTPEMYREACALGNALILKGHDYLSQALAEAGRDSAEASIMAEEASAWAGTVGELVDAEGLAAKGLALKAKV++LRNSVLD EDVVTDCEGALDKRRRRGAKADELEPLQ 
Sbjct:  265 EEDVRVARQXXXXXXXXXXXXXXXXVSEGTEFMNDCLAGASSAQLTAGALREQGASTTSTXXXXXXXXXXXXXXXTALLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFGFXXXXXXXXXXXXXXXXXLSRRPSSRASRHESVEDDLWGWFGDDRPPSETALHAMARGDAAESAAAGGVGVNGSAAENAGVTVSTLALTERLAKLSAGRVLLDRVRADTRSLASVVTSAVHSAFLGEGVAAAAAXXA--MSGAAVTAEVRCPATRAVHFEAGCSPPGGRRRLRPGAEAVAEAKQTEXXXXXXXXXXXXXXXXXVASSVDENGSSGASGLGLAAAAEATGDDEKSGGQASGLRQRVVEARAEIEGLQREIRRLARGGGEGGHAEETRARVAPLVERRAVLAQAARADAERMAKRLQEISEAQQSNHSNVDSAMREVERRARTAGGRVWALIRGQSRQHSSDXXXXXXXXXXXXXXXXLNPGAXXXXXXXXXXXXXXXXXXXXXXXXXX------------------AAAPEWVLSRLELTRMRRRGSFLDGDEVGPVRAAAAATEAXXXXXXXXG-EASTADSFAHLARLASEDGDGERRDTDEAVSGLRDAMEQHSAALSRLAGWMVNVAPXXXXXXXXSEAGLMAAAQTEIHPAAVGVEAHGGLPSPSYPGLSGDSGFEVAGSSSEEDGVRAMLELSRESDVLEGRVKRERFKAHRAADEEIHRTPEMYREACALGNALILKGHDYLSQALAEAGRDSAEASIMAEEASAWAGTVGELVDAEGLAAKGLALKAKVEELRNSVLDLEDVVTDCEGALDKRRRRGAKADELEPLQA 1096          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14164.3238.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAX6_ECTSI0.000e+085.50Outermembrane protein n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JNX3_9PHAE9.510e-30975.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 303..330
NoneNo IPR availableCOILSCoilCoilcoord: 355..379

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14164contigEcto-sp13_S_contig14164:297..4442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14164.3238.1mRNA_Ecto-sp13_S_contig14164.3238.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14164 297..4442 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14164.3238.1 ID=prot_Ecto-sp13_S_contig14164.3238.1|Name=mRNA_Ecto-sp13_S_contig14164.3238.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=794bp
QEDVRVARQGHAAVCHQRRVLVLGGVSEGTEFMNDCLDDTPGATLNNGTL
VVGGGAALRRPSHDGEGGRGSATSFGYAEGGGGGGAALSRRPSSRASRHQ
SMEDDLWGWFGDDRPPSETALHAMARGDAAESAAGGGIGVNGSAAENAGV
TVSTLALMERLAKLSAGRVLLDRVRADTRSLASVVTSAVHSAFLGEGVDA
AAAAAAADVSGAAGTAEESCPATRAVHFEAGCSPPGGRRRLPGEEGGSEA
KQTEEEEEEEEGKEGGEEVASSVDENGSSGSSGLGLAAAPEATGDDEKSG
GQARGLRQRVVEARAEIEGLQREIRRLVRGVGEGGHAEETRARVAPLVER
RAVLAQAARADAERMAKRLQEISEAQQSNHSNVDSAMREVERRARTAGGR
VWALIRVQSRQHSSDDDDDDDDEGDESNDGLSPSTEGGGSAGAGGGGGGE
ATASTRTAGGGGGLFPSEHDGGGGGGGGGDAAAPEWVLSRLELTRMRRRG
SFLDGDEVGPVRSATAAAEAAAVSAAAAAGEASTADSFGHLARLASVDGD
GDRRDTDEAVSDLRDAMEQHSAALSRLARWMVNVAPPPSPPAGGSEAGLM
AAAPMENHSAAVGVEAHGDLPSPSCPGLSGDSGFEVAGSSSEEDGVRVML
ELSRESDVLESRVKRERFKAHRAADEEIHRTPEMYREACALGNALILKGH
DYLSQALAEAGRDSAEASIMAEEASAWAGTVGELVDAEGLAAKGLALKAK
VKDLRNSVLDQEDVVTDCEGALDKRRRRGAKADELEPLQVWDR*
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