prot_Ecto-sp13_S_contig1416.3236.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1416.3236.1
Unique Nameprot_Ecto-sp13_S_contig1416.3236.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length314
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1416.3236.1 vs. uniprot
Match: D7FP02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP02_ECTSI)

HSP 1 Score: 530 bits (1364), Expect = 1.050e-188
Identity = 277/311 (89.07%), Postives = 283/311 (91.00%), Query Frame = 0 
Query:    1 MLVTP-LNDAVFKDTVAKHGSFPVRASERSAYVIDGLAAGQAYDVFFVVEGLKGVRSSLPINDDLESDTWYQVSAVSERAEGVYSQPVYAVAKTHREPARVLDWKTTPVHGSTDSLSLLISLDCSSAPTHEACGILRYEVTEKPPKGSPENAKSRQVAQGTAVVADGRTTPHVVSGLSPGKAHSISMAIETPGSNGAYGPTMEVVATTFPRAPRLVTLDAARSDTEASTVIVRYKISEARREHFLLARMPSIMRPGVIHVSLVERVGHPLALIGTMIGNQHGVGFSVEVGMSSGDDEEEQGSDAALEGSQV 310
            MLV P LNDAVFKDTVAKHGSFPVRASERSAYVIDGLAAGQAYDVFFV+EGLKGVRS LPINDDLESDTWYQVSAVSERAEGVYSQP YAVAKTHREPARVLDWK TPVHGSTDSLSLLI LDCSSAPTHEACG LRYEVTEKPPKGSP NAK RQVAQGTAVVADGR TPHVVSGLSPGKAHSISMAIETPGSNGAYGPTMEV ATTFPRAPRLVTLDAARSDTEASTVIVRYK+SE                PGV+HVSLVERVGHPLALIGTMIGNQHGVGFSVEVGMS+GD+EEE GSD+ALEGSQV
Sbjct:    1 MLVAPSLNDAVFKDTVAKHGSFPVRASERSAYVIDGLAAGQAYDVFFVIEGLKGVRSPLPINDDLESDTWYQVSAVSERAEGVYSQPAYAVAKTHREPARVLDWKATPVHGSTDSLSLLIRLDCSSAPTHEACGTLRYEVTEKPPKGSPANAKPRQVAQGTAVVADGRLTPHVVSGLSPGKAHSISMAIETPGSNGAYGPTMEVAATTFPRAPRLVTLDAARSDTEASTVIVRYKLSE----------------PGVVHVSLVERVGHPLALIGTMIGNQHGVGFSVEVGMSAGDEEEEDGSDSALEGSQV 295
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1416.3236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FP02_ECTSI1.050e-18889.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 62..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1416contigEcto-sp13_S_contig1416:7233..10107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1416.3236.1mRNA_Ecto-sp13_S_contig1416.3236.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1416 7233..10107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1416.3236.1 ID=prot_Ecto-sp13_S_contig1416.3236.1|Name=mRNA_Ecto-sp13_S_contig1416.3236.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=314bp
MLVTPLNDAVFKDTVAKHGSFPVRASERSAYVIDGLAAGQAYDVFFVVEG
LKGVRSSLPINDDLESDTWYQVSAVSERAEGVYSQPVYAVAKTHREPARV
LDWKTTPVHGSTDSLSLLISLDCSSAPTHEACGILRYEVTEKPPKGSPEN
AKSRQVAQGTAVVADGRTTPHVVSGLSPGKAHSISMAIETPGSNGAYGPT
MEVVATTFPRAPRLVTLDAARSDTEASTVIVRYKISEARREHFLLARMPS
IMRPGVIHVSLVERVGHPLALIGTMIGNQHGVGFSVEVGMSSGDDEEEQG
SDAALEGSQVNEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036116FN3_sf