mRNA_Ecto-sp13_S_contig14154.3232.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14154.3232.1 vs. uniprot
Match: A0A6H5L781_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L781_9PHAE) HSP 1 Score: 393 bits (1009), Expect = 9.310e-130 Identity = 212/223 (95.07%), Postives = 214/223 (95.96%), Query Frame = 1
Query: 1 MMRRPTAARTERSAARAANGGGDGVGRGDVIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLITGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGQSLGLNQAAQSMARVVSPV-------WSKRRQQLPLGALPYLVGSVFPLVGVAVPFWLYLRSVEAK 648
MMRRPT+A TERSAARAANGGGD VGRGDVIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLITGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQG+SLGLNQAAQSMARVVSPV WSKRRQQLPLGALPYLVGSVFPLVGVAVPFWLYLRSVEAK
Sbjct: 546 MMRRPTSATTERSAARAANGGGD-VGRGDVIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLITGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPVVAGVLYEWSKRRQQLPLGALPYLVGSVFPLVGVAVPFWLYLRSVEAK 767
BLAST of mRNA_Ecto-sp13_S_contig14154.3232.1 vs. uniprot
Match: D8LSY4_ECTSI (Major facilitator transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSY4_ECTSI) HSP 1 Score: 365 bits (938), Expect = 2.510e-126 Identity = 189/193 (97.93%), Postives = 191/193 (98.96%), Query Frame = 1
Query: 70 GVGRGDVIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLITGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGQSLGLNQAAQSMARVVSPVWSKRRQQLPLGALPYLVGSVFPLVGVAVPFWLYLRSVEAK 648
G+GRGDVIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLI GNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQG+SLGLNQAAQSMARVVSPVWSKRR QLPLGALPYLVGSVFPLVGVAVPFWLYLRSVEAK
Sbjct: 28 GIGRGDVIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLIAGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPVWSKRRLQLPLGALPYLVGSVFPLVGVAVPFWLYLRSVEAK 220
BLAST of mRNA_Ecto-sp13_S_contig14154.3232.1 vs. uniprot
Match: A0A836CM96_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM96_9STRA) HSP 1 Score: 226 bits (576), Expect = 2.000e-71 Identity = 119/196 (60.71%), Postives = 151/196 (77.04%), Query Frame = 1
Query: 85 DVIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLITGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGQSLGLNQAAQSMARVVSPVWS--------KRRQQLPLGALPYLVGSVFPLVGVAVPFWLYLRSVEAK 648
D+IP V+LL NGFLL+YAFSIETIYAMF+KDNFGYG + LS +FA+NGV VG LQL+ MRHLV +GKHM+L +GN+ LA GM+G++ R+ +HF LF+VHI+GYS+ADTALV+LISRYA QG+SLGLNQAAQS ARV+SP+ + K + LP GALPY+VGSV PL+ +A P LY+ S++ K
Sbjct: 29 DIIPPEVLLLAMNGFLLVYAFSIETIYAMFMKDNFGYGHATLSTLFAVNGVLVGFLQLVLMRHLVAKMGKHMLLASGNLLLALGMLGLSLVRYTPLHFLLFSVHILGYSMADTALVSLISRYAGSNAQGRSLGLNQAAQSTARVISPLVAGYLYTNSKKLAEGLPPGALPYVVGSVMPLLAIAAPLILYMGSIDRK 224
BLAST of mRNA_Ecto-sp13_S_contig14154.3232.1 vs. uniprot
Match: A0A7S3UWB2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWB2_HETAK) HSP 1 Score: 232 bits (592), Expect = 6.680e-70 Identity = 120/194 (61.86%), Postives = 151/194 (77.84%), Query Frame = 1
Query: 88 VIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLITGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGQSLGLNQAAQSMARVVSPVW-------SKRRQQLPLGALPYLVGSVFPLVGVAVPFWLYLRSVEAK 648
V+P V+LL GNGFLLMYAF++ET+YA FLKDNFGYGESVL+ +F LNG++VG+LQ+ ++ LV LGKHM+L+ GN LAAGMVG+A R P+VHFA+F+VHI+GY++ADTAL +LISRY+SP TQG LGLNQA QS AR++SP+ SKR LP+GALPYL G+ PL+ V PF+LY RSV K
Sbjct: 331 VVPFPVLLLTGNGFLLMYAFAVETVYAAFLKDNFGYGESVLATLFVLNGMSVGMLQVFFIKKLVNKLGKHMLLVLGNALLAAGMVGLALIRQPLVHFAMFSVHILGYAIADTALSSLISRYSSPDTQGTHLGLNQAVQSFARMISPLVAGALYQRSKRAGALPVGALPYLAGAAAPLLAVLPPFFLYARSVNKK 524
BLAST of mRNA_Ecto-sp13_S_contig14154.3232.1 vs. uniprot
Match: A0A4D9D6H6_9STRA (MFS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6H6_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.040e-61 Identity = 109/190 (57.37%), Postives = 147/190 (77.37%), Query Frame = 1
Query: 103 VMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLITGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGQSLGLNQAAQSMARVVSPV-------WSKRR-QQLPLGALPYLVGSVFPLVGVAVPFWLYLRSVEAK 648
V LL+ NGFLLMYAFS+ET+YAMF+KDNFGYGE+ L VFALNG+AVG+LQ+ +++L LGKH+ML GN+ LA GMVG++ R+ + HF++F++HI+GY+++DTAL +LISRY++P QG++LG + AAQS AR++SP+ WSK LP GALPY+ GS FPL+GV VP LYL+S+E K
Sbjct: 426 VRLLILNGFLLMYAFSVETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTVLYLKSIERK 615
BLAST of mRNA_Ecto-sp13_S_contig14154.3232.1 vs. uniprot
Match: A0A482SL66_9ARCH (MFS transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SL66_9ARCH) HSP 1 Score: 209 bits (532), Expect = 2.570e-61 Identity = 107/193 (55.44%), Postives = 141/193 (73.06%), Query Frame = 1
Query: 91 IPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLITGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGQSLGLNQAAQSMARVVSPV-------WSKRRQQLPLGALPYLVGSVFPLVGVAVPFWLYLRSVEAK 648
IP V+LLV NGF +MYAF+ ETIYAMF+KD+FGYGE LS +FA+NG +GV Q+ ++ L+ +LGKH L GN LA GM+GVA R +HF LF +H++GYS+ADTAL +LI++Y+SPA QG+ L LNQA QS ARVVSP+ WSK+ LP+GALP+L G++ P V VAVP LY++S+ +K
Sbjct: 328 IPLEVLLLVLNGFSIMYAFATETIYAMFIKDSFGYGEQALSTLFAVNGFFIGVFQVFLIKPLIHMLGKHATLAFGNFLLALGMIGVALVRERTLHFLLFALHVVGYSIADTALASLITKYSSPANQGRDLALNQACQSCARVVSPLLAGILYEWSKKSAMLPMGALPFLAGALCPAVAVAVPSLLYVKSIASK 520
BLAST of mRNA_Ecto-sp13_S_contig14154.3232.1 vs. uniprot
Match: K8YQK8_NANGC (Major facilitator superfamily mfs 1 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQK8_NANGC) HSP 1 Score: 172 bits (437), Expect = 2.810e-51 Identity = 89/165 (53.94%), Postives = 124/165 (75.15%), Query Frame = 1
Query: 178 KDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLITGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGQSLGLNQAAQSMARVVSPV-------WSKRR-QQLPLGALPYLVGSVFPLVGVAVPFWLYLRSVEAK 648
+DNFGYGE+ L VFALNG+AVG+LQ+ +++L LGKH+ML GN+ LA GMVG++ R+ + HF++F++HI+GY+++DTAL +LISRY++P QG++LG + AAQS AR++SP+ WSK LP GALPY+ GS FPL+GV VP LYL+S+E K
Sbjct: 4 RDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTVLYLKSIERK 168
BLAST of mRNA_Ecto-sp13_S_contig14154.3232.1 vs. uniprot
Match: A0A7S1UC38_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC38_9STRA) HSP 1 Score: 128 bits (321), Expect = 2.920e-31 Identity = 68/181 (37.57%), Postives = 105/181 (58.01%), Query Frame = 1
Query: 109 LLVGNGFLLMYAFS--IETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLITGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGQSLGLNQAAQSMARVVSPVWSKRRQQLPLGALPYLVGSVFPLVGVAVPFWLYLRSVEA 645
LL+ N M+A S I+ +YA+FLK+ FG LS ++A NG+ VG L + ++H+VR LG HMML+ N+ + G+ +A + +HFA F ++I +SL D A V+L++ Y + G+ G+ A SMAR+ +P + R Q LP+L G+ FPL+ PF L++R A
Sbjct: 261 LLLANSMFTMFALSGCIDGVYAVFLKERFGLASKALSGIYAFNGLLVGCLNVFALKHMVRALGSHMMLVAANVIASVGLASIAMAQQTTLHFASFCLYITAFSLGDVAFVSLLTSYVDSSRIGRLFGMKVALDSMARIAAPAIASRLFQQSQ-TLPFLCGAAFPLMSAVFPFTLWMRKRRA 440
BLAST of mRNA_Ecto-sp13_S_contig14154.3232.1 vs. uniprot
Match: UPI0019A3D0F8 (MFS transporter n=3 Tax=Cyanobacteria TaxID=1117 RepID=UPI0019A3D0F8) HSP 1 Score: 66.2 bits (160), Expect = 3.530e-9 Identity = 60/187 (32.09%), Postives = 90/187 (48.13%), Query Frame = 1
Query: 94 PRAVMLLVGNGFLLMYAFS-IETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLITGNMCLAAGMVGVAF-------CRHPVVHFALFTVHIM---GYSLADTALVALISRYASPATQGQSLGLNQAAQSMARVVSPVWSKRRQQLPLGALPYLVGSVFPLVGVAVPFW 621
PR LL+ F+ +AF+ +I+ +FL D +G+G S + VF G+ V+Q +R L+ G+ + I G G+V +AF R P++ AL+T + G L +L LIS S QG++LG NQA QS+A ++ P+W+ G VF GV PFW
Sbjct: 217 PRIQGLLIAF-FIFNFAFAGFSSIFVLFLNDRYGWGPSQAAAVFFFIGIVSTVVQGGLIRSLLPRFGESKLAIGG-----LGLVAIAFGGIVLIPARGPILVPALYTTQALLALGVGLIIPSLRGLISNRVSDQEQGKTLGGNQALQSVATILGPLWA---------------GWVFDHSGVLSPFW 382
BLAST of mRNA_Ecto-sp13_S_contig14154.3232.1 vs. uniprot
Match: A0A2H0PHM6_9DELT (MFS domain-containing protein n=1 Tax=Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_47_16 TaxID=1973975 RepID=A0A2H0PHM6_9DELT) HSP 1 Score: 63.9 bits (154), Expect = 2.160e-8 Identity = 48/169 (28.40%), Postives = 83/169 (49.11%), Query Frame = 1
Query: 94 PRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLITGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGQSLGLNQAAQSMARVVSPVWSKRRQQLPLGALPYLVGSVFPLV 600
P M+L+ N ++M +E YA + D FG +S + VF G+ V +Q +R + LLG +++ G LA G++ + +H F + +G L A+ +IS+ AS A QG+++G++ + S+AR P Q ++PY+V V L+
Sbjct: 224 PAGRMVLM-NALIIMAFAQMEATYAYLMVDRFGLDKSSIYWVFGGLGLTVAFVQGGLVRRIEPLLGDRKLILWGGAALAIGLIMLPVGQHIAWLFGFSLLMALGNGLVSPAMTGVISKSASGAVQGETMGVSASMGSLARFAGPALGLVLYQYWGVSVPYVVAGVMILM 391 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14154.3232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14154.3232.1 >prot_Ecto-sp13_S_contig14154.3232.1 ID=prot_Ecto-sp13_S_contig14154.3232.1|Name=mRNA_Ecto-sp13_S_contig14154.3232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=216bp MMRRPTAARTERSAARAANGGGDGVGRGDVIPRAVMLLVGNGFLLMYAFSback to top mRNA from alignment at Ecto-sp13_S_contig14154:1322..3968+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14154.3232.1 ID=mRNA_Ecto-sp13_S_contig14154.3232.1|Name=mRNA_Ecto-sp13_S_contig14154.3232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2647bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14154:1322..3968+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14154:1322..3968+ >mRNA_Ecto-sp13_S_contig14154.3232.1 ID=mRNA_Ecto-sp13_S_contig14154.3232.1|Name=mRNA_Ecto-sp13_S_contig14154.3232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=648bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14154:1322..3968+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |