prot_Ecto-sp13_S_contig14149.3228.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14149.3228.1
Unique Nameprot_Ecto-sp13_S_contig14149.3228.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length348
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14149.3228.1 vs. uniprot
Match: A0A6H5K1Y5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Y5_9PHAE)

HSP 1 Score: 525 bits (1352), Expect = 7.980e-183
Identity = 282/318 (88.68%), Postives = 288/318 (90.57%), Query Frame = 0 
Query:   24 DLQDQEHAAGGRRGGLLGRAFQQAKRIGEIVDPDAVANAEQAWKELAPDLRQAADDLLRSKEEILSAGTEAKGILSAAKETWSGLGAVKTDRTAADSSATFAQEKEEEGSVTVGWGGLKKDIERAAQGVFGDVFGEAADEVLASFETRLSEALSEGNVRAASQLWRRLLDTPGIQLLAQDRRLWAGAEKAVRRYLSGFLSEKSAKEAQRAVNATADFALHFAGLSRNAAKSDHEVFEELSHKLCHLQGAAEKLWPLTVLALPLLGYQDYATTLESAIRSNALSRVTQTVSASVLLGLNPRDPFLLTLIASFSLGHLSK 341
            DLQDQEH AGGRRGGLLGRAFQQAKRIGEIV+PDAVANAEQAWKELAPDLRQAADD              A+ I        SG GAV+TDRTAADSSATFAQE+EE GSVTVGW GLKKDIERAAQGVFGDVFGEAADEVLASFETRLSEALSEGNVRAASQLWRRLLDTPG+QLLAQDRRLWAGAEKAVRRYLSGFLSEKSAKEAQRAVNATADFALHFAGLSRNAAKSDHEVFEELSHKLCHLQGAAEKLWPL VLALPLLGYQDYA  LESAIRSNALSRVTQTVSA+VLLGLNPRDPFLLTLIASFSLGHLSK
Sbjct:    2 DLQDQEHTAGGRRGGLLGRAFQQAKRIGEIVNPDAVANAEQAWKELAPDLRQAADDXXXXXXXXXXXXXXARDIWXXXXXXXSGFGAVETDRTAADSSATFAQEREEGGSVTVGWEGLKKDIERAAQGVFGDVFGEAADEVLASFETRLSEALSEGNVRAASQLWRRLLDTPGVQLLAQDRRLWAGAEKAVRRYLSGFLSEKSAKEAQRAVNATADFALHFAGLSRNAAKSDHEVFEELSHKLCHLQGAAEKLWPLAVLALPLLGYQDYAKKLESAIRSNALSRVTQTVSATVLLGLNPRDPFLLTLIASFSLGHLSK 319
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14149.3228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1Y5_9PHAE7.980e-18388.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..347
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.777

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14149contigEcto-sp13_S_contig14149:371..4334 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14149.3228.1mRNA_Ecto-sp13_S_contig14149.3228.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14149 371..4334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14149.3228.1 ID=prot_Ecto-sp13_S_contig14149.3228.1|Name=mRNA_Ecto-sp13_S_contig14149.3228.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=348bp
MRSGARLCTLVLCVTCMVVRGQADLQDQEHAAGGRRGGLLGRAFQQAKRI
GEIVDPDAVANAEQAWKELAPDLRQAADDLLRSKEEILSAGTEAKGILSA
AKETWSGLGAVKTDRTAADSSATFAQEKEEEGSVTVGWGGLKKDIERAAQ
GVFGDVFGEAADEVLASFETRLSEALSEGNVRAASQLWRRLLDTPGIQLL
AQDRRLWAGAEKAVRRYLSGFLSEKSAKEAQRAVNATADFALHFAGLSRN
AAKSDHEVFEELSHKLCHLQGAAEKLWPLTVLALPLLGYQDYATTLESAI
RSNALSRVTQTVSASVLLGLNPRDPFLLTLIASFSLGHLSKVSNADR*
back to top