prot_Ecto-sp13_S_contig14142.3226.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14142.3226.1
Unique Nameprot_Ecto-sp13_S_contig14142.3226.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length367
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14142.3226.1 vs. uniprot
Match: D7G6H3_ECTSI (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6H3_ECTSI)

HSP 1 Score: 539 bits (1388), Expect = 2.600e-188
Identity = 303/367 (82.56%), Postives = 315/367 (85.83%), Query Frame = 0 
Query:    1 MTSRGLNATAGAAASARCIKIVVSIALLRDVVAWRNGACLQWLRGPPVSRQIRAHRRSRALPGSLSPHRDSWCRSPMDHPTTSRQRRCRLRSSSTVKDWPLAPQRSPSSTADFVDREEQEPVTALASVGALRNGRSGETTNRLAGDTEGDAHQTHGGSNRCRRKRQRXXQQLRLQTLGDIEVGAAEALSAMEANIVEAESLGLATAIRPSTGVGAAAAPSVVDNKANVANRERRQRQQQLLQVDGVVSTDEIATGDDVDTDLPRFGGQDVSCSGPGSFSEEHSSTSTRTRPAATGELEGSQLMADQAETLLQGGHSKAVQEIFASEVPKYSEEDDDRFMRMALRLAGRARMEGEVPIGAILAETVPT 367
            MTSRGLNA AGAA SARCI ++VSIA+LRDVVAWRNGACLQ LRGPPVS QIRAHRRS+ L GSLSPHRDS  +S   HPTTSR+RR RLRS STV DWPL+PQRSP ST D  DREE EPVTA+ASVGALRNG S ET N  A DT G AHQT GGSNRCRRKR  XX   RLQTLGDIEV AAE LSAME +IVEAESLGL TAIRPSTGVGAA AP VVDN+ANVANRERRQRQQQLLQVDGVVSTDEIAT DD DTDL R GG+DVSCSG G FSEE SSTSTR RP ATG LE SQLMA+QAETLLQGGHSKAVQE FASEVPKYSEEDDDRFMRMALRLAGRARMEGEVPIGAILAETVPT
Sbjct:    1 MTSRGLNAAAGAAVSARCITLIVSIAVLRDVVAWRNGACLQRLRGPPVSGQIRAHRRSKGLSGSLSPHRDSGRQSAKHHPTTSRRRRGRLRSGSTVHDWPLSPQRSPPSTPDVADREEHEPVTAVASVGALRNGTSAETMNHRAADTVGLAHQTQGGSNRCRRKRXXXXXXXRLQTLGDIEVEAAEGLSAMEPSIVEAESLGLETAIRPSTGVGAAVAPGVVDNEANVANRERRQRQQQLLQVDGVVSTDEIATRDDADTDLSRSGGKDVSCSGSGFFSEERSSTSTRARPLATGGLESSQLMAEQAETLLQGGHSKAVQENFASEVPKYSEEDDDRFMRMALRLAGRARMEGEVPIGAILAETVPT 367
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14142.3226.1 vs. uniprot
Match: A0A6H5L744_9PHAE (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L744_9PHAE)

HSP 1 Score: 493 bits (1269), Expect = 1.160e-170
Identity = 275/322 (85.40%), Postives = 285/322 (88.51%), Query Frame = 0 
Query:   46 PPVSRQIRAHRRSRALPGSLSPHRDSWCRSPMDHPTTSRQRRCRLRSSSTVKDWPLAPQRSPSSTADFVDREEQEPVTALASVGALRNGRSGETTNRLAGDTEGDAHQTHGGSNRCRRKRQRXXQQLRLQTLGDIEVGAAEALSAMEANIVEAESLGLATAIRPSTGVGAAAAPSVVDNKANVANRERRQRQQQLLQVDGVVSTDEIATGDDVDTDLPRFGGQDVSCSGPGSFSEEHSSTSTRTRPAATGELEGSQLMADQAETLLQGGHSKAVQEIFASEVPKYSEEDDDRFMRMALRLAGRARMEGEVPIGAILAETVPT 367
            PPVSRQIRAHRRSRALPGSLSPHRDS C S  DHPTTSR+RRCRLRS STV DWPL PQRS SSTADFVDREEQEPVTA+ASVGALRNGRSGET N   GDT G AHQT GGSNRCRRKR  XX  LRLQTLG+IEVGAAEAL AMEANIVEAESLGL  AIRPSTGVGAA APS+VDN+ANVANRERR+RQQQLLQVDGVVSTDEIAT DDVD DL R GG+DVSCSG GSFSEE SSTST TRP+ATG LE SQLMA+QAETLLQG H+ AVQE FASEVPKYSEEDDDRFMRMALRLAGRARMEGEVPIGAILAET  T
Sbjct:   18 PPVSRQIRAHRRSRALPGSLSPHRDSGCHSAKDHPTTSRRRRCRLRSGSTVHDWPLPPQRSQSSTADFVDREEQEPVTAVASVGALRNGRSGETMNHRGGDTAGFAHQTQGGSNRCRRKRXXXXXXLRLQTLGNIEVGAAEALVAMEANIVEAESLGLEAAIRPSTGVGAAVAPSIVDNEANVANRERRKRQQQLLQVDGVVSTDEIATRDDVDADLYRSGGKDVSCSGSGSFSEERSSTSTGTRPSATGGLEASQLMAEQAETLLQGRHTNAVQENFASEVPKYSEEDDDRFMRMALRLAGRARMEGEVPIGAILAETATT 339
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14142.3226.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6H3_ECTSI2.600e-18882.56CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A6H5L744_9PHAE1.160e-17085.40CMP/dCMP-type deaminase domain-containing protein ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 367..367
NoneNo IPR availableGENE3D3.40.140.10coord: 321..365
e-value: 1.9E-5
score: 26.3
IPR002125Cytidine and deoxycytidylate deaminase domainPROSITEPS51747CYT_DCMP_DEAMINASES_2coord: 333..367
score: 10.314

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14142contigEcto-sp13_S_contig14142:520..2913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14142.3226.1mRNA_Ecto-sp13_S_contig14142.3226.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14142 520..2919 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14142.3226.1 ID=prot_Ecto-sp13_S_contig14142.3226.1|Name=mRNA_Ecto-sp13_S_contig14142.3226.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=367bp
MTSRGLNATAGAAASARCIKIVVSIALLRDVVAWRNGACLQWLRGPPVSR
QIRAHRRSRALPGSLSPHRDSWCRSPMDHPTTSRQRRCRLRSSSTVKDWP
LAPQRSPSSTADFVDREEQEPVTALASVGALRNGRSGETTNRLAGDTEGD
AHQTHGGSNRCRRKRQRRRQQLRLQTLGDIEVGAAEALSAMEANIVEAES
LGLATAIRPSTGVGAAAAPSVVDNKANVANRERRQRQQQLLQVDGVVSTD
EIATGDDVDTDLPRFGGQDVSCSGPGSFSEEHSSTSTRTRPAATGELEGS
QLMADQAETLLQGGHSKAVQEIFASEVPKYSEEDDDRFMRMALRLAGRAR
MEGEVPIGAILAETVPT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002125CMP_dCMP_dom