mRNA_Ecto-sp13_S_contig14135.3222.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14135.3222.1 vs. uniprot
Match: D7FMQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMQ8_ECTSI) HSP 1 Score: 392 bits (1007), Expect = 1.960e-134 Identity = 189/199 (94.97%), Postives = 192/199 (96.48%), Query Frame = 1
Query: 1 QAFELSVAGCRVPQQEKQQPHLASRFGRAAKLAFFWSLGFGRFPQQKIRAAFPRLGMAATEDALFRSIEGMQKAANKPWGKFLDAGTGTHSLKWINTLNTEGFTAVTADPQFAENTRKEIGFKVKTPDEIVVGNWRDEKFLEGRMFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGRIYLVGMQPLPDHPGEPA 597
QAFELSVAGCRVPQQ++QQ H SRFGRAAKLAFFWS GFG FPQQKIRAAFPRLGMAATEDALFRSIEGMQKAANKPWGKFLDAGTGTHSLKWINTLNTEGFTAVTADPQFAENTRKEIGFKVKTPDEIVVGNWRDEKFLEGR+FDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGRIYLVGMQPLPDHPG A
Sbjct: 3 QAFELSVAGCRVPQQQQQQQHFTSRFGRAAKLAFFWSFGFGGFPQQKIRAAFPRLGMAATEDALFRSIEGMQKAANKPWGKFLDAGTGTHSLKWINTLNTEGFTAVTADPQFAENTRKEIGFKVKTPDEIVVGNWRDEKFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGRIYLVGMQPLPDHPGGAA 201
BLAST of mRNA_Ecto-sp13_S_contig14135.3222.1 vs. uniprot
Match: A0A835Z2H5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2H5_9STRA) HSP 1 Score: 192 bits (489), Expect = 5.680e-57 Identity = 84/146 (57.53%), Postives = 116/146 (79.45%), Query Frame = 1
Query: 181 EDALFRSIEGMQKAANKPWGKFLDAGTGTHSLKWINTLNTEGFTAVTADPQFAENTRKEIGF------KVKTPDEIVVGNWRDEKFLEGRMFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGRIYLVGMQPLPDHPGEPAS 600
+DALF+++ G+Q A+ KPWG+FLD+GTGTHSL+W++TL T G+TAVTAD QFA N + E+ + T I+VGNW+DE F EG ++DT+LADYL+GAIDGF+PYYQD++F+RLKRH+APGG ++++GMQP+PD PA+
Sbjct: 3 DDALFKAVTGLQTASGKPWGRFLDSGTGTHSLRWVHTLPTAGWTAVTADAQFAANMQAELQLTDAERAQASTAACIIVGNWQDESFQEGEIYDTILADYLIGAIDGFSPYYQDEIFDRLKRHLAPGGTLFIIGMQPVPDSAPHPAN 148
BLAST of mRNA_Ecto-sp13_S_contig14135.3222.1 vs. uniprot
Match: A0A7R9U2U4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2U4_9STRA) HSP 1 Score: 169 bits (427), Expect = 6.080e-47 Identity = 77/145 (53.10%), Postives = 104/145 (71.72%), Query Frame = 1
Query: 184 DALFRSIEGMQKAANKPWGKFLDAGTGTHSLKWINTLNTEGFTAVTADPQFAENTRKEIGFKVKTPDEIVVGNWRDEKFLEGRMFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGRIYLVGMQPLPDHPGEPASQSFCSL 618
DA+F SIE MQ +PWG+FLDAGTG HSL WI+T+ TE +TAVTA + A +R + ++ D +VVGNW D+ FLEG FD +LADYL+GA+DGF+PY QD +FERL+RH+A G +Y+VG++P+PD G A+ C +
Sbjct: 68 DAIFDSIERMQARIGRPWGRFLDAGTGRHSLHWISTIETEAWTAVTAAQEMAVQSRDSVRGAMREQDRVVVGNWDDDTFLEGETFDVILADYLIGAMDGFSPYKQDLIFERLQRHLAEDGILYIVGLEPIPDS-GAGAADVICEV 211
BLAST of mRNA_Ecto-sp13_S_contig14135.3222.1 vs. uniprot
Match: A0A7S1UJN4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJN4_9STRA) HSP 1 Score: 167 bits (422), Expect = 3.960e-46 Identity = 76/146 (52.05%), Postives = 107/146 (73.29%), Query Frame = 1
Query: 184 DALFRSIEGMQKAANKPWGKFLDAGTGTHSLKWI-NTLNTEGFTAVTADPQFAENTRKEIGFKVKTPDEIVVGNWRDEKFLEGRMFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGRIYLVGMQPLPDHPGEPASQSFCSL 618
DA+F IE MQ +PWG+FLDAGTG+HSL+WI +T+ +TAVTA + A+ +R + ++ D++V+GNW DE FLEG ++D +LADYL+GA+DGF+PY QD +FERLKRH+AP G IY+VG++P+PD E A+ C +
Sbjct: 73 DAIFDCIERMQMQQQRPWGRFLDAGTGSHSLQWIARNFDTDSWTAVTAAEEMAKQSRDSVKGHMREQDKVVIGNWDDETFLEGEVYDVILADYLIGAMDGFSPYTQDLIFERLKRHLAPDGVIYIVGLEPIPDT-AEGAADVICEV 217
BLAST of mRNA_Ecto-sp13_S_contig14135.3222.1 vs. uniprot
Match: A0A7S1Y0Y4_9STRA (Hypothetical protein n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0Y4_9STRA) HSP 1 Score: 167 bits (422), Expect = 7.210e-46 Identity = 76/146 (52.05%), Postives = 107/146 (73.29%), Query Frame = 1
Query: 184 DALFRSIEGMQKAANKPWGKFLDAGTGTHSLKWI-NTLNTEGFTAVTADPQFAENTRKEIGFKVKTPDEIVVGNWRDEKFLEGRMFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGRIYLVGMQPLPDHPGEPASQSFCSL 618
DA+F IE MQ +PWG+FLDAGTG+HSL+WI +T+ +TAVTA + A+ +R + ++ D++V+GNW DE FLEG ++D +LADYL+GA+DGF+PY QD +FERLKRH+AP G IY+VG++P+PD E A+ C +
Sbjct: 99 DAIFDCIERMQMQQQRPWGRFLDAGTGSHSLQWIARNFDTDSWTAVTAAEEMAKQSRDSVKGHMREQDKVVIGNWDDETFLEGEVYDVILADYLIGAMDGFSPYTQDLIFERLKRHLAPDGVIYIVGLEPIPDT-AEGAADVICEV 243
BLAST of mRNA_Ecto-sp13_S_contig14135.3222.1 vs. uniprot
Match: A0A7S3UNG8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNG8_HETAK) HSP 1 Score: 156 bits (394), Expect = 4.180e-44 Identity = 75/127 (59.06%), Postives = 95/127 (74.80%), Query Frame = 1
Query: 184 DALFRSIEGMQKAANKPWGKFLDAGTGTHSLKWINTLNTEGFTAVTADPQFAENTRKE--IGFKVKTPDEIVVGNWRDEKFLEGRMFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGRIYLV 558
D +F IE MQ + +PWG+FLDAGTG HSLKW+ L T +TA+TA AE+ +E I ++ D+IV+GNW DE L G+ FDTVLADYLVGA+DGF+PY QD++FERL+RHVAPGGR+YLV
Sbjct: 53 DCIFSDIERMQMDSGRPWGRFLDAGTGVHSLKWVAGLETGAWTALTAALPMAESLYREPRITEGLRDQDDIVIGNWDDEDLLYGQQFDTVLADYLVGAMDGFSPYKQDRIFERLRRHVAPGGRLYLV 179
BLAST of mRNA_Ecto-sp13_S_contig14135.3222.1 vs. uniprot
Match: A0A7S3GT58_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT58_9STRA) HSP 1 Score: 156 bits (394), Expect = 8.690e-43 Identity = 72/142 (50.70%), Postives = 95/142 (66.90%), Query Frame = 1
Query: 184 DALFRSIEGMQKAANKPWGKFLDAGTGTHSLKWINTLNTEGFTAVTADPQFAENTRKEIGF--KVKTPDEIVVGNWRDEKFLEGR-MFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGRIYLVGMQPLPDHPGEPAS 600
D LF++IE K WGK LDAGTG HS+KWI L G+TA+TAD KE G +++ D ++VGNW DE F EG FDT+LADYL+GA+DGF+PY QD++ +LKRH+ P GR+Y++GM P+PD P P +
Sbjct: 8 DILFKTIEKFH--GTKAWGKILDAGTGVHSIKWIQGLTNSGWTAITADTGMRNQMMKESGVAAQMRPQDSVIVGNWMDEAFCEGLGTFDTILADYLIGAVDGFSPYQQDEILVKLKRHLTPEGRLYIIGMNPIPDEPAPPGN 147
BLAST of mRNA_Ecto-sp13_S_contig14135.3222.1 vs. uniprot
Match: A0A7S0XCK0_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XCK0_9STRA) HSP 1 Score: 157 bits (396), Expect = 8.710e-43 Identity = 71/139 (51.08%), Postives = 97/139 (69.78%), Query Frame = 1
Query: 184 DALFRSIEGMQKAANKPWGKFLDAGTGTHSLKWINTLNTEGFTAVTADPQFAENTRKEIGFKVKTPDEIVVGNWRDEKFLEGR-MFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGRIYLVGMQPLPDHPGEPA 597
D LF ++E + + +PWG+FLDAGTG HSLKW+ TLNTE +TA+TAD KE K + D ++VGNW D KF E +DT+ ADYL+GA+DGF+PY QD + +RL+ HV+ GR+Y++GM P+PDH +PA
Sbjct: 3 DILFSTVE--RYHSPRPWGRFLDAGTGVHSLKWLQTLNTESWTAITADNYMRAQIEKEQDIKFRPVDRLLVGNWMDSKFCETLGEYDTIFADYLIGAVDGFSPYEQDTIIKRLRNHVSENGRLYVIGMNPIPDHALQPA 139
BLAST of mRNA_Ecto-sp13_S_contig14135.3222.1 vs. uniprot
Match: A0A7S1UJN8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJN8_9STRA) HSP 1 Score: 156 bits (395), Expect = 2.000e-42 Identity = 70/133 (52.63%), Postives = 100/133 (75.19%), Query Frame = 1
Query: 223 ANKPWGKFLDAGTGTHSLKWI-NTLNTEGFTAVTADPQFAENTRKEIGFKVKTPDEIVVGNWRDEKFLEGRMFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGRIYLVGMQPLPDHPGEPASQSFCSL 618
A +PWG+FLDAGTG+HSL+WI +T+ +TAVTA + A+ +R + ++ D++V+GNW DE FLEG ++D +LADYL+GA+DGF+PY QD +FERLKRH+AP G IY+VG++P+PD E A+ C +
Sbjct: 57 AARPWGRFLDAGTGSHSLQWIARNFDTDSWTAVTAAEEMAKQSRDSVKGHMREQDKVVIGNWDDETFLEGEVYDVILADYLIGAMDGFSPYTQDLIFERLKRHLAPDGVIYIVGLEPIPDT-AEGAADVICEV 188
BLAST of mRNA_Ecto-sp13_S_contig14135.3222.1 vs. uniprot
Match: G0TG57_MYCCP (Uncharacterized protein n=84 Tax=Bacteria TaxID=2 RepID=G0TG57_MYCCP) HSP 1 Score: 152 bits (385), Expect = 1.900e-41 Identity = 75/140 (53.57%), Postives = 98/140 (70.00%), Query Frame = 1
Query: 187 ALFRSIEGMQKAANKPWGKFLDAGTGTHSLKWINTLNTEGFTAVTADPQFAENTRKEIGFKVKTPDEIVVGNWRDEKFLEGRMFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGRIYLVGMQPLPDHPGEPASQS 606
+LFR IEG+ +PWG LDAGTG SL+WI TL TE +TAVTA A+ TR +G ++ D ++VGNW D+ L G FDT+L DYLVGAI+GFAPY+QD+VFERL+ H+A GR+YLVG++P EP ++S
Sbjct: 37 SLFRYIEGVH--GERPWGTVLDAGTGVKSLQWIQTLPTERWTAVTAARSLADKTRAALGSAMRPQDRLLVGNWVDDSLLAGETFDTILVDYLVGAIEGFAPYWQDRVFERLRPHLADHGRLYLVGLEPYVQF--EPETES 172 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14135.3222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14135.3222.1 >prot_Ecto-sp13_S_contig14135.3222.1 ID=prot_Ecto-sp13_S_contig14135.3222.1|Name=mRNA_Ecto-sp13_S_contig14135.3222.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=160bp MAATEDALFRSIEGMQKAANKPWGKFLDAGTGTHSLKWINTLNTEGFTAVback to top mRNA from alignment at Ecto-sp13_S_contig14135:662..3310+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14135.3222.1 ID=mRNA_Ecto-sp13_S_contig14135.3222.1|Name=mRNA_Ecto-sp13_S_contig14135.3222.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2649bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14135:662..3310+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14135:662..3310+ >mRNA_Ecto-sp13_S_contig14135.3222.1 ID=mRNA_Ecto-sp13_S_contig14135.3222.1|Name=mRNA_Ecto-sp13_S_contig14135.3222.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=480bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14135:662..3310+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |