mRNA_Ecto-sp13_S_contig1413.3221.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1413.3221.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE) HSP 1 Score: 770 bits (1989), Expect = 8.200e-247 Identity = 408/621 (65.70%), Postives = 480/621 (77.29%), Query Frame = 1
Query: 4198 AVAAYTAGREDLSSYATFTRCNFSDNVSENG--GAVEAGAGRLEFTYSFFEGNSADVGGAMRLGGTTIVRECSFLSNSASVRGFAVAAVNGSANISSSSFEGNELYCESGSYRKDTEKARLAARYESVCSDCPEWDECLGCSMTRGNVVPTCEAPLEHTEAKQPDVTLETLSVAEGYWRATNDSVNILACYNVDACVGGQTGAEEFCAQGYTGPY-----CAVCEPDYSASLSYTCTRCSSSRRQGFVAVTVIAALMLACVVVAIVRYLVSTQLEEERNAGCFRRRVLRYVPLQALKIIVVVWQILIQFADAAGVTYPGAYQDFVRAIDVVNFDLGSVISAGCLWSDMDFHDRLLVNTLGPLVVVGLLGITYLVAMYRSSSAAGGDAVVEKIRYRHQTVLLLVTFLIYSSVSSTVFRTFACETLDDGEEYLRADYSIQCTEAKHKNFEIYAGIMVAVYPIGIPLLYGILLFQRRDVLASASADRTKAASIVGLWEPYRPERFYYEVVECGRRIMLTGVVVFIFPNDAAQIAITMLLAFFFFMIFEMLRPYASECDMWLSRGGHMTVFLSMFYLLLQKVDVSGERGESQAIYGGLLVACHVFMVLAIVVEVVGICYSSRGKK 6039
A+AAY G E ATF+ C F DN + G GAVE +GR EF FEGNSA VGGAMRLGGT VR CSFLSNSA+ RG A+A V ANIS +SF+ NELYCE+G YR+DTE +AR+E+VC DCPE D+C +TR +V P CE PLEHT A +P +TLETL + GYWRAT++S ILACYN DAC GGQTGA+ FCA GY GP C+VCE ++ SL++TCTRCSSSRRQG +AV VIAAL+ +V I +YL+ST+++E NAGCF RR+LR VP+Q LKIIVVVWQIL QFAD A +TYP AYQDF+ AIDVVNFDLGS ++AGCLW D+DFHDRLL+ TLGPLV VG L +TY VA+ R+ +A GG + R++H + LLL+TFLIYSSVSSTVF+TFACETLDDG EYLR DY+I CT+AKHK FE+YAGIMV VYP+GIPLLY ILLFQRRDVL A AD+T A I GLWEPYRPERFYYEV+ECGRRIMLTGVV FIFPNDAAQIAITML+AFFF ++FE++ PY SE D WLSRGGH+ VFLSMF LL KVDVS E +SQ ++ G+ VA HV ++LAIVVEVVGIC +S GKK
Sbjct: 429 AIAAYVTGTELYP--ATFSGCKFFDNKASGGTGGAVETLSGRQEFISCDFEGNSAYVGGAMRLGGTVDVRNCSFLSNSATSRGLAIAVV-AFANISGASFDRNELYCEAGLYREDTE-GEPSARFETVCLDCPECDDC---HVTRSSVTPACELPLEHTTAVEPGLTLETLDIHGGYWRATSESDKILACYNTDACTGGQTGADSFCASGYMGPCEEGEDCSVCETGFAPSLAHTCTRCSSSRRQGLLAVAVIAALVAVFAIVTIFKYLLSTEVDEG-NAGCFHRRILRAVPVQTLKIIVVVWQILTQFADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLLGTLGPLVAVGFLVMTYRVAVRRNGTA-GGQTPADNTRHKHLSALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRVDYTIHCTDAKHKAFEVYAGIMVVVYPVGIPLLYAILLFQRRDVLGDARADKTVAQPIAGLWEPYRPERFYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQDVFAGVFVAGHVLLILAIVVEVVGICLAS-GKK 1039
BLAST of mRNA_Ecto-sp13_S_contig1413.3221.1 vs. uniprot
Match: A0A6H5KX12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX12_9PHAE) HSP 1 Score: 758 bits (1958), Expect = 1.560e-242 Identity = 408/691 (59.04%), Postives = 478/691 (69.18%), Query Frame = 1
Query: 4078 GGVFEENRAENGGALHFGFSVG-FNLTDVTFISNSATVSGGAVAAYTAGREDLSSYATFTRCNFSDNV-SENGGAVEAGAGRLEFTYSFFEGNSADVGGAMRLGGTTIVRECSFLSNSASVRGFAVAAVNGSANISSSSFEGNELYCESGSYRKDTEKARLAARYESVCSDCPEWDECLGCSMTRGNVVPTCEAPLEHTEAKQPDVTLETLSVAEGYWRATNDSVNILACYNVDACVGGQTGAEEFCAQGYTGPYCAVCEPDYSASLSYTCTRCSSSRRQGFVAVTVIAALMLACVVVAIVRYLVSTQLEEERNAGCFRRRVLRYVPLQALKIIVVVWQILIQ----------------------------------FADAAGVTYPGAYQDFVRAIDVVNFDLGSVISAGCLWSDMDFHDRLLVNTLGPLVVVGLLGITYLVAMYRSSSAAGGDAVVEKIRYRHQTVLLLVTFLIYSSVSSTVFRTFACETLDDGEEYLRADYSIQCTEAKHKNFEIYAGIMVAVYPIGIPLLYGILLFQRRDVLASASAD-RTKAASIVGLWEPYRPERFYYEVVECGRRIMLTGVVVFIFPNDAAQIAITMLLAFFFFMIFEMLRPYASECDMWLSRGGHMTVFLSMFYLLLQKVDVSGERGESQAIYGGLLVACHVFMVLAIVVEVVGICYSSRGKK 6039
G F NRA GGAL+ FN F +NSA + GGAVA Y +G E F C F DNV S NGGAVE AG+ +F FEGNSADVGGAMRLGG+ +V N+L C GSYR DTE+ AR+ +VC DCP WD+ G +TRG V P C APLEH+ A TLETLS+ +GYWRATN+S ILACYN DAC GGQTG+E FCA GY GPYCAVCEP +S+SL++ CTRCS SRRQG +A TVIAA+ + A+ RYL+ST+ +EE NA F RRV+R VP QALKIIVVVWQIL Q FADAA V+YPG YQDF+ AIDV+NFDLGS+++AGC+WS++DFH RLLV+TLGPL+VV L +TY +AM+RSSS A + EKIR++HQ LLL+TFL+YSSVSSTVF+TFACETLDDG EYLRADY I C +A H+ FE++AG M+ VYP+GIPLLY +LLFQRRDVLA A D + A SI GLWEPYRPERFYYEVVECGRR+MLTGVVVFIFPNDAAQIAIT+L AF FF IFEM+ PY S+ DMWLSRGGH+ VF SMF LLL+KVDVS ER ESQA++ G+LVA HV MVLAIVVEVVGICY SRG++
Sbjct: 338 GATFINNRANFGGALYLSTCENAFNFAQFVFENNSA-LDGGAVAVYQSGSETFGLPVVFFECTFLDNVASGNGGAVETLAGQQQFISCDFEGNSADVGGAMRLGGSAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDLTCAVGSYRNDTEEEGATARFGTVCFDCPPWDDSAGNDITRGTVTPECAAPLEHSSADAVGATLETLSIDKGYWRATNESDRILACYNADACSGGQTGSESFCASGYMGPYCAVCEPRHSSSLAHNCTRCSGSRRQGLLAATVIAAIAAVLAIAAVSRYLLSTEHDEEGNAEWFHRRVVRAVPFQALKIIVVVWQILTQHRPKQKALEIVSGTYSSQPNQTYIFRATSLIPAQFADAANVSYPGVYQDFLSAIDVINFDLGSLLAAGCVWSEIDFHHRLLVSTLGPLIVVAFLAMTYRIAMHRSSSRADHHSAAEKIRHKHQAALLLLTFLVYSSVSSTVFQTFACETLDDGVEYLRADYRINCKDAAHEAFEVFAGFMIFVYPVGIPLLYAVLLFQRRDVLADAGDDDKATAKSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITLLSAFCFFAIFEMVSPYKSDSDMWLSRGGHVIVFFSMFDLLLRKVDVSDEREESQAVFAGVLVAGHVLMVLAIVVEVVGICYGSRGER 1027
BLAST of mRNA_Ecto-sp13_S_contig1413.3221.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI) HSP 1 Score: 747 bits (1928), Expect = 1.020e-230 Identity = 390/617 (63.21%), Postives = 460/617 (74.55%), Query Frame = 1
Query: 4192 GGAVAAYTAGREDLSSYATFTRCNFSDNVSEN-GGAVEAGAGRLEFTYSFFEGNSADVGGAMRLGGTTIVRECSFLSNSASVRGFAVAAVNGSANISSSSFEGNELYCESGSYRKDTEKARLAARYESVCSDCPEWDECLGCSMTRGNVVPTCEAPLEHTEAKQPDVTLETLSVAEGYWRATNDSVNILACYNVDACVGGQTGAEEFCAQGYTGPYCAVCEPDYSASLSYTCTRCSSSRRQGFVAVTVIAALMLACVVVAIVRYLVSTQLEEERNAGCFRRRVLRYVPLQALKIIVVVWQILIQFADAAGVTYPGAYQDFVRAIDVVNFDLGSVISAGCLWSDMDFHDRLLVNTLGPLVVVGLLGITYLVAMYRSSSAAGGDAVVEKIRYRHQTVLLLVTFLIYSSVSSTVFRTFACETLDDGEEYLRADYSIQCTEAKHKNFEIYAGIMVAVYPIGIPLLYGILLFQRRDVLASASADRTKAASIVGLWEPYRPERFYYEVVECGRRIMLTGVVVFIFPNDAAQIAITMLLAFFFFMIFEMLRPYASECDMWLSRGGHMTVFLSMFYLLLQKVDVSGERGESQAIYGGLLVACHVFMVLAIVVEVVGICYSSRGKK 6039
GGAV Y +D S T + CNFSDNV+E GGAV+ AG FEGNSADVGGAMRLGG AV V SA+I S+F GN+L C G +R DTE+ AR+E+VC DCP WDEC C + G + PTCE PLEHT A + +TLETL + EGYWRAT +SV ILACYN DAC GG+TGA+ FCA GY GPYCAVCE DYS+SL++TC CSSSRR+G + IA ++ A+ +Y++ST+ EE GCFRRRVL VP+++LKIIVVVWQIL QFADAA VT+PG YQDF+ AIDV+NFD+GSV++AGCLWSDMDFHDRLLVNT+GPLVV G L +TY + + R S++A +EKI ++HQT LL +TF++YSSVSSTVF+TFACETLDD EYLRADY I CT+AKHK F++YA IM+ VYP+GIPLLY +LLFQRR VLA A AD+T A SI GLWEPYRPERFYYEVVECGRR+MLTGVVVFIFPNDAAQIAITML+ FF ++FE+L PY SE DMWLSRGGH+ VFLSMF LLL KVDVSGE SQAI+ + VA HV M+L IVVEVVGICY+S GKK
Sbjct: 1014 GGAVYMYAGELQDEPS--TISGCNFSDNVAEEAGGAVKTLAGFQNIFSCHFEGNSADVGGAMRLGGEATXXXXXXXXXXXXXXXLAVDVVE-SASIHDSTFNGNQLSCGKGWFRSDTEQEDPNARFETVCVDCPAWDECFECIIADGTITPTCEVPLEHTSADEDGLTLETLKLDEGYWRATTESVIILACYNADACAGGKTGADSFCASGYQGPYCAVCETDYSSSLAHTCKHCSSSRRRGLTVIAAIAVIVTVLAFAAVFQYMLSTE-HEEGIFGCFRRRVLGAVPVESLKIIVVVWQILTQFADAANVTFPGLYQDFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVNTIGPLVVAGFLAMTYGIVIRRHSASADTGG-LEKIYHKHQTALLFLTFVVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFKVYAAIMIVVYPVGIPLLYALLLFQRRHVLADAGADKTVALSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLITSFFSLLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDVSGESNHSQAIFSRVFVAGHVLMILVIVVEVVGICYAS-GKK 1624
BLAST of mRNA_Ecto-sp13_S_contig1413.3221.1 vs. uniprot
Match: A0A6H5LAD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAD4_9PHAE) HSP 1 Score: 704 bits (1816), Expect = 3.560e-226 Identity = 379/648 (58.49%), Postives = 462/648 (71.30%), Query Frame = 1
Query: 4147 NLTDVTFISNSATVSGGAVAAYTAGREDLSSYATFTRCNFSDNVSEN-GGAVE--------------AGAGRLEFTYSFFEGNSA--DVGGAMRLGGTTIVRECSFLSNSASVRGFAVAAVNGSANISSSSFEGNELYCESGSYRKDTEKARLAARYESVCSDCPEWDECLGCSMTRGNVVPTCEAPLEHTEAKQPDVTLETLSVAEGYWRATNDSVNILACYNVDACVGGQTGAEEFCAQGYTGPYCAVCEPDYSASLSYTCTRCSSSRRQGFVAVTVIAALMLACVVVAIVRYLVSTQLEEERNAGCFRRRVLRYVPLQALKIIVVVWQILIQFADAAGVTYPGAYQDFVRAIDVVNFDLGSVISAGCLWSDMDFHDRLLVNTLGPLVVVGLLGITYLVAMYRSSSAAGGDAVVEKIRYRHQTVLLLVTFLIYSSVSSTVFRTFACETLDDGEEYLRADYSIQCTEAKHKNFEIYAGIMVAVYPIGIPLLYGILLFQRRDVLASASADRTKAASIVGLWEPYRPERFYYEVVECGRRIMLTGVVVFIFPNDAAQIAITMLLAFFFFMIFEMLRPYASECDMWLSRGGHMTVFLSMFYLLLQKVDVSGERGESQAIYGGLLVACHVFMVLAIVVEVVGICYSSRGKK 6039
++TD FI+N A +GGAV Y +D AT + CNFS+NV+E GGAV A L Y+ SA DVGGAMR GG V +C FL N A RG AV V S NI++S + ++ + ++D R+E+VC +CP WDEC C++ G V PTCE PLEHT A + +TLETL + EGYWRAT +SV ILA YN +AC GG+TGA+ FCA GY G YCAVC+ DYS SL++ CT CSSSRRQG + + IA ++ VAI +Y++ST+ EE CFRRRVL VP+Q+LKIIVVVWQIL QFAD A VTYPG YQDF+ AIDV+NFD+GSV++ GCLW ++DFHDRLLVNT+GPLVV G L +TY + + R SA+GG VEKIR++HQT LL +TFL+YSSVSSTVF+TFACETLDD EYLRADY I CT+AKHK FE+YA IM+ VYP+GIPL Y LLFQ +LA A AD+T A SI GLWEPYRPERFYYE VECGRR+ LTGVVVFIFPNDAAQIAITML+ +F ++FE+L PY SE DMWLSRGGH+ VFLS+F L+L KVDVSGE +SQA++ G+L+A HV M+L IVVEVVGICY+S K+
Sbjct: 78 DVTDAVFINNRAG-NGGAVYIYAGEFQDRP--ATISGCNFSNNVAEEAGGAVNTLAVSNFSLLVILRATRQLLIAPYTTGRHQSALPDVGGAMRPGGDATVSDCEFLDNIAYSRGLAVDVVE-SGNINNSRWSQSQSTFSALKMQEDPN-----VRFETVCLECPAWDECFECTIADGTVTPTCEVPLEHTAADEDGLTLETLKIDEGYWRATTESVIILASYNANACAGGKTGADSFCASGYQGTYCAVCKTDYSPSLAHICTHCSSSRRQGLMCIAAIAVIVTVLAFVAIFQYMLSTE-HEEGILWCFRRRVLGAVPVQSLKIIVVVWQILTQFADTANVTYPGLYQDFLSAIDVINFDIGSVLAVGCLWYEVDFHDRLLVNTIGPLVVAGFLAMTYGIVL-RRYSASGGTGGVEKIRHKHQTALLFLTFLVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFEVYAAIMIVVYPVGIPLFYAFLLFQHHHILADAGADKTVALSISGLWEPYRPERFYYEEVECGRRVNLTGVVVFIFPNDAAQIAITMLITSYFSLLFEILSPYGSESDMWLSRGGHVIVFLSIFDLVLLKVDVSGESDQSQAVFSGVLLAGHVLMILVIVVEVVGICYASGMKR 714
BLAST of mRNA_Ecto-sp13_S_contig1413.3221.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE) HSP 1 Score: 680 bits (1754), Expect = 8.760e-212 Identity = 360/662 (54.38%), Postives = 465/662 (70.24%), Query Frame = 1
Query: 4084 VFEENRA--ENGGALHFGFSVGFNLTDVTFISNSATVSGGAVAAYTAGREDLSSY--ATFTRCNFSDNVS-ENGGAVEAGAGRLEFTYSFFEGNSADVGGAMRLGGTTIVRECSFLSNSASVRGFAVAAVNGSANISSSSFEGNELYCESGSYRKDTEKARL-AARYESVCSDCPEWDECLGCSMTRGNVVPTCEAPLEHTEAKQPDVTLETLSVAEGYWRATNDSVNILACYNVDACVGGQTGAEEFCAQGYTGPYCAVCEPDYSASLSYTCTRCSSSRRQGFVAVTVIAALMLACVVVAIVRYLVSTQLEEERNAGCFRRRVLRYVPLQALKIIVVVWQILIQFADAAGVTYPGAYQDFVRAIDVVNFDLGSVISAGCLWSDM--DFHDRLLVNTLGPLVVVGLLGITYLVAMYRSSSAAGGD-AVVEKIRYRHQTVLLLVTFLIYSSVSSTVFRTFACETLDDGEEYLRADYSIQCTEAKHKNFEIYAGIMVAVYPIGIPLLYGILLFQRRDVLASASADRTKAASIVGLWEPYRPERFYYEVVECGRRIMLTGVVVFIFPNDAAQIAITMLLAFFFFMIFEMLRPYASECDMWLSRGGHMTVFLSMFYLLLQKVDVSGERGESQAIYGGLLVACHVFMVLAIVVEVVGICYSSRGKKP 6042
F N A GG + G VTF NSA V GGAVA Y G D + A+F C F N + E GG VE+ G+ F S F+ N ADVGGA++LGG T V C+F++NSAS RG A+AAV G NIS + FEGN +C++G + ++ E+ + RY++VC DCPE EC CS+ PTC L++T +++ V+LETLS++ GYWRA+N S+ ILACYN +AC+GGQTG + C GY GPYCAVCE Y++SL++TCT+CSSSRR GFV IA + +L+S ++ E+ C RR+ +PLQ+ KII+VVWQIL QFA AA +++P YQDF+ A+DVVNFDLGS++++GC W+D+ DFHDRLLV+TLGPL+VVG L TY VA R+SSA+GG A VE IR++H + LLVTFL+YSSVS+TVF+ FAC+ LDDG YLRADY I CT AKH+ ++YA M+A+YP+GIPLLY LL RRDVL +AD+ A S LWEPYRPERFYYEV+ECGRR++LTGVVVFI+PN AAQ+A+T+L+AFFF M++EML PY S+ DMWLSRGGH+ VFLSMF +LL KVDVS ER ESQ ++ G++VA H M LA++VE VG+CY+S +P
Sbjct: 485 TFTNNSAFGNGGGVFSSANTAGQYFEGVTFQYNSAAV-GGAVATYGTGNGDEVTPVPASFVGCRFMSNAATETGGGVESAFGQENFVSSHFQDNYADVGGALQLGGKTNVDGCAFVANSASSRGLAIAAV-GFVNISDTLFEGNTFFCQAGEFVENKEQEEGDSGRYDTVCFDCPERSECYSCSVQEAAGRPTCSVALDNTVSEEAGVSLETLSMSRGYWRASNSSLIILACYNPEACLGGQTGVDNSCDNGYQGPYCAVCESGYASSLAHTCTQCSSSRRNGFVVAAAIAVVXXXXXXXXXCAHLISGEVSEQ---SCLHRRLSAMLPLQSFKIIIVVWQILTQFASAANISFPDVYQDFINALDVVNFDLGSLVASGC-WADINVDFHDRLLVSTLGPLLVVGGLASTYAVAQRRNSSASGGSQAGVEAIRHKHLSAFLLVTFLVYSSVSATVFQMFACDKLDDGHTYLRADYRILCTSAKHEALQVYAAFMIALYPVGIPLLYAYLLHHRRDVLMDPTADKASAQSTADLWEPYRPERFYYEVIECGRRVLLTGVVVFIYPNTAAQVAVTILIAFFFLMVYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDVSDERTESQRVFAGVIVAGHCLMFLAVIVEAVGVCYASSKGQP 1140
BLAST of mRNA_Ecto-sp13_S_contig1413.3221.1 vs. uniprot
Match: A0A6H5L4F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4F7_9PHAE) HSP 1 Score: 633 bits (1633), Expect = 2.660e-197 Identity = 365/654 (55.81%), Postives = 430/654 (65.75%), Query Frame = 1
Query: 4135 SVGFNLTDVTFISNSATVSGGAVAAYTAGREDLSSYATFTRCNFSDNV-SENGGAVEAGAGRLEFTYSFFEGNSADVGGAMRLGGTTIVRECSFLSNSASVRGFAVAAVNGSANISSSSFEGNELYCESGSYRKDTEKARLAARYESVCSDCPEWDECLGCSMTRGNVVPTCEAPLEHTEAKQPDVTLETLSVAEGYWRATN--------DSVNILACYNVDACVGGQTGAEEF------CAQGYTGPY----CAVCEPDYSASLSYTCTRCSSSRRQGFVAVTVIAALMLACVVVAIVRYLVSTQLEEERNAGCFRRRVLRYVPLQALKIIVVVWQILIQFADAAGVTYPGAYQDFVRAIDVVNFDLGSVISAGCLWSDMDFHDRLLVNTLGPLVVVGLLGITYLVAMYRSSSAAGGDAVVEKIRYRHQTVLLLVTFLIYSSVSSTVFRTFACETLDDGEEYLRADYSIQCTEAKHKNFEIYAGIMVAVYPIGIPLLYGILLFQRRDVLASASADRTKAASIVGLWEPYRPERFYYEVVECGRRIMLTGVVVFIFPNDAAQIAITMLLAFFFFMIFEMLRPYASECDMWLSRGGHMTVFLSMFYLLLQKVDVSGERGESQAIYGGLLVACHVFMVLAIVVEVVGICYSSRGKK 6039
+ G + T TF SNSA +GGAVAAY AG + ++ TF+RC FS +V S GGAV G E S RG A+A V SA IS SSF NELYC +G YR D EK AR+E VC + +W+EC GC + R + P CEAPLEHT A VT ETL V G+WRAT + + L C + +G F C P CAVCE DYS SL++TCTRCSSSRRQG VA T IAAL+ V ++L+ST++EE N G FRRRVLR VP+QALKI+VVVWQIL QFAD A VTYP YQDF+ AID+VNFDLGSV+ AGCLWSD+D H RLLV+ +GPL+VVG L +T VA+ R+ SA+G A +EKIR++HQT LLLVTFL+YSSVSS VF TFACETLDD EYLRAD I T+AKHK FE+YAGIMV VYP+ IPLLY LLFQ RDVL AD+T A I GLWE Y PERFYYE CGRRI+LTG VVFIFPN A+QIAITML+AFFFF +F++L PY S D WLSRGGH+ VFLSMF LL KVDVSG+R +SQA + G+LVA HV M+LAIVVEV +CY+SR K+
Sbjct: 310 ATGLSFTSTTFQSNSAG-NGGAVAAYDAGSDWIAM--TFSRCTFSHDVASGTGGAVGVLLGYQELD---------------------------------SWRGLAIAVV-ASATISGSSFSKNELYCAAGFYRHDAEKQESNARFEKVCLE-RDWNECDGCFIERSDDTPVCEAPLEHTSADTDGVTFETLKVDGGFWRATQYGCLYRGANGLGKLLCLRIHGTIGHTLATVSFLPSCSLCRSVVFVPVPLTDCAVCETDYSPSLAHTCTRCSSSRRQGLVAATAIAALVAVFAVATFFKFLLSTEVEEGGNIGRFRRRVLRAVPVQALKIVVVVWQILTQFADVANVTYPSVYQDFLGAIDLVNFDLGSVLVAGCLWSDIDVHGRLLVSNIGPLIVVGFLTMTDRVAVRRNRSASGASAALEKIRHKHQTALLLVTFLLYSSVSSMVFSTFACETLDDDIEYLRADDRIHYTDAKHKAFEVYAGIMVFVYPVDIPLLYAALLFQHRDVLTRVGADKTLAQPIAGLWEAYSPERFYYE---CGRRILLTGGVVFIFPNTASQIAITMLIAFFFFAVFDVLSPYTSASDTWLSRGGHVIVFLSMFDFLLLKVDVSGDRDQSQAAFAGVLVAGHVLMILAIVVEVAALCYASRRKR 922
BLAST of mRNA_Ecto-sp13_S_contig1413.3221.1 vs. uniprot
Match: D7G1E0_ECTSI (EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E0_ECTSI) HSP 1 Score: 578 bits (1489), Expect = 1.240e-172 Identity = 292/428 (68.22%), Postives = 345/428 (80.61%), Query Frame = 1
Query: 4756 ACYNVDACVGGQTGAEEFCAQGYTGPYCAVCEPDYSASLSYTCTRCSSSRRQGFVAVTVIAALMLACVVVAIVRYLVSTQLEEERNAGCFRRRVLRYVPLQALKIIVVVWQILIQFADAAGVTYPGAYQDFVRAIDVVNFDLGSVISAGCLWSDMDFHDRLLVNTLGPLVVVGLLGITYLVAMYRSSSAAGGDAVVEKIRYRHQTVLLLVTFLIYSSVSSTVFRTFACETLDDGEEYLRADYSIQCTEAKHKNFEIYAGIMVAVYPIGIPLLYGILLFQRRDVLASASADRTKAASIVGLWEPYRPERFYYEVVECGRRIMLTGVVVFIFPNDAAQIAITMLLAFFFFMIFEMLRPYASECDMWLSRGGHMTVFLSMFYLLLQKVDVSGERGESQAIYGGLLVACHVFMVLAIVVEVVGICYSSRGKK 6039
AC+ GG+TGA+ FCA GY GPYCAVC+ DYS SL++TCT CSSSRR+G + IA ++ +VAI +Y++ST+ E+ GCFRR VL VP+++LKIIVVVWQIL QFADAA VTYPG YQDF+ AIDV+NFD+GSV++AGCLWSDMDFHDRLLV T+GPLVVVG L +TY + + R SA+G VEKI ++HQT LLL+TFL+YSSVSSTVF+TFACE LDD EYLRADY I CT+AKH+ F++YA IM+ VYP+GIPLLY LLFQRR VLA A AD+T A SI GLWEPYRPERFYYEVVECGRR+MLTGVVVFIFPNDAAQIAITMLL FF +FE+L PY SE DMWLSRGGH+ VFLSMF LLL KVDVS E +SQA++ G+LVA HV M+L I+VEVVG+CY+S GKK
Sbjct: 875 ACHFKGNSAGGKTGADNFCASGYQGPYCAVCKTDYSPSLAHTCTHCSSSRRRGLTVIAAIAVIVTVFAIVAIFQYMLSTE-HEDGILGCFRRMVLGAVPVESLKIIVVVWQILTQFADAANVTYPGVYQDFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVTTIGPLVVVGFLAMTYGIVL-RRHSASGDTGGVEKIYHKHQTALLLLTFLVYSSVSSTVFQTFACEILDDDVEYLRADYRIHCTDAKHQAFKVYAAIMIVVYPVGIPLLYAALLFQRRHVLADAGADKTVALSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLLTLFFSSLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDVSCESDQSQAVFSGVLVAGHVLMILVIIVEVVGMCYAS-GKK 1299
BLAST of mRNA_Ecto-sp13_S_contig1413.3221.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 553 bits (1426), Expect = 8.920e-161 Identity = 310/660 (46.97%), Postives = 427/660 (64.70%), Query Frame = 1
Query: 4084 VFEENRAENGGALHF-GFSVGFNLTDVTFISNSATVSGGAVAAYTAGRE-----DLSSYATFTRCNFSDN-VSENGGAVEAGAGRLEFTYSFFEGNSADVGGAMRLGGTTIVRECSFLSNSASVRGFAVAAVNGSANISSSSFEGNELYCESGSYRKDTEKARLAARYESVCSDCPEWDECLGCSMTRGNVVPTCEAPLEHTEAKQPDVTLETLSVAEGYWRATNDSVNILACYNVDACVGGQTGAEEFCAQGYTGPYCAVCEPDYSASLSYTCTRCSSSRRQGFVAVTVIAALMLACVVVAIVRYLVSTQLEEERNAGCFRRRVLRYVPLQALKIIVVVWQILIQFADAAGVTYPGAYQDFVRAIDVVNFDLGSVISAGCLWSDMDFHDRLLVNTLGPLVVVGLLGITYLVAMYRSSSAAGGDAVVEKIRYRHQTVLLLVTFLIYSSVSSTVFRTFACETLDDGEEYLRADYSIQCTEAKHKNFEIYAGIMVAVYPIGIPLLYGILLFQRRDVLASASADRTKAAS----IVGLWEPYRPERFYYEVVECGRRIMLTGVVVFIFPNDAAQIAITMLLAFFFFMIFEMLRPYASECDMWLSRGGHMTVFLSMFYLLLQKVDVSGERGESQAIYGGLLVACHVFMVLAIVVEVVGICYSSR 6030
+FE N A GGA+ G +G + F +N A GGAV + ++G E D + C F DN S GGA+E AG S FE N+A VGGA+RLGG+ I+ C+F+ N+A G AV+ + +S F GN L CE+G Y + RY++VC CP + S+ G+ VP C L+HT ++ D T+ETL ++ GYWRATNDS N+LACYN DACVGG T FC +GY GPYC+VC YS SL++TCT C G +A+ V+ + + +A+ +LVS ++E R RV++ +PLQ++KI+VVVWQIL QF+ A VTYP YQ F+ ++++NFD+ + SAGCL ++DFH RLLV T+GPLV + LL ITY VA RSS G +A ++KIR++H +++LL+TFL+YSSVS+TVF++FACE LDD ++YLRADY I+C ++H+ F+++AGIM+ VYP+GIPL YG LL++ R VL S A + + + I LW PY+P RFYYEV+EC RR+ LTGVVVFI+PN AAQ+A+T+++AF F + +L PY S+ D +S GH+ VF SM+ LL KVDVS ER +SQ ++ G+LVA H MV+A+VVE + I YS R
Sbjct: 1111 IFESNTAGAGGAVMLSGVVIGPEFIQINFTANRAP-RGGAVYSVSSGIETNGGGDPLFPVGYKDCLFRDNEASVTGGAIETAAGYDFAINSVFEANAAGVGGALRLGGSAILTNCTFIDNTAEDEGPAVSNLGVLDLEGTSRFSGNVLSCENGMYLDSVD----GDRYQTVCDGCPVNNSDWIVSVENGDRVPICVVQLDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDH--GGIAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVI--HRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCL-VEVDFHGRLLVATIGPLVALALLAITYTVAKRRSS---GSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYSWR 1757
BLAST of mRNA_Ecto-sp13_S_contig1413.3221.1 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI) HSP 1 Score: 531 bits (1369), Expect = 1.860e-159 Identity = 270/414 (65.22%), Postives = 326/414 (78.74%), Query Frame = 1
Query: 4795 GAEEFCAQGYTGPY--CAVCEPDYSASLSYTCTRCSSSRRQGFVAVTVIAALMLACVVVAIVRYLVSTQLEEERNAGCFRRRVLRYVPLQALKIIVVVWQILIQFADAAGVTYPGAYQDFVRAIDVVNFDLGSVISAGCLWSDMDFHDRLLVNTLGPLVVVGLLGITYLVAMYRSSSAAGGDAVVEKIRYRHQTVLLLVTFLIYSSVSSTVFRTFACETLDDGEEYLRADYSIQCTEAKHKNFEIYAGIMVAVYPIGIPLLYGILLFQRRDVLASASADRTKAASIVGLWEPYRPERFYYEVVECGRRIMLTGVVVFIFPNDAAQIAITMLLAFFFFMIFEMLRPYASECDMWLSRGGHMTVFLSMFYLLLQKVDVSGERGESQAIYGGLLVACHVFMVLAIVVEVVGICYSSR 6030
G+E+F + + G CAVC YS SL++TCTRCS SRRQG + TV AAL+ C VA RYL+ST+ EE RN GCF R+ + +PLQ+ KII+VVWQIL QFA AA VTYP YQDF+ AIDV+N DLGS+ISAGCLWS +DFHDRLLV+T+ PL+ +G+L TYLVA+ R+++A G A++E IR++H TVLL VTFL+YSSVSS VF+TFAC++LDDG YLRADY I CT +KH ++YAG+MV VYP+GIPLLY ILLFQ RD+LA+ASAD+ A I LWE Y+PERFYYEV+ECGRRIMLTGVVVFI+PNDAAQIAIT+L+A FFF +F++L PY SE DMWLSRGG + VFLSMF LLL KVDVS ER +SQ Y G+LVA HV M LAI EVVGICY+SR
Sbjct: 608 GSEQFTSSLFKGNSADCAVCGDGYSPSLAHTCTRCSRSRRQGLMVATVFAALIAVCATVATFRYLLSTEFEE-RNIGCFHRKTFQAIPLQSFKIIIVVWQILTQFAAAANVTYPRVYQDFLSAIDVINVDLGSMISAGCLWSGIDFHDRLLVSTIAPLLAIGMLASTYLVALRRNATA--GHAIIEIIRHKHVTVLLFVTFLVYSSVSSMVFQTFACDSLDDGNNYLRADYRILCTTSKHLALQVYAGVMVVVYPVGIPLLYAILLFQHRDILANASADKAGAQPIASLWEAYKPERFYYEVIECGRRIMLTGVVVFIYPNDAAQIAITILIAVFFFAVFDILSPYTSEFDMWLSRGGQVVVFLSMFDLLLLKVDVSHERSQSQQAYAGVLVAGHVLMFLAISAEVVGICYASR 1018
BLAST of mRNA_Ecto-sp13_S_contig1413.3221.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 526 bits (1355), Expect = 1.480e-157 Identity = 305/673 (45.32%), Postives = 419/673 (62.26%), Query Frame = 1
Query: 4084 VFEENRAENGGALHF--GFSVGFNLTDVTFISNSATVSGGAVAAYTAGR----EDLS-SYATFTRCNFSDNVS-ENGGAVEAGAGRLEFTYSFFEGNSADVGGAMRLGGTTIVRECSFLSN-SASVRGFAVAAVNGSANISSSSFEGNELYCESGSYRKDTEKARLAARYESVCSDCPEWDECLGCSMTRGNVVPTCEAPLEHTEAKQPDVTLETLSVAEGYWRATNDSVNILACYNVDACVGGQTGAEEFCAQGYTGPYCAVCEPDYSASLSYTCTRCSSSRRQGFVAVTVIAALMLACVVVAIVRYLVSTQLEEERNAGCFRRRVLRYVPLQALKIIVVVWQILIQFADAAGVTYPGAYQDFVRAIDVVNFDLGSVISAGCLWSDMDFHDRLLVNTLGPLVVVGLLGITYLVAMY----RSSSAAGGDAVVEKIRYRHQTVLLLVTFLIYSSVSSTVFRTFACETLDDGEEYLRADYSIQCTEAKHKNFEIYAGIMVAVYPIGIPLLYGILLFQRRDVLASASADRTKAASIV---GLWEPYRPERFYYEVVECGRRIMLTGVVVFIFPNDAAQIAITMLLAFFFFMIFEMLRPYASECDMWLSRGGHMTVFLSMFYLLLQKVDVSGERGESQAIYGGLLVACHVFMV----LAIVVEVVGICYSSRGKKP 6042
VF N A G F G +VG +++ +SNSA V GGA++ +G ED + + TF +C F+ N + GGAV+ AG+ +F S FEGN+A GGA+RL GT V CSF+ N S G AV+ + +++S+ SF N C+ G + + E L YE++C CP EC GCS +VP C LEH+ + VTL+ L + GYWRAT S N+L CYN DAC+GG TG+E +C +GY GPYCAVC Y+A L C++CS R G +A+ V ++ VA+V Y VS E E A R R+VPLQ++KI++V WQIL QF A + +P YQ F+ A+++ NFDLG V+SAGC++ D+DFHDRLLV+T+ P+V G+ +L A+Y R+S + D ++++ ++H +++LL+TFL+Y+SVS+ +F+TFACE LDD + YLRADY I+C KH F++YAG M+ +Y +GIP LYG LF+ DVL ADR + A I LW+PYRP FYYEV+EC RR++L GVVVFI+PN AAQIA+ +L+A F MI E L PYAS D WL R GH V +SM+ LL KVDVS ER SQ ++ LLVA HV MV L +++E + + RG++P
Sbjct: 312 VFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQV-GGAISLIGSGTSFNPEDYTPAPTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTL---YEAICDGCPV--ECEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSD--RAGSIALGVSVSVAGLLFTVALVSYAVSG--ESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVF-DVDFHDRLLVSTIAPIV-----GLLFLAAVYAAAARNSHRSSED--LQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQQP 966 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1413.3221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1413.3221.1 >prot_Ecto-sp13_S_contig1413.3221.1 ID=prot_Ecto-sp13_S_contig1413.3221.1|Name=mRNA_Ecto-sp13_S_contig1413.3221.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1350bp MGPLRMAHMLSLTFVSLLAIFARAQDLQECSAVTSPYTVGSTEDASTLSNback to top mRNA from alignment at Ecto-sp13_S_contig1413:6671..14703- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1413.3221.1 ID=mRNA_Ecto-sp13_S_contig1413.3221.1|Name=mRNA_Ecto-sp13_S_contig1413.3221.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8033bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1413:6671..14703- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1413:6671..14703- >mRNA_Ecto-sp13_S_contig1413.3221.1 ID=mRNA_Ecto-sp13_S_contig1413.3221.1|Name=mRNA_Ecto-sp13_S_contig1413.3221.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=4050bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1413:6671..14703- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |