mRNA_Ecto-sp13_S_contig14111.3212.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14111.3212.1 vs. uniprot
Match: D7FU92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU92_ECTSI) HSP 1 Score: 979 bits (2531), Expect = 0.000e+0 Identity = 539/608 (88.65%), Postives = 551/608 (90.62%), Query Frame = 1
Query: 28 MGFNIAFTTIAEENGLTETEKGLTLSSYYFGFTVSQVPGGYMAKRCGGKATLGLCFLFWFPLSAALASSIRSGYAAPVVVGCRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIVSRFGAHTAFYVAAVMGAAWLAVWVCLGSDAPHMRREGEKFNTKALRPREGLGVTAGEEPDVDGTTRAGSEDGLPRPGAGDGSCWVAAGLGKGDPGAWSFQNPAAGPPSVCRNPALLRSSNHDPGSSAERGXXXXGVCLDRVERTPTDADAAAGRVVDPEAIPPDGGDDTPVGDVCGGRGTARGHKSTVVCDLLVSKSVTPSWDESKQAPVVCDGRTEGAPSAAXXXXXXXXXXXXREAIGGGXXXXXXXXXXXXXXXXXXXXS---RAASLAAVEGVCKPSSSGRGGLAAAKTTVVKGFERNAVPFPWRAMAACPAAWAFVAGNVGAGMGINVVMSWLPTYYEEFVLVDLEDIHIAELLSPYLTMMAFSVLGGVCYSWLVNGRGLPRTRSSKLVAGAAFSLSVAVFPCMGLPRSCAAATVVSSLALASAALSRGGWSTNHMDIAAPQHAAMLYSVANSISAAASVLGISLTG 1842
MGFNIAFTTIAEENGLTETEKGLTLSSYYFGFTVSQVPGGYMAKRCGGKATLGLCFL WFPLSAALASSIRSGYAAPVVVGCRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIVSRFGAHTAFYVAAVMGAAWLAVW+CLGSDAPH RREGEKFNTKALRPREG+GVTAGE+ DVDGTTRAGSEDGLPRP AGDGSCWVAAGLG+G PG WSFQNPAAG PSVCR+PALLRSSNH G SAERG GVCLD VER PT+ADAAAGRVVDPE IPP GGDDTPVGD CGG G A GHKSTVVC LLV+KS SWDESK+ VVCDGRTEGAP A R AI XXXXXXXXXXXXXXXXXXXX AASLAA+EGVC+PSSSGRGG AAAKTTVVK FER A PFPWRAMAACPAAWAFVAGNVGAGMGINVVMSWLPTYYEEFVLVDLEDIHIAELLSPYLTMMAFSVLGGV YSWLVNGRGLPR RSSKLVAGAAFSLSVAVFPCMGLPRSCAAATVVSSLALASAALSRGGWSTNHM+IAAP+HAAMLYSVANSISAAASVLGISLTG
Sbjct: 1 MGFNIAFTTIAEENGLTETEKGLTLSSYYFGFTVSQVPGGYMAKRCGGKATLGLCFLLWFPLSAALASSIRSGYAAPVVVGCRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIVSRFGAHTAFYVAAVMGAAWLAVWICLGSDAPHSRREGEKFNTKALRPREGVGVTAGEDTDVDGTTRAGSEDGLPRPDAGDGSCWVAAGLGEGGPGDWSFQNPAAGSPSVCRDPALLRSSNHGSGCSAERGGGGGGVCLDCVERAPTEADAAAGRVVDPEPIPPGGGDDTPVGDACGGGGPACGHKSTVVCGLLVAKSAALSWDESKKVAVVCDGRTEGAPPA-DAASATSTDSDTRAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXHAASLAALEGVCEPSSSGRGGRAAAKTTVVKAFERTAAPFPWRAMAACPAAWAFVAGNVGAGMGINVVMSWLPTYYEEFVLVDLEDIHIAELLSPYLTMMAFSVLGGVSYSWLVNGRGLPRARSSKLVAGAAFSLSVAVFPCMGLPRSCAAATVVSSLALASAALSRGGWSTNHMEIAAPEHAAMLYSVANSISAAASVLGISLTG 607
BLAST of mRNA_Ecto-sp13_S_contig14111.3212.1 vs. uniprot
Match: A0A6H5JPQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ5_9PHAE) HSP 1 Score: 879 bits (2270), Expect = 6.050e-315 Identity = 505/609 (82.92%), Postives = 514/609 (84.40%), Query Frame = 1
Query: 133 QVPGGYMAKRCGGKATLGLCFLFWFPLSAALASSIRSGYAAPVVVGCRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPI---------------------------------------VSRFGAHTAFYVAAVMGAAWLAVWVCLGSDAPHMRREGEKFNTKALRPREGLGVTAGEEPDVDGTTRAGSEDGLPRPGAGDGSCWVAAGLGKGDPGAWSFQNPAAGPPSVCRNPALLRSSNHDPGSSAERGXXXXGVCLDRVERTPTDADAAAGRVVDPEAIPPDGGDDTPVGDVCGGRGTARGHKSTVVCDLLVSKSVTPSWDESKQAPVVCDGRTEGAPSAAXXXXXXXXXXXXREAIGGGXXXXXXXXXXXXXXXXXXXXSRAASLAAVEGVCKPSSSGRGGLAAAKTTVVKGFERNAVPFPWRAMAACPAAWAFVAGNVGAGMGINVVMSWLPTYYEEFVLVDLEDIHIAELLSPYLTMMAFSVLGGVCYSWLVNGRGLPRTRSSKLVAGAAFSLSVAVFPCMGLPRSCAAATVVSSLALASAALSRGGWSTNHMDIAAPQHAAMLYSVANSISAAASVLGISLTG 1842
+VPGGYMAKR GGKATLGLCFLFWFPLSAALASSIRSGYAAPVVVGCRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPI VSR GAHTAFYVAAVMGAAWLAVWVCLGSD PH RREGEKFNTKALRPREG+GVTAGEEPDVDG TRAGSEDG PRP AGDGSCWVAAGLGKG PGAWSFQNPAAG PSVCR+PALLRSSNHD G SA+R GVCLD VER PTDADAAAGRVVDPEAIPP GG TPVGDVCGG G A GHKSTVVC LLV+KS T S DESK+APVVCDG TEGA SA XXXXXXXXXXXX XXXXXXXXXXXXXX LAAVE VCKPSSSGRGG AAAKT V+KGFERNA PFPWRAMAACPAAWAFVAGNVGAGMGINVVMSWLPTYYEEF+LVDLEDIHIAELLSPYLTMMAFSVLGGV YSWLVNGRGLPR RSSKLVAGAAFSLSVAV PCMGLPRSCAAATVVSSLALASAALSRGGWSTNHM+IAAPQHAAMLYSVANSISAAASVLGISLTG
Sbjct: 13 KVPGGYMAKRYGGKATLGLCFLFWFPLSAALASSIRSGYAAPVVVGCRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIGATCIVGDNMADRGRAKASTYIATKDDAFSLLCSPVGLSVSRLGAHTAFYVAAVMGAAWLAVWVCLGSDTPHTRREGEKFNTKALRPREGVGVTAGEEPDVDGATRAGSEDGKPRPEAGDGSCWVAAGLGKGGPGAWSFQNPAAGSPSVCRDPALLRSSNHDSGCSAQRAGGGRGVCLDCVERAPTDADAAAGRVVDPEAIPPGGGGHTPVGDVCGGAGPACGHKSTVVCGLLVAKSATSSLDESKKAPVVCDGWTEGALSAXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXLAAVEDVCKPSSSGRGGRAAAKTIVMKGFERNAAPFPWRAMAACPAAWAFVAGNVGAGMGINVVMSWLPTYYEEFMLVDLEDIHIAELLSPYLTMMAFSVLGGVSYSWLVNGRGLPRARSSKLVAGAAFSLSVAVLPCMGLPRSCAAATVVSSLALASAALSRGGWSTNHMEIAAPQHAAMLYSVANSISAAASVLGISLTG 612
BLAST of mRNA_Ecto-sp13_S_contig14111.3212.1 vs. uniprot
Match: D8U1X0_VOLCA (MFS domain-containing protein n=3 Tax=Volvox TaxID=3066 RepID=D8U1X0_VOLCA) HSP 1 Score: 144 bits (363), Expect = 6.610e-34 Identity = 72/174 (41.38%), Postives = 110/174 (63.22%), Query Frame = 1
Query: 10 TSVFERMGFNIAFTTIAEENGLTETEKGLTLSSYYFGFTVSQVPGGYMAKRCGGKATLGLCFLFWFPLSAALASSIRSGYAAPVVVGCRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIVSRFGAHTAFYVAAVMGAAWLAVWVCLGSDAPH 531
T+ ER+GF+IAFT +A+E G+ ET KG LS++Y+G+ +SQ+PGG+ A++ GG+ L LCF W SAA + + A ++ R+ +G+AQG +PA +VL WIP R R + SGM+ G+A AM+ +P + + FGA + V +G AW+A+W+ +G D PH
Sbjct: 20 TAYVERVGFSIAFTDLAKEAGIDETVKGTVLSAFYWGYALSQIPGGWAAQQYGGRLMLLLCFACW---SAASIFTPTNARHASAIILARVAVGVAQGFLIPAVHTVLSQWIPPHERARAVSLTTSGMYLGSASAMLVLPWLATLFGAASLLKVVGGLGIAWMALWLLVGRDIPH 190
BLAST of mRNA_Ecto-sp13_S_contig14111.3212.1 vs. uniprot
Match: A0A2K3DEV9_CHLRE (MFS domain-containing protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DEV9_CHLRE) HSP 1 Score: 143 bits (361), Expect = 1.340e-33 Identity = 69/174 (39.66%), Postives = 108/174 (62.07%), Query Frame = 1
Query: 10 TSVFERMGFNIAFTTIAEENGLTETEKGLTLSSYYFGFTVSQVPGGYMAKRCGGKATLGLCFLFWFPLSAALASSIRSGYAAPVVVGCRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIVSRFGAHTAFYVAAVMGAAWLAVWVCLGSDAPH 531
T+ ER+GF+IAFT +A+E G+ E+ KG LS++Y+G+ +SQ+PGG+ A++ GG+ L LCF W S ++ R YA +V R+ +G+AQG +PA +VL WIP R R + SGM+ G+A AM+ +P +R G+ + + +G AW+ +W+ +G D PH
Sbjct: 27 TAYVERVGFSIAFTDLAKEAGVDESVKGAVLSAFYWGYALSQIPGGWAAQQYGGRIMLLLCFASWSAASILTPTNARHTYA---IVAARVAVGVAQGFLIPAVHTVLSQWIPPHERARAVSLTTSGMYLGSASAMLVLPYFSARLGSASLLKIVGGLGLAWMCLWLAVGRDIPH 197
BLAST of mRNA_Ecto-sp13_S_contig14111.3212.1 vs. uniprot
Match: A0A2J8A4N2_9CHLO (Putative anion transporter 7 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A4N2_9CHLO) HSP 1 Score: 140 bits (354), Expect = 1.250e-32 Identity = 73/194 (37.63%), Postives = 112/194 (57.73%), Query Frame = 1
Query: 10 TSVFERMGFNIAFTTIAEENGLTETEKGLTLSSYYFGFTVSQVPGGYMAKRCGGKATLGLCFLFWFPLSAALASSIRSGYAAPVVVGCRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIVSRFGAHTAFYVAAVMGAAWLAVWVCLGSDAPHMRREGEKFNTKALRPREGLG 591
T+ ER+GF+IAFT +A+E G+ E KG LS++Y+G+ +SQ+PGG+ A++ GG+ L LCF W +S ++ R A +V R+ +G+AQG +PA +VL WIP R R + SGM+ G+A AM+ +P + S FG+ + + +G AW+ +W+ +G D PH RP G G
Sbjct: 28 TAYVERVGFSIAFTDLAKEAGIDEAVKGKVLSAFYWGYALSQIPGGWAAQQYGGRIMLLLCFASWSAVSILTPTNARHTAA---IVAARVCVGVAQGFLIPAVHTVLSQWIPPHERARAVSLTTSGMYLGSASAMLILPWLASIFGSASLLRIVGGLGLAWMVLWLAVGRDIPHRETVIPLSTMDHHRPNPGSG 218
BLAST of mRNA_Ecto-sp13_S_contig14111.3212.1 vs. uniprot
Match: A0A835XG38_9CHLO (MFS domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XG38_9CHLO) HSP 1 Score: 139 bits (350), Expect = 4.310e-32 Identity = 70/174 (40.23%), Postives = 105/174 (60.34%), Query Frame = 1
Query: 10 TSVFERMGFNIAFTTIAEENGLTETEKGLTLSSYYFGFTVSQVPGGYMAKRCGGKATLGLCFLFWFPLSAALASSIRSGYAAPVVVGCRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIVSRFGAHTAFYVAAVMGAAWLAVWVCLGSDAPH 531
T+ ER+GF+IAFT +A+ +G+ E+ KG LS++Y+G+ +SQ+PGG+ A+R GG+ L LCF W +S + R +A + C +G+AQG +PA +VL WIP R R + SGM+ G+A AM+ +P R GA + V +G AWL +W+ +G D PH
Sbjct: 27 TAYVERVGFSIAFTDLAKVSGIDESVKGTVLSAFYWGYALSQIPGGWAAQRYGGRIMLILCFASWSLISILTPTDARHTFAISMARVC---VGIAQGFLIPAVHTVLSQWIPPHERARAVSLTTSGMYLGSASAMLVLPWFSDRLGAASLLKVVGGLGIAWLVLWLIVGRDIPH 197
BLAST of mRNA_Ecto-sp13_S_contig14111.3212.1 vs. uniprot
Match: A0A150G433_GONPE (MFS domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G433_GONPE) HSP 1 Score: 138 bits (347), Expect = 1.010e-31 Identity = 70/174 (40.23%), Postives = 108/174 (62.07%), Query Frame = 1
Query: 10 TSVFERMGFNIAFTTIAEENGLTETEKGLTLSSYYFGFTVSQVPGGYMAKRCGGKATLGLCFLFWFPLSAALASSIRSGYAAPVVVGCRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIVSRFGAHTAFYVAAVMGAAWLAVWVCLGSDAPH 531
T+ ER+GF+IAFT +A+E G+ E+ KG LS++Y+G+ +SQ+PGG+ A++ GG+ L LCF W +S ++ R A ++ R+ IG+AQG +PA +VL WIP R R + SGM+ G+A AM+ +P + S G+ + V +G AWL +W+ +G D PH
Sbjct: 28 TAYVERVGFSIAFTDLAKEAGIDESVKGTVLSAFYWGYALSQIPGGWAAQQYGGRIMLLLCFASWSLVSILTPTNARHTLA---IIFARVCIGVAQGFLIPAVHTVLSQWIPPHERARAVSLTTSGMYLGSASAMLVLPWVASITGSASLLTVVGGLGLAWLVLWLLVGRDIPH 198
BLAST of mRNA_Ecto-sp13_S_contig14111.3212.1 vs. uniprot
Match: A0A7R9YRI1_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YRI1_9CHLO) HSP 1 Score: 135 bits (341), Expect = 5.930e-31 Identity = 69/170 (40.59%), Postives = 104/170 (61.18%), Query Frame = 1
Query: 22 ERMGFNIAFTTIAEENGLTETEKGLTLSSYYFGFTVSQVPGGYMAKRCGGKATLGLCFLFWFPLSAALASSIRSGYAAPVVVGCRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIVSRFGAHTAFYVAAVMGAAWLAVWVCLGSDAPH 531
ER+GF+IAFT +A+ L E+ KG LS++++G+ +SQVPGG A+R GG+ L L F W +S + R + V+V R+ IG+AQG +P+ +VL WIP R + + A SGM+ G+A AM +P + + FGA + V +G AWLA+W+ +G + PH
Sbjct: 24 ERVGFSIAFTELAKSAELDESMKGTVLSAFFWGYALSQVPGGAAAQRYGGRVMLLLSFALWSTVSVVTPTDARHAW---VIVFARVAIGVAQGFLIPSVHTVLSQWIPPHERAKAVSLATSGMYLGSAAAMWVLPSVAATFGASSLLLVDGGVGYAWLAMWMAVGREIPH 190
BLAST of mRNA_Ecto-sp13_S_contig14111.3212.1 vs. uniprot
Match: W1PRD4_AMBTC (MFS domain-containing protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PRD4_AMBTC) HSP 1 Score: 135 bits (340), Expect = 9.600e-31 Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 1
Query: 1 CPVTSVFERMGFNIAFTTIAEENGLTETEKGLTLSSYYFGFTVSQVPGGYMAKRCGGKATLGLCFLFWFPLSAALASSIRSGYAAPVVVGCRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIVSRFGAHTAFYVAAVMGAAWLAVWVCLGSDAPHMRREGEKFNTKALRP 576
C ER+GF++A+T +A+ G+ ++ KGL LS++++G+ +SQVPGG++A++ GG+ L L FL W L+AAL + ++VG RL +G+AQG P+ +VL W+P + R + MSGM+ GAA M+ VP +V +G + F AV+GA W +W SD P + T + P
Sbjct: 21 CANICYIERVGFSVAYTKVADAAGVDQSTKGLILSTFFYGYALSQVPGGWVAQQLGGRRVLLLSFLMW-TLTAALVPLDPD--SPKILVGARLLVGIAQGFIFPSIHTVLAQWVPPHEKSRSVSLTMSGMYLGAAAGMLVVPTLVQLWGPQSVFLSEAVLGAIWSFLWFKYASDPPRSDHHLKAGPTDTMLP 209
BLAST of mRNA_Ecto-sp13_S_contig14111.3212.1 vs. uniprot
Match: A0A383VFJ7_TETOB (MFS domain-containing protein n=3 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VFJ7_TETOB) HSP 1 Score: 134 bits (337), Expect = 2.070e-30 Identity = 74/179 (41.34%), Postives = 110/179 (61.45%), Query Frame = 1
Query: 7 VTSVFERMGFNIAFTTIAEENGLTETEKGLTLSSYYFGFTVSQVPGGYMAKRCGGKATLGLCFLFWFPLSAALASSIRSGYAAPVV--VGCRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIVSRFGAHTAFYVAAVMGAAWLAVWVCLGSDAPHMR 537
+T+ ER+GF+IAFT +A+E L E KG LS++Y+G+ VSQ+PGG+ A+ GG+ TL FL W +LA + G A+ V V R+ +GLAQG +P+ +VL WIP R R + SGM+ G+A AM+ +P + + FGA + + ++G AWL +W+ +G DAP R
Sbjct: 16 LTAYVERVGFSIAFTAMAKEANLDEHVKGNVLSAFYWGYGVSQIPGGWAAQLYGGRRTLIASFLAW-----SLACLLTPGNASSVTLTVLARVCVGLAQGGLIPSVHTVLSKWIPPHERARAVSLTTSGMYLGSAAAMLVLPSVSALFGAASLLRLVGLLGLAWLVLWLAVGRDAPGRR 189 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14111.3212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14111.3212.1 >prot_Ecto-sp13_S_contig14111.3212.1 ID=prot_Ecto-sp13_S_contig14111.3212.1|Name=mRNA_Ecto-sp13_S_contig14111.3212.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=605bp MGFNIAFTTIAEENGLTETEKGLTLSSYYFGFTVSQVPGGYMAKRCGGKAback to top mRNA from alignment at Ecto-sp13_S_contig14111:3..4338- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14111.3212.1 ID=mRNA_Ecto-sp13_S_contig14111.3212.1|Name=mRNA_Ecto-sp13_S_contig14111.3212.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4336bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14111:3..4338- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14111:3..4338- >mRNA_Ecto-sp13_S_contig14111.3212.1 ID=mRNA_Ecto-sp13_S_contig14111.3212.1|Name=mRNA_Ecto-sp13_S_contig14111.3212.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1815bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14111:3..4338- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |