prot_Ecto-sp13_S_contig14108.3208.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14108.3208.1
Unique Nameprot_Ecto-sp13_S_contig14108.3208.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length278
Homology
BLAST of mRNA_Ecto-sp13_S_contig14108.3208.1 vs. uniprot
Match: A0A6H5KP96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP96_9PHAE)

HSP 1 Score: 509 bits (1310), Expect = 7.040e-169
Identity = 272/278 (97.84%), Postives = 272/278 (97.84%), Query Frame = 0
Query:    1 LTADKPTGGXXXXXXXXXXXXXXXXXGVKWAVTELLDVSDFDALVPRPAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHHLLAGNELHPIMDNLGKFESNGYNAAAAMLMSKEDKKAAAGRGG 278
            L ADKPTG   XXXXXXXXXXXXXX GVKWAVTELLDVSDFDALVPRPAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHHLLAGNELHPIMDN GKFESNGYNAAAAMLMSKEDKKAAAGRGG
Sbjct:  386 LAADKPTG---XXXXXXXXXXXXXXGGVKWAVTELLDVSDFDALVPRPAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHHLLAGNELHPIMDNFGKFESNGYNAAAAMLMSKEDKKAAAGRGG 660          
BLAST of mRNA_Ecto-sp13_S_contig14108.3208.1 vs. uniprot
Match: D7FJL2_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL2_ECTSI)

HSP 1 Score: 507 bits (1306), Expect = 3.850e-165
Identity = 273/278 (98.20%), Postives = 274/278 (98.56%), Query Frame = 0
Query:    1 LTADKPTGGXXXXXXXXXXXXXXXXXGVKWAVTELLDVSDFDALVPRPAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHHLLAGNELHPIMDNLGKFESNGYNAAAAMLMSKEDKKAAAGRGG 278
            L ADKPTG XXXXXXXXXXXXXXXXX VKWAVTELLDVSDFDALVPRPAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEH+LLAGNELHPIMDN GKFESNGYNAAAAMLMSKEDKKAAAGRGG
Sbjct:  538 LAADKPTGXXXXXXXXXXXXXXXXXXXVKWAVTELLDVSDFDALVPRPAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHNLLAGNELHPIMDNFGKFESNGYNAAAAMLMSKEDKKAAAGRGG 815          
BLAST of mRNA_Ecto-sp13_S_contig14108.3208.1 vs. uniprot
Match: A0A835YZN6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN6_9STRA)

HSP 1 Score: 375 bits (962), Expect = 3.760e-129
Identity = 183/217 (84.33%), Postives = 197/217 (90.78%), Query Frame = 0
Query:   30 WAVTELLDVSDFDALVPRPAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGD-VGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHHLLAGNELHPI 245
            WAVT  LDVSDF +LVP PA  +PF LD FQKQAVARLER ECVFV+AHTSAGKTVVAEYAIA+A  HMTRAIYTSPIKALSNQKYRDFK RFGD VGLITGDVSINPEASCLIMTTEILRSMLYRGAD++RDIEWVIFDEVHY+ND+ERGVVWEEVIIMLPEHA MIFLSATTPNT+EF DWIGRTK+KPVHVITT YRPVPL+H + AG E+H +
Sbjct:   16 WAVTASLDVSDFRSLVPNPAIEYPFELDAFQKQAVARLERRECVFVAAHTSAGKTVVAEYAIALAAAHMTRAIYTSPIKALSNQKYRDFKKRFGDDVGLITGDVSINPEASCLIMTTEILRSMLYRGADIVRDIEWVIFDEVHYINDTERGVVWEEVIIMLPEHAGMIFLSATTPNTIEFSDWIGRTKKKPVHVITTDYRPVPLQHFIYAGGEMHKV 232          
BLAST of mRNA_Ecto-sp13_S_contig14108.3208.1 vs. uniprot
Match: A0A7S1XU58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU58_9STRA)

HSP 1 Score: 353 bits (905), Expect = 6.250e-120
Identity = 171/244 (70.08%), Postives = 203/244 (83.20%), Query Frame = 0
Query:   30 WAVTELLDVSDFDALVPRPAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFG--DVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHHLLAGNELHPIMDNLGKFESNGYNAAAAMLMSKEDKK 271
            WAVT LLDVSDF+ LVPRPA  +PF LDGFQKQAV RLE+ E VFV+AHTSAGKTVVAEYA+A+A ++ TR +YTSPIKALSNQK+RDFK RFG  +VG++TGDVS+NPEA C+IMTTEILRSMLYRGADL+RD+EWV+FDEVHYVNDSERGVVWEEVIIMLP +  M+FLSATTPNT EFC+WIGRTKR+PVHV+ T++RPVPL HHL    +   ++D   +F   G   AAA +  KE ++
Sbjct:   14 WAVTALLDVSDFERLVPRPAAEWPFELDGFQKQAVCRLEQKEDVFVAAHTSAGKTVVAEYAVALALRNGTRCVYTSPIKALSNQKFRDFKERFGAENVGIVTGDVSVNPEAPCVIMTTEILRSMLYRGADLVRDLEWVVFDEVHYVNDSERGVVWEEVIIMLPSYVGMVFLSATTPNTTEFCEWIGRTKRRPVHVVATSHRPVPLVHHLTLKGKDFVVLDAERRFIQAGAEQAAAKIREKEQRR 257          
BLAST of mRNA_Ecto-sp13_S_contig14108.3208.1 vs. uniprot
Match: A0A1V9ZLM2_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLM2_9STRA)

HSP 1 Score: 367 bits (943), Expect = 1.210e-114
Identity = 183/253 (72.33%), Postives = 211/253 (83.40%), Query Frame = 0
Query:   28 VKWAVTELLDVSDFDALVPRPAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFG--DVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHHLLAGNELHPIMDNLGKFESNGYNAAAAMLMSKEDKKAAAGRGG 278
            ++WA  E +DVS+F A VP  A +FPF LD FQKQAV  LE  +CVF++AHTSAGKTVVAEYAIAM+Q+HMTR IYTSPIKALSNQKYRDF+T+FG  +VGLITGDVSINP+ASCL+MTTEILRSMLYRGAD+IRDIEWVIFDE+HY+NDSERGVVWEEVIIMLPEH +M+FLSATTPNT EF DWIGRTK+K +HVI+T  RP+PL HHL AG E+ P+MD  G+F S  Y+AA   L  K D K   GRGG
Sbjct:  370 LEWASAEPVDVSNFHAKVPDMAMQFPFELDSFQKQAVVHLENHDCVFIAAHTSAGKTVVAEYAIAMSQKHMTRTIYTSPIKALSNQKYRDFRTKFGVDNVGLITGDVSINPQASCLVMTTEILRSMLYRGADVIRDIEWVIFDEIHYLNDSERGVVWEEVIIMLPEHVSMVFLSATTPNTFEFSDWIGRTKQKKIHVISTHKRPIPLSHHLYAGGEVLPVMDPQGQFLSANYSAAVQRLKPK-DSKTGPGRGG 621          
BLAST of mRNA_Ecto-sp13_S_contig14108.3208.1 vs. uniprot
Match: A0A6G0WTP8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTP8_9STRA)

HSP 1 Score: 363 bits (932), Expect = 3.770e-113
Identity = 181/253 (71.54%), Postives = 209/253 (82.61%), Query Frame = 0
Query:   28 VKWAVTELLDVSDFDALVPRPAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFG--DVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHHLLAGNELHPIMDNLGKFESNGYNAAAAMLMSKEDKKAAAGRGG 278
            ++WA    +DVSDF   +P  A +FPF LD FQKQA+  LE  ECVF++AHTSAGKTVVAEYAIAM+Q+HMTR +YTSPIKALSNQKYRDF+T+FG  +VGLITGDVSINPEASCL+MTTEILRSMLYRGAD+IRDIEWVIFDE+HY+NDSERGVVWEEVIIMLPEH +M+FLSATTPNT EF DWIGRTK+K +HVI+TT RPVPL HHL AG E+ PI+DN  +F +N +  A      KE K AA  RGG
Sbjct:  361 LEWASKAEVDVSDFHTKIPDMALKFPFELDSFQKQAIVHLENHECVFIAAHTSAGKTVVAEYAIAMSQKHMTRTVYTSPIKALSNQKYRDFRTKFGVDNVGLITGDVSINPEASCLVMTTEILRSMLYRGADVIRDIEWVIFDEIHYLNDSERGVVWEEVIIMLPEHVSMVFLSATTPNTFEFSDWIGRTKQKKIHVISTTKRPVPLGHHLYAGGEIIPIVDNSNQFLTNNHAKANQKCKPKETKTAAT-RGG 612          
BLAST of mRNA_Ecto-sp13_S_contig14108.3208.1 vs. uniprot
Match: K0TLR1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLR1_THAOC)

HSP 1 Score: 363 bits (932), Expect = 1.390e-112
Identity = 180/248 (72.58%), Postives = 207/248 (83.47%), Query Frame = 0
Query:   30 WAVTE---LLDVSDFDALVPRPAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGD-VGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHHLLAGNELHPIMDNLGKFESNGYNAAAAMLMSKEDKKAA 273
            WAVT+   L   +DF  ++P PA  FPF LD FQKQAV RLER+ECVF++AHTSAGKTV AEYAIA+A +H TRAIYTSPIKALSNQKYRDFK++FGD VGLITGD+ I  + SCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHY+NDSERGVVWEEVIIMLPE+ N+IFLSATTPNT+EF +WIGRTKRKPVHVI T YRPVPL H+L AG +LH I++  G F++ GY AAA  L+    ++AA
Sbjct:  383 WAVTDYIPLTSTNDFHTMLPNPALTFPFELDDFQKQAVLRLERSECVFLAAHTSAGKTVSAEYAIALAMKHCTRAIYTSPIKALSNQKYRDFKSKFGDDVGLITGDMQIGADGSCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYINDSERGVVWEEVIIMLPEYVNLIFLSATTPNTIEFSEWIGRTKRKPVHVIRTNYRPVPLSHNLWAGGKLHKILEGKGAFDTKGYTAAAHALLPASAREAA 630          
BLAST of mRNA_Ecto-sp13_S_contig14108.3208.1 vs. uniprot
Match: A0A7S4JTK5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JTK5_9STRA)

HSP 1 Score: 355 bits (910), Expect = 1.340e-111
Identity = 179/252 (71.03%), Postives = 202/252 (80.16%), Query Frame = 0
Query:   30 WAVTELLDVSDFDALVPRPAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGD-VGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHHLLAGNELHPIMDNLGKFESNGYNAAAAMLM--SKEDKKAAAGRGG 278
            W  T    +  F  L P PA  +PF LD FQKQAVARLER ECVFV+AHTSAGKTV AEYAIA+A++H TRAIYTSPIKALSNQKYRDF+ +FGD VGLITGD+ I  ++SCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHY+NDSERGVVWEEVIIMLP++ N+IFLSATTPNT+EF DWIGRTKRKPVHVI T YRPVPL HHL AG +LH +M+    F   GY  A   L+  S +D+ AA G+ G
Sbjct:    3 WPATPPPPIRAFPPLAPDPAISYPFELDDFQKQAVARLERGECVFVAAHTSAGKTVCAEYAIALARKHCTRAIYTSPIKALSNQKYRDFRDKFGDDVGLITGDLQIGADSSCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYINDSERGVVWEEVIIMLPDYVNLIFLSATTPNTIEFSDWIGRTKRKPVHVIRTDYRPVPLSHHLYAGQKLHKVMEGKSGFLEKGYKDATMALLPQSLKDQTAAGGKKG 254          
BLAST of mRNA_Ecto-sp13_S_contig14108.3208.1 vs. uniprot
Match: B8BS27_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS27_THAPS)

HSP 1 Score: 352 bits (903), Expect = 1.540e-111
Identity = 174/240 (72.50%), Postives = 198/240 (82.50%), Query Frame = 0
Query:   40 DFDALVPRPAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGD-VGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHHLLAGNELHPIMDNLGKFESNGYNAAAAMLMSKEDKKAAAGRGG 278
            DF  L+P PA  FPF LD FQKQA+ RLER+ECVF++AHTSAGKTV AEYAIA+A +H TRAIYTSPIKALSNQKYRDF+ +FGD VGLITGD+ I  + SCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHY+NDSERGVVWEEVIIMLP++ N+IFLSATTPNT+EF +WIGRTKRKPVHVI T YRPVPL H+L AG +LH +M+    F   GY+ AA  LM    + AA  +GG
Sbjct:    1 DFHTLLPNPALTFPFELDDFQKQAILRLERSECVFLAAHTSAGKTVCAEYAIALAMKHCTRAIYTSPIKALSNQKYRDFRNKFGDDVGLITGDMQIGADGSCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYINDSERGVVWEEVIIMLPDYVNLIFLSATTPNTIEFSEWIGRTKRKPVHVIRTNYRPVPLSHNLWAGMKLHKLMEGREGFNPKGYSEAAKALMPASARAAADAKGG 240          
BLAST of mRNA_Ecto-sp13_S_contig14108.3208.1 vs. uniprot
Match: A0A7S2KL30_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KL30_9STRA)

HSP 1 Score: 360 bits (924), Expect = 2.710e-111
Identity = 175/240 (72.92%), Postives = 204/240 (85.00%), Query Frame = 0
Query:   30 WAVTE---LLDVSDFDALVPRPAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFG-DVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHHLLAGNELHPIMDNLGKFESNGYNAAAAMLM 265
            WAVT+   L + +DF  L P PA  FPF LD FQKQA+ RLE+ +CVF++AHTSAGKTV AEYA+A+A++H TRAIYTSPIKALSNQKYRDF+++FG DVGLITGD+ I  + SCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHY+NDSERGVVWEEVIIMLPE+ NMIFLSATTPNT+EF +WIGRTKRKPVHVI T YRPVPL HHL AG+++H IM+    F+S GY+AA+  L+
Sbjct:  421 WAVTDYIPLTEEADFHTLCPNPALTFPFELDDFQKQAILRLEKRQCVFLAAHTSAGKTVCAEYAVALAKRHCTRAIYTSPIKALSNQKYRDFRSKFGEDVGLITGDMQIGADGSCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYINDSERGVVWEEVIIMLPEYVNMIFLSATTPNTIEFSEWIGRTKRKPVHVIRTNYRPVPLSHHLWAGHKMHKIMEGKQGFDSKGYSAASKALL 660          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14108.3208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KP96_9PHAE7.040e-16997.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJL2_ECTSI3.850e-16598.20DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835YZN6_9STRA3.760e-12984.33P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S1XU58_9STRA6.250e-12070.08Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A1V9ZLM2_9STRA1.210e-11472.33DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna... [more]
A0A6G0WTP8_9STRA3.770e-11371.54Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
K0TLR1_THAOC1.390e-11272.58Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S4JTK5_9STRA1.340e-11171.03Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
B8BS27_THAPS1.540e-11172.50Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S2KL30_9STRA2.710e-11172.92Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 52..235
e-value: 8.1E-29
score: 111.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 64..220
score: 21.745
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 60..206
e-value: 4.3E-18
score: 65.7
NoneNo IPR availableGENE3D3.40.50.300coord: 34..228
e-value: 1.5E-75
score: 254.8
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 37..263
NoneNo IPR availablePANTHERPTHR12131:SF8HELICASE SKI2Wcoord: 37..263
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 43..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14108contigEcto-sp13_S_contig14108:687..3930 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14108.3208.1mRNA_Ecto-sp13_S_contig14108.3208.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14108 687..3931 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14108.3208.1 ID=prot_Ecto-sp13_S_contig14108.3208.1|Name=mRNA_Ecto-sp13_S_contig14108.3208.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=278bp
LTADKPTGGGGGSAAKNGGGRGRGGGGVKWAVTELLDVSDFDALVPRPAH
RFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTR
AIYTSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRS
MLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSA
TTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHHLLAGNELHPIMDNLG
KFESNGYNAAAAMLMSKEDKKAAAGRGG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase