prot_Ecto-sp13_S_contig141.3202.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig141.3202.1
Unique Nameprot_Ecto-sp13_S_contig141.3202.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1706
Homology
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BLAST of mRNA_Ecto-sp13_S_contig141.3202.1 vs. uniprot
Match: D8LET6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET6_ECTSI)

HSP 1 Score: 2797 bits (7251), Expect = 0.000e+0
Identity = 1507/1676 (89.92%), Postives = 1549/1676 (92.42%), Query Frame = 0 
Query:   50 MAFRRVRRRYIDTRKNSNIKSIIEELLEAIKGNGMTIRTWFEIMDQLSNNNMINQSEFSKGMEMLQNHSTERMKQPVLSAEQIQELFVYMDANHDGILVLNEVALACKVEHFKTTSSQEMDAITSMMQALDDYMGVHYMKIRDLFVHLDRDKSDGLSRAEIRCGFHAIQAEAKRKQEAAVRRKQKEAVKKAIREDEARIAEAKREEMDRLVYKQRRLSMAGEAAWIPAPLMSQHDPWVTEENGLSYKAARGRAPAQALIVYFRSYKPDDGPVYGVIMHPREFLGNVNMRVTLLFKYNDDKYAGLARILHPTGGAFEAAHASSAASVSKPELRYIETDSEWRDVIGRQFASKSEARLHHVSKWIRDQLATLSAAEGKEARISASAVEGSLGEVMEFVNNPDNLWAVTRDMLETIVSHIRAPRSDSDEAPVLAATILWKLSEYEDFVLPLLGADAAGKCAAAIEELGPPRAGPLQYWLQVSVQTRVTGVLCRIGCATSVDGPVRLRVASALIAVVARPRGPLEARKDYREGADGKMLSFASFALGNLVATSTSIRGSIAHRSSLFDALVSALRPATGGAGGARGGKSVGGVLGGSPLQAVACAAFCLAHVTTGESAPLLTRGKILSACLTLSGLLDVCVNQVEAGVGDSGSDRGATDGSASEVLPITALNGDAAAAAAGRGERGSLSVTMVMESAGKALWGCLSHLSDSTNGDDSTSRSIRDSSSCEGSVGSPDRTELSSGGISGGASVDSGCQAPDLKGKEQGALSATGIPSGNAEGGFSVCGGDDSITDRPSMSPCDILSKCALTLLGLLSQTAKHHAYRRSSVGVESTGNDPNCKRISSSGRTGSASSNDVSRNIDLSETTGKSNSNGGNSSIGGVPHSIVAIAGSCLSRVAQDIDLAAGPPGAMESVLALLLPSAGLLVREQAALTLSAIAGQGFQTLSDFRMEKPAVATAARWSCGGGGNYSERNGGSDDAARWPGPGEGGRERKRLLLWGRFCAGVVEGTGAQIILDCALPGPSARPNSRLLRERAALAFSLVCLCAGLRPASSVVQGGIVSLLRCRDGEVVGGAASAALWALCRVPVNRKAFAKARVVSCLMPLSEWSREKGY---------SSVHTYCLAAL-----YLLSQ--EPKNALQITNHGAGIAKLVSWATPMNGDHDCEDLLLMITVEDNAKTASCLGVIRSRCLMLPEGMKALADGLASYSLIQLVLQLLRVGVWVKSVLPLTLREAQGVLFAVQDRAEYRGYCESICGGDPFGVEDTLALQLQRPGVKYAALAGDAVVGLASLSVTLASRRRLAVNGTVESVGRLLARSMATERGGGREKGSKGDREAVRNMAKLLKNLSSVPEAHRRLSNRPLLPLITRLWEESPDEATSQLACHVLANLSRSDVPGVRNRLFQLHLAAESEVVRRTRASGGAGTSPAPIAKQKPSATVPRQGFASSSTATGAQQGDTNIRDDDTVSLSSSVFRRDGFVEGHCFKGNGCTSDAKSAAVLLSQEAIRRDARRDAQYRLRLMPAALWGSRARHVDDGCNG-EDGLDVAGIVEKQRTRQTLLIDGFDEASGAVPVESAT--STLNAKHDRHQAKRDGSCPSKQKIGGATAVVMQSSVGDSDDGGGDGIVFQGTANVSQAASLKRPAVTANVPLRWQSRVVALSSLRDSLTGGA 1706
            MAFRRVRRRYID RKNSNIKSI+EELL AI+GNGMTIRTWFEIMDQLSNNNMINQSEFSKGMEMLQNHSTERMKQPVLSAEQIQELFVYMDANHDGILVLNEVALACKVEH+KTTSSQEMDAITSMMQALDDYMGVHYMKIRDLFVHLDRDKSDGLSRAEIRCGFHAIQAEAKRKQEAAV          AIREDEARIAEAKREEMDRLVYKQRRLSMAGEAAWI APL SQHDPWVTEENGL YKAARGRAPAQALIVYFRSYKPDDGPVYGVIMHPREFLGNV MRVTLLFKYNDDKYAG ARILHPTGGAFEAA+ASSAA VSKPELRYIETDSEWRDVIGRQFASKSEARLHH+SKWIRDQLATLSAAE KE R+SASAV+ SLGEVMEFVNNPDNLWAVTR+MLETIVS+IRAP+S+SDEAPVLAATILWKLSEYEDFVLPLL ADAAGKCAAAIEELGPPRAGPLQYWLQVSVQTRVTGVLCRIGCA SVDGPVRLRVASALIAVVARPRGPLEARKDYREGADGK+LSFASFALGNLVATSTSIRGSIAHRSSLFDALVSALRPATGGAGGAR G+SVGGVLGGSPLQAVACAAFCLAHVTTGESAPLLTRGKILSACLTLSGLLDVCV+Q+EAGVGDS S RGATDGSASEV PIT  N DAA AAA  GE G+LSVTMVMESAGKALWGCLSHLSDSTNGDDSTSRSIRDSSSCEGSVGSPDRTELSSGGISGGASVDSGCQAPDLKG EQGALSA GIPSGNAEGG S+CGGDDSITDRPSMSP  ILSKCALTLLGLLSQ AKHHA+RRSSVGVESTGNDPNCKR+S SGRTGS SS  VS NID SETTGKSNSNGGNSSIGGVPHSIVAIAGSCLSRVAQDIDLAAGPPGAMESVLALLLPSAGLLVR+QAALTLSAIAGQGFQTLSDFR EK AVA AARWSCG            DDAA+WPG GEGGRERKRLLLWG FCAGVVEGTGAQIILDCALPGPS+RPNSRLLRERAALAFSLVCLCAGLRPASS VQGGIVSLLRCRDGEVVGGAA+AALWALCRVPVNRKAFAK R    L+ L+  +R +             V ++C   L     Y +S   EP+NALQITNHG  IAKLVSWATP+NGDH+ EDL  MITVEDNAKTASCLGVIR RCL+LPEGMKALADGLASYSLIQLVLQLLRVGVWVKSVLPLTLREAQGVLFAVQDRAEYRGYCESICGGDPFGVEDTLALQLQRPGVKYAALAGDAVVGLASLSVTLASRRRLAVNGTVESV RLLARSMA E GGGREKGSKGD EAVRNMAKLLKNLSSVPEAHRRLSNRPLLPLITRLWEESPDEATSQLACHVLANLSRSDVPGVRNRLFQLHLAAESEVVRRTRASGGAGT+PAPIAKQKPSA VPRQGFA+SSTAT AQ G+TN RDDDTVSLSSSVFRRDGFVEGH +KGNGCTSDAKSAAVLLSQEA+RRDARRDAQYRLRLMPAALWGSRARHVDDGC+G EDGLDVAGIVEKQRTRQT L  G DEASGAV VESAT  STLNA+HDRHQAKRDGSCPSKQKIGGA AVV+Q SVGD DDGGGDGIVFQGTA VSQAASLKRPAVTANVPLRWQSRVVALSSLRDSL GGA
Sbjct:    1 MAFRRVRRRYIDARKNSNIKSIVEELLGAIEGNGMTIRTWFEIMDQLSNNNMINQSEFSKGMEMLQNHSTERMKQPVLSAEQIQELFVYMDANHDGILVLNEVALACKVEHYKTTSSQEMDAITSMMQALDDYMGVHYMKIRDLFVHLDRDKSDGLSRAEIRCGFHAIQAEAKRKQEAAVXXXXXXXXXXAIREDEARIAEAKREEMDRLVYKQRRLSMAGEAAWILAPLTSQHDPWVTEENGLLYKAARGRAPAQALIVYFRSYKPDDGPVYGVIMHPREFLGNVTMRVTLLFKYNDDKYAGPARILHPTGGAFEAANASSAAFVSKPELRYIETDSEWRDVIGRQFASKSEARLHHISKWIRDQLATLSAAEEKEPRVSASAVKESLGEVMEFVNNPDNLWAVTREMLETIVSYIRAPQSESDEAPVLAATILWKLSEYEDFVLPLLRADAAGKCAAAIEELGPPRAGPLQYWLQVSVQTRVTGVLCRIGCAASVDGPVRLRVASALIAVVARPRGPLEARKDYREGADGKILSFASFALGNLVATSTSIRGSIAHRSSLFDALVSALRPATGGAGGARXGRSVGGVLGGSPLQAVACAAFCLAHVTTGESAPLLTRGKILSACLTLSGLLDVCVDQLEAGVGDSSSARGATDGSASEVFPITVPNDDAAGAAAATGESGTLSVTMVMESAGKALWGCLSHLSDSTNGDDSTSRSIRDSSSCEGSVGSPDRTELSSGGISGGASVDSGCQAPDLKGNEQGALSAAGIPSGNAEGGVSICGGDDSITDRPSMSPRHILSKCALTLLGLLSQVAKHHAHRRSSVGVESTGNDPNCKRMSRSGRTGSTSSTKVSSNIDHSETTGKSNSNGGNSSIGGVPHSIVAIAGSCLSRVAQDIDLAAGPPGAMESVLALLLPSAGLLVRQQAALTLSAIAGQGFQTLSDFRTEKAAVAAAARWSCGXXXXXXXXXXXXDDAAQWPGQGEGGRERKRLLLWGTFCAGVVEGTGAQIILDCALPGPSSRPNSRLLRERAALAFSLVCLCAGLRPASSAVQGGIVSLLRCRDGEVVGGAATAALWALCRVPVNRKAFAKTRCFDYLL-LTSITRSRALVCCTLSENEGVVTSFCSKRLQKRQIYPISLLVEPENALQITNHGGSIAKLVSWATPLNGDHNSEDLSRMITVEDNAKTASCLGVIR-RCLLLPEGMKALADGLASYSLIQLVLQLLRVGVWVKSVLPLTLREAQGVLFAVQDRAEYRGYCESICGGDPFGVEDTLALQLQRPGVKYAALAGDAVVGLASLSVTLASRRRLAVNGTVESVDRLLARSMAIESGGGREKGSKGDHEAVRNMAKLLKNLSSVPEAHRRLSNRPLLPLITRLWEESPDEATSQLACHVLANLSRSDVPGVRNRLFQLHLAAESEVVRRTRASGGAGTTPAPIAKQKPSAAVPRQGFAASSTATRAQHGETNSRDDDTVSLSSSVFRRDGFVEGHRYKGNGCTSDAKSAAVLLSQEALRRDARRDAQYRLRLMPAALWGSRARHVDDGCSGGEDGLDVAGIVEKQRTRQTFLTAGLDEASGAVAVESATVTSTLNARHDRHQAKRDGSCPSKQKIGGAAAVVVQPSVGDFDDGGGDGIVFQGTAKVSQAASLKRPAVTANVPLRWQSRVVALSSLRDSLNGGA 1674
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig141.3202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LET6_ECTSI0.000e+089.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 234..254
NoneNo IPR availableGENE3D1.10.238.10coord: 72..246
e-value: 5.4E-10
score: 40.9
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1062..1203
e-value: 1.7E-5
score: 25.6
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1326..1461
e-value: 1.4E-5
score: 26.8
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 86..218
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 937..1442

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig141contigEcto-sp13_S_contig141:16321..36787 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig141.3202.1mRNA_Ecto-sp13_S_contig141.3202.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig141 16321..36787 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig141.3202.1 ID=prot_Ecto-sp13_S_contig141.3202.1|Name=mRNA_Ecto-sp13_S_contig141.3202.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1706bp
MLDVISFTTANVDLLVDFLDGIQVEFGSNARRDGIVCLKLSLVIEQELEM
AFRRVRRRYIDTRKNSNIKSIIEELLEAIKGNGMTIRTWFEIMDQLSNNN
MINQSEFSKGMEMLQNHSTERMKQPVLSAEQIQELFVYMDANHDGILVLN
EVALACKVEHFKTTSSQEMDAITSMMQALDDYMGVHYMKIRDLFVHLDRD
KSDGLSRAEIRCGFHAIQAEAKRKQEAAVRRKQKEAVKKAIREDEARIAE
AKREEMDRLVYKQRRLSMAGEAAWIPAPLMSQHDPWVTEENGLSYKAARG
RAPAQALIVYFRSYKPDDGPVYGVIMHPREFLGNVNMRVTLLFKYNDDKY
AGLARILHPTGGAFEAAHASSAASVSKPELRYIETDSEWRDVIGRQFASK
SEARLHHVSKWIRDQLATLSAAEGKEARISASAVEGSLGEVMEFVNNPDN
LWAVTRDMLETIVSHIRAPRSDSDEAPVLAATILWKLSEYEDFVLPLLGA
DAAGKCAAAIEELGPPRAGPLQYWLQVSVQTRVTGVLCRIGCATSVDGPV
RLRVASALIAVVARPRGPLEARKDYREGADGKMLSFASFALGNLVATSTS
IRGSIAHRSSLFDALVSALRPATGGAGGARGGKSVGGVLGGSPLQAVACA
AFCLAHVTTGESAPLLTRGKILSACLTLSGLLDVCVNQVEAGVGDSGSDR
GATDGSASEVLPITALNGDAAAAAAGRGERGSLSVTMVMESAGKALWGCL
SHLSDSTNGDDSTSRSIRDSSSCEGSVGSPDRTELSSGGISGGASVDSGC
QAPDLKGKEQGALSATGIPSGNAEGGFSVCGGDDSITDRPSMSPCDILSK
CALTLLGLLSQTAKHHAYRRSSVGVESTGNDPNCKRISSSGRTGSASSND
VSRNIDLSETTGKSNSNGGNSSIGGVPHSIVAIAGSCLSRVAQDIDLAAG
PPGAMESVLALLLPSAGLLVREQAALTLSAIAGQGFQTLSDFRMEKPAVA
TAARWSCGGGGNYSERNGGSDDAARWPGPGEGGRERKRLLLWGRFCAGVV
EGTGAQIILDCALPGPSARPNSRLLRERAALAFSLVCLCAGLRPASSVVQ
GGIVSLLRCRDGEVVGGAASAALWALCRVPVNRKAFAKARVVSCLMPLSE
WSREKGYSSVHTYCLAALYLLSQEPKNALQITNHGAGIAKLVSWATPMNG
DHDCEDLLLMITVEDNAKTASCLGVIRSRCLMLPEGMKALADGLASYSLI
QLVLQLLRVGVWVKSVLPLTLREAQGVLFAVQDRAEYRGYCESICGGDPF
GVEDTLALQLQRPGVKYAALAGDAVVGLASLSVTLASRRRLAVNGTVESV
GRLLARSMATERGGGREKGSKGDREAVRNMAKLLKNLSSVPEAHRRLSNR
PLLPLITRLWEESPDEATSQLACHVLANLSRSDVPGVRNRLFQLHLAAES
EVVRRTRASGGAGTSPAPIAKQKPSATVPRQGFASSSTATGAQQGDTNIR
DDDTVSLSSSVFRRDGFVEGHCFKGNGCTSDAKSAAVLLSQEAIRRDARR
DAQYRLRLMPAALWGSRARHVDDGCNGEDGLDVAGIVEKQRTRQTLLIDG
FDEASGAVPVESATSTLNAKHDRHQAKRDGSCPSKQKIGGATAVVMQSSV
GDSDDGGGDGIVFQGTANVSQAASLKRPAVTANVPLRWQSRVVALSSLRD
SLTGGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR011992EF-hand-dom_pair
IPR016024ARM-type_fold