prot_Ecto-sp13_S_contig141.3201.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig141.3201.1
Unique Nameprot_Ecto-sp13_S_contig141.3201.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length565
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig141.3201.1 vs. uniprot
Match: D8LET5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET5_ECTSI)

HSP 1 Score: 711 bits (1836), Expect = 1.340e-253
Identity = 409/459 (89.11%), Postives = 421/459 (91.72%), Query Frame = 0 
Query:    1 MEDHARRVSDELRHKHIRTLEVLRQLIDENNAIRKKLKVFEGEKRVPDGATDLREKPNANNQNEEELEVTDGVDTTAASTIHTHVEIERLMAQLAQAQAETTKARAAEEASELTLAVLLAQNKVLETSRAAVERRCQEQVEHFEAEIAQLKEQCASKIAEAQAAQERAKLDVSRLESEVEELRHNTSQAALSRLGTAWMDDGDDDESVLSQREVVNLQRCLRAVSRRESTAKRRCLDLERQAKSEVLRRESVERELRALQAVAANITAPNGWPQIE---RVPPLPAVPNRNRRSNGGNTVRKGRSGGASITLVDPPPELTCDKVTDPQPVVVLPLACPGGSEIDDDGSVASLDGGPRKKAATVVHVEDESNLGSGIRRLRESEKILQESNAKLQRELRQTVKRLEKAEAFASDMEAELQKVAGDGVTFETFVVLKRDNQALKTQLAEIKQAYSMVLASS 456
            MEDHARRVSDELRHKHIRTLEVLRQLIDENNAIRKKLKVFEGEKRVPDGATDLREK NANNQNEEE +VTDGVDTTA      +V IER MAQLAQAQAETTKARAAEEASELTL VLLAQNK LETSRAAVERRCQEQVE FEAE+AQLK+Q AS IAEAQAAQERAKLDVSRLESEVEELRHNTSQAALSRLGTAWMDDGDDDESVLSQREVVNLQRCLRAVSRRESTAKRRCLDLERQAKSEVLRRE VERELRAL+AVA N  APNG PQIE   RVPPLPAVPNRNRRSNGGNTVRKG SG  +I L DPPPELTC+KV +PQPVV LPLACPGGS+IDDDGSVASLDGGPRK AATVV VEDESNLGSGIRRLRESEKIL+ESNAKLQRELRQT KRLEKA AFASD+EAELQKVAGDGVTFETFVVLKRDNQALKTQLAEIKQA   +LA S
Sbjct:    1 MEDHARRVSDELRHKHIRTLEVLRQLIDENNAIRKKLKVFEGEKRVPDGATDLREKRNANNQNEEEFKVTDGVDTTA------NVGIERAMAQLAQAQAETTKARAAEEASELTLGVLLAQNKDLETSRAAVERRCQEQVERFEAEMAQLKQQFASTIAEAQAAQERAKLDVSRLESEVEELRHNTSQAALSRLGTAWMDDGDDDESVLSQREVVNLQRCLRAVSRRESTAKRRCLDLERQAKSEVLRREGVERELRALRAVADNFAAPNGGPQIEPFQRVPPLPAVPNRNRRSNGGNTVRKGHSGAPTI-LADPPPELTCEKVAEPQPVVALPLACPGGSDIDDDGSVASLDGGPRKNAATVVDVEDESNLGSGIRRLRESEKILRESNAKLQRELRQTAKRLEKAVAFASDVEAELQKVAGDGVTFETFVVLKRDNQALKTQLAEIKQARKTLLARS 452
[Close]
BLAST of mRNA_Ecto-sp13_S_contig141.3201.1 vs. uniprot
Match: A0A6H5KEF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEF1_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 2.440e-18
Identity = 54/82 (65.85%), Postives = 55/82 (67.07%), Query Frame = 0 
Query:    1 MEDHARRVSDELRHKHIRTLEVLRQLIDENNAIRKKLKVFEGEKRVPDGATDLREKPNANNQNEEELEVTDGVDTTAASTIH 82
            MEDHARRVSDELR                         VFEGEKRVPDGATDLREKPNANN NEEE+EVTDGVDTTA STIH
Sbjct:    1 MEDHARRVSDELR-------------------------VFEGEKRVPDGATDLREKPNANNHNEEEVEVTDGVDTTAVSTIH 57
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig141.3201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LET5_ECTSI1.340e-25389.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEF1_9PHAE2.440e-1865.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 428..448
NoneNo IPR availableCOILSCoilCoilcoord: 87..107
NoneNo IPR availableCOILSCoilCoilcoord: 133..185
NoneNo IPR availableCOILSCoilCoilcoord: 373..414
NoneNo IPR availableCOILSCoilCoilcoord: 23..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig141contigEcto-sp13_S_contig141:8265..16072 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig141.3201.1mRNA_Ecto-sp13_S_contig141.3201.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig141 8203..16072 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig141.3201.1 ID=prot_Ecto-sp13_S_contig141.3201.1|Name=mRNA_Ecto-sp13_S_contig141.3201.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=565bp
MEDHARRVSDELRHKHIRTLEVLRQLIDENNAIRKKLKVFEGEKRVPDGA
TDLREKPNANNQNEEELEVTDGVDTTAASTIHTHVEIERLMAQLAQAQAE
TTKARAAEEASELTLAVLLAQNKVLETSRAAVERRCQEQVEHFEAEIAQL
KEQCASKIAEAQAAQERAKLDVSRLESEVEELRHNTSQAALSRLGTAWMD
DGDDDESVLSQREVVNLQRCLRAVSRRESTAKRRCLDLERQAKSEVLRRE
SVERELRALQAVAANITAPNGWPQIERVPPLPAVPNRNRRSNGGNTVRKG
RSGGASITLVDPPPELTCDKVTDPQPVVVLPLACPGGSEIDDDGSVASLD
GGPRKKAATVVHVEDESNLGSGIRRLRESEKILQESNAKLQRELRQTVKR
LEKAEAFASDMEAELQKVAGDGVTFETFVVLKRDNQALKTQLAEIKQAYS
MVLASSPSRKVNVSFSDAALRKSPIRTDSNHGRGGSVRNARGLSISIGSS
QRPPSSRSRPSQEGSGSSLSSPSHRRVRSLWQSSSLSRGRTAPLRAVCLY
KRAESMGALDNEQR*
back to top