mRNA_Ecto-sp13_S_contig14093.3199.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14093.3199.1
Unique NamemRNA_Ecto-sp13_S_contig14093.3199.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14093.3199.1 vs. uniprot
Match: D7FQR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR2_ECTSI)

HSP 1 Score: 570 bits (1469), Expect = 2.020e-196
Identity = 307/347 (88.47%), Postives = 317/347 (91.35%), Query Frame = 1
Query:    1 HCFLPLAE*DQQQIAMQVLVRDDLADALIQTASSTLRNAATSNANQDASSDGVA-PMTDFTSATKSSFPSTWSPGSSIQLMPPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCTKCNGLTFIDASALRTILELTSLGDFGKVRTENLPPCVGCGQTAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHLHIQWRKAEIVRQHTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVLRTGFRPPRILVEQNIREIGETKLHSD**DEKC*REKPSW*GASRR 1038
            HCFLPLAE DQ QIAMQVLV DDLADALIQTASSTLRNAATSNANQDASSD VA   T+ TSATKSSFPSTWSPGSSIQL+PPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCT+CNG+TFIDASALRTILEL SL DFGKVR ENLPPCVGCG+TAGLRVGAHDFLSLI+GGKEALARRRRLERIAAKMLQRAFRRHLHIQWRK+EIVRQ TIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVLRTGFRPPRI+VEQNIREI    L  +   E   R +  W G S R
Sbjct:    2 HCFLPLAEQDQYQIAMQVLVGDDLADALIQTASSTLRNAATSNANQDASSDDVARTTTNGTSATKSSFPSTWSPGSSIQLIPPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCTQCNGMTFIDASALRTILELKSLVDFGKVRPENLPPCVGCGETAGLRVGAHDFLSLIQGGKEALARRRRLERIAAKMLQRAFRRHLHIQWRKSEIVRQRTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVLRTGFRPPRIVVEQNIREIATRVLERE--AELVGRIQARWRGLSVR 346          
BLAST of mRNA_Ecto-sp13_S_contig14093.3199.1 vs. uniprot
Match: A0A836CFY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFY4_9STRA)

HSP 1 Score: 160 bits (404), Expect = 2.060e-38
Identity = 121/355 (34.08%), Postives = 158/355 (44.51%), Query Frame = 1
Query:  229 IQLMPPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCTKCNGLTFIDASALRTILELTSLGD-----------------------------------------------------------------------------------------------------------FGKVRTENLPPCVGCGQTAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHLHIQWRKAEIVRQHTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVLRTGFRPPRILVEQNIREIGETKL 972
            +QL+PP+ +D TD+SL RRA    FD  G+  +RGLRR LFY SG+++C  CN +TF+DA+ALRT + L                                                                                                                 G    E LP C GCG TA LRVG  DF   I  G   LA+R    R AA ++QRA+R +L ++  +A  VR  T  LL YR A+ +QA++RGRLGRRV  T++ LRV+   H  ++  AL   P R+R+FWY  +AE+  L+ADY  LV RTGFRPPR LVE NI E+    L
Sbjct:   16 VQLVPPQQNDCTDQSLPRRAE-GAFDACGFAERRGLRRSLFYVSGFVTCAACNAVTFVDAAALRTAMHLRGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPASSDAGAVAAVGGSATAGRPQSPRHSRQQPALNAAPAAAHSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGAAPAEALPVCSGCGLTATLRVGVRDFTHDIAQGHVDLAQRAARRRGAAAVVQRAYRSYLAVRRDRALRVRLLTKHLLEYRCARAVQAVMRGRLGRRVARTQRHLRVLAGCHPAVLHWALHGCPERRRLFWYHIKAEQDLLFADYVALVERTGFRPPRGLVEANIAELAARAL 369          
BLAST of mRNA_Ecto-sp13_S_contig14093.3199.1 vs. uniprot
Match: A0A7S2R5D9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5D9_9STRA)

HSP 1 Score: 156 bits (394), Expect = 3.190e-37
Identity = 93/248 (37.50%), Postives = 145/248 (58.47%), Query Frame = 1
Query:  217 PGSSIQLMPPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCTKCNGLTFIDASALRTILELTSLGDFGKVRTENLPPCVGCGQTAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHLHIQWRKAEIVRQHTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVLRTGFRPPRILVEQNIREIG 960
            P S++   PP+++    RS  + A    FD  G+    GL++ LFY S +L+C+KCN +  ID+   R+   L         R E LP C  CG T    VG+HD    I   +E L    R ++ A  ++QR++R +L  QW +AE  R+    +L YR+A +I+A++RGRLGRR  +T   +R++ +AH  L+  A+    +++RVFWYK + + + LY DY +L  RTGF+PPR++VE+N++EI 
Sbjct:   96 PSSAVAHEPPQMTCLPARS--KAADAIRFDSSGFNTGIGLQKDLFYWSPFLTCSKCNNMAIIDSMNARSFSGLMQTSLAKTARAEPLPKCSVCGSTQDWWVGSHDLTKFIGASREELEALLRRQKKAVVVIQRSYRFYLRRQWGRAERQRKKIRAMLEYRAASIIEALIRGRLGRRKAKTTVSIRIIMRAHSKLVSRAVSDRSYKRRVFWYKPD-QLKILYLDYVVLCERTGFQPPRVVVEENLKEIA 340          
BLAST of mRNA_Ecto-sp13_S_contig14093.3199.1 vs. uniprot
Match: F0YRG3_AURAN (Expressed protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YRG3_AURAN)

HSP 1 Score: 149 bits (377), Expect = 3.550e-37
Identity = 110/271 (40.59%), Postives = 155/271 (57.20%), Query Frame = 1
Query:  175 FTSATKS-SFPSTWSPGSSIQLMPPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCTKCNGLTFIDASALRT--------ILELTSLGDFGKVRTENLPPCVGCGQTAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHLHIQWRKAEIVRQHTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVLRTGFRPPRILVEQNIREIG 960
            FT+  K+ + P++++ GSS+ L+ PKL DT+DRSL         D    R +  L RP+FY + Y++C KCN L FIDA+ +R+        I E+ S GD      E L  C  C  TA   +GAHDFL  I G K  L ++ ++   AA +L R++R +L  Q  +A   R+     L+   A +I+A+LRGRLGRR   T  +L  V+KAH + +  AL      K VFWYK++ + R L+ DY +LV RTGF PPR +VE NI+EI 
Sbjct:   34 FTATEKAMALPTSFTRGSSMNLVTPKLVDTSDRSLVETFSKTFRDG---RKESDLERPMFYLTPYITCDKCNTLMFIDAAKVRSFSARMPGGICEV-SAGD------ETLGVCPSCASTANFCLGAHDFLGKIAGSKAELIKQIKIRHAAAFLLGRSYRFYLRRQCARACRTREKVWAYLQRLCAAIIEAVLRGRLGRRKARTCAYLNYVQKAHPISLSKALSLGGEFK-VFWYKSKEQIRLLFNDYLVLVERTGFVPPRYVVEANIQEIA 293          
BLAST of mRNA_Ecto-sp13_S_contig14093.3199.1 vs. uniprot
Match: A0A8J2X0I4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0I4_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.440e-30
Identity = 101/272 (37.13%), Postives = 144/272 (52.94%), Query Frame = 1
Query:  199 FPSTWSPGSSIQLMPPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCTKCNGLTFIDASALRT----ILELTSLGDFGKVRTENLPPCVGCGQTAGLRVGAHDFLSLIE----GGKEALARRRRLERIAAKMLQRAFRRHLHIQWRKAEIVRQHTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKAHRLLIKHAL----------DHYPHRKRVFWYKNEAEERQLYADYRMLVLRTGFRPPRILVEQNIREIG 960
             PS+++  S + L+   + DTTDR L + A    F P     +R +++PLFY + +++C+KCN + FIDA+  R     + E   L   G    E L  C GC  T  L VGAHDF+  IE    G +EA+A+  +  + AA +L   +R +L  Q  +A   RQ     L +R A ++++  RGRLGRR   T + LR +K  H + +K AL                K+VFWY  + +   LY DY +L  RTGF PPRI+VEQNI EI 
Sbjct:   41 LPSSFTRDSEMHLVDQHMIDTTDRHLVK-AFCEQFRPGAT--ERDMQKPLFYLTPFITCSKCNSILFIDAANARCFGAPVPESVRLKRGGN---ETLAVCPGCAMTENLEVGAHDFMEDIEDASLGAREAMAKEMKKRKRAASLLIMVYRFYLRRQLARAARTRQKCRYYLYHRCASIVESAARGRLGRRRARTFENLRYIKNRHPISLKKALAQKFEVDKRTGESKRLKKVFWYHTKVQLDCLYRDYFILCQRTGFVPPRIIVEQNIEEIA 306          
BLAST of mRNA_Ecto-sp13_S_contig14093.3199.1 vs. uniprot
Match: A0A8K1CDF9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDF9_PYTOL)

HSP 1 Score: 94.4 bits (233), Expect = 7.160e-17
Identity = 71/216 (32.87%), Postives = 114/216 (52.78%), Query Frame = 1
Query:  346 LFY---KSGYLSCTKCNGLTFIDASALR---TILELTSLGDFGKVRTENLPPCVGCGQTAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHL-HIQWRKAEIVRQHTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVLRTGFRPPRILVEQNIREIGETKL 972
            LFY   K+ YL+C++CN +TFID   +R      +  +L  +     E +P C GCG T  LR G   F   I   ++A+    R    A +++QR  R  +  +++R+ ++  +  I+ +  +SA ++Q  +RG   RR    E+ LR+++  H  ++K AL   P    VFWY N +E + L+ +YR  V R+G +PP + VE NI EI    L
Sbjct:   40 LFYSDFKTPYLTCSRCNSVTFIDVRRVRPKDAPRDPDALSLY-----EQVPICAGCGTTKYLRAGVVSFQEKIAEEQQAIKEFERKRGPATELIQRIARGFMGRLEYRRRKLAWERYIRKIN-QSATMVQTRVRGMQARRRTILERCLRIIRTLHPSILKFALTARPDCPPVFWYDNPSELQILFWNYREFVRRSGGKPPLVKVETNILEITRRML 249          
BLAST of mRNA_Ecto-sp13_S_contig14093.3199.1 vs. uniprot
Match: A0A329SZ32_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SZ32_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.500e-16
Identity = 68/212 (32.08%), Postives = 105/212 (49.53%), Query Frame = 1
Query:  364 YLSCTKCNGLTFIDASALRTILELTSLGDFGKVRT-----ENLPPCVGCGQTAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHL-HIQWRKAEIVRQHTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVLRTGFRPPRILVEQNIREIGETKLHSD 981
            YL+C +CN +TF+D   +R   +  +    G+        E +P C GCG T  LR G   F   IE  + A+    R    A  +LQR  R  L  +++R+  + R+  ++ ++ R+A  IQ  +RG   RR    E+ LR+++     ++ +AL   P+   VFWY N AE    Y +YR  V R+G +P  I VE N+ EI    L  +
Sbjct:   62 YLTCQRCNSVTFVDLKRVRRKADQLAAAKVGEGEDTTCLYEQVPKCPGCGSTRYLRAGVVSFQEQIEEERNAIKEFERRRVPATALLQRIARGFLGRMEFRRRLVERERYLRKIK-RAATKIQTRVRGMQARRRTVIERCLRIIRFMAPQILSYALASRPNEPPVFWYSNTAELSVFYWNYREYVRRSGGKPTLIKVENNVLEITRRVLRRE 272          
BLAST of mRNA_Ecto-sp13_S_contig14093.3199.1 vs. uniprot
Match: H3GJ84_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJ84_PHYRM)

HSP 1 Score: 92.4 bits (228), Expect = 3.210e-16
Identity = 69/207 (33.33%), Postives = 100/207 (48.31%), Query Frame = 1
Query:  364 YLSCTKCNGLTFIDASALRTILELTSLGDFGKVRTENLPPCVGCGQTAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHL-HIQWRKAEIVRQHTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVLRTGFRPPRILVEQNIREIGETKLHSD 981
            YL+C +CN +TFID   +R   +     +      E +P C GCG T  LR G   F   IE  + A+    R    A  +LQR  R  L  +++R+  + R   ++ +  R+A  IQ  +RG   RR    E+ LR++      ++ +AL   P+   VFWY N AE    Y +YR  V R+G RP  I VE N+ EI    L  +
Sbjct:   64 YLTCQRCNSVTFIDVLRVRRKADQLGEREDTTFLYEEVPKCPGCGSTRYLRAGVVSFQEQIEEERNAIKEFERRRVPATALLQRIARGFLGRLEFRRRLVARDRYLRKIN-RAATRIQTRVRGMQARRRTVIERCLRIISFMAPQILSYALASRPNEPPVFWYTNTAELSVFYWNYREYVRRSGGRPTLIKVENNVLEITRRVLRRE 269          
BLAST of mRNA_Ecto-sp13_S_contig14093.3199.1 vs. uniprot
Match: F0Y6T7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6T7_AURAN)

HSP 1 Score: 86.7 bits (213), Expect = 5.210e-14
Identity = 82/264 (31.06%), Postives = 117/264 (44.32%), Query Frame = 1
Query:  175 FTSATKS-SFPSTWSPGSSIQLMPPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCTKCNGLTFIDASALRTILELTSLGDFGKVRTEN--LPPCVGCGQTAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHLHIQWRKAEIVRQHTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVLRTGFRPPRILVEQNIREI 957
            FT+  K+ + PS+++  SS+ L+ PKL DT+DRSL   A    F   G   +  L RP+FY + YL+C KCN L FIDA+  R      S  D  K R ++  L  C  C  TA L++GAHDFL  I G                          +HI +  +  V               ++  L   L + +    +                        +VFWYK++ + R L+ +Y +L  RTGF PPR +VE N+REI
Sbjct:  596 FTAKEKAMALPSSFTRSSSMNLVTPKLVDTSDRSLVE-AFSKTFRSGG--DETDLERPMFYLTPYLTCDKCNSLMFIDAANARNFGARMSR-DTCKRRADDEVLGMCPSCASTANLQLGAHDFLDKIAG--------------------------VHIDFTFSGNVH--------------VRIELEPSLNKALSPGGEI-----------------------KVFWYKSKEQVRLLFENYLVLAERTGFLPPRYVVESNVREI 792          
BLAST of mRNA_Ecto-sp13_S_contig14093.3199.1 vs. uniprot
Match: A0A6A4FWP5_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FWP5_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 5.650e-13
Identity = 69/217 (31.80%), Postives = 104/217 (47.93%), Query Frame = 1
Query:  364 YLSCTKCNGLTFIDASALRTILE-----LTSLGDFGKVRT-----ENLPPCVGCGQTAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHL-HIQWRKAEIVRQHTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVLRTGFRPPRILVEQNIREIGETKLHSD 981
            YL+C +CN +TFID   +R   +     +  L D  +        E +P C GCG T  LR G   F   IE  + A+    R    A  +LQR  R  L  +++R+  + R+  ++ +  R+A  IQ  +RG   RR    E+ LR+++     ++ +AL    +   VFW+ N AE    Y +YR  V R+G RP  I VE N+ EI    L  +
Sbjct:   64 YLTCQRCNCVTFIDVQRVRRKADQLAASMQPLNDADEREDTMPLYEQVPKCPGCGSTRYLRAGVVSFQEQIEEERNAIKEFERRRVPATALLQRIARGFLGRLEFRRRLLERERYLRKIN-RAATRIQTRVRGMQARRRSVIERCLRIIRFMAPQILSYALAARANEPPVFWHTNTAELGVFYWNYREYVRRSGGRPTLIKVENNVLEITRRVLRRE 279          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14093.3199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FQR2_ECTSI2.020e-19688.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CFY4_9STRA2.060e-3834.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2R5D9_9STRA3.190e-3737.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0YRG3_AURAN3.550e-3740.59Expressed protein (Fragment) n=1 Tax=Aureococcus a... [more]
A0A8J2X0I4_9STRA1.440e-3037.13Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8K1CDF9_PYTOL7.160e-1732.87Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A329SZ32_9STRA2.500e-1632.08Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
H3GJ84_PHYRM3.210e-1633.33Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
F0Y6T7_AURAN5.210e-1431.06Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6A4FWP5_9STRA5.650e-1331.80Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14093contigEcto-sp13_S_contig14093:469..3902 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score333.2
Seed ortholog evalue9.6e-89
Seed eggNOG ortholog2880.D7FQR2
Model size1666
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.Short calmodulin-binding motif containing conserved Ile and Gln residues.
EggNOG OGs2A3HT@1,2RY5B@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_000200.1
Cds size678
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14093.3199.1prot_Ecto-sp13_S_contig14093.3199.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14093 1784..3902 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462753.4270713-UTR-Ecto-sp13_S_contig14093:468..10181681462753.4270713-UTR-Ecto-sp13_S_contig14093:468..1018Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14093 469..1018 +
1681462753.4415956-UTR-Ecto-sp13_S_contig14093:1345..17831681462753.4415956-UTR-Ecto-sp13_S_contig14093:1345..1783Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14093 1346..1783 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462753.4497585-CDS-Ecto-sp13_S_contig14093:1783..17891681462753.4497585-CDS-Ecto-sp13_S_contig14093:1783..1789Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14093 1784..1789 +
1681462753.4585564-CDS-Ecto-sp13_S_contig14093:2073..21851681462753.4585564-CDS-Ecto-sp13_S_contig14093:2073..2185Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14093 2074..2185 +
1681462753.4708135-CDS-Ecto-sp13_S_contig14093:2273..23821681462753.4708135-CDS-Ecto-sp13_S_contig14093:2273..2382Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14093 2274..2382 +
1681462753.480015-CDS-Ecto-sp13_S_contig14093:2601..27281681462753.480015-CDS-Ecto-sp13_S_contig14093:2601..2728Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14093 2602..2728 +
1681462753.48821-CDS-Ecto-sp13_S_contig14093:3075..31851681462753.48821-CDS-Ecto-sp13_S_contig14093:3075..3185Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14093 3076..3185 +
1681462753.5650225-CDS-Ecto-sp13_S_contig14093:3503..36491681462753.5650225-CDS-Ecto-sp13_S_contig14093:3503..3649Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14093 3504..3649 +
1681462753.5833328-CDS-Ecto-sp13_S_contig14093:3834..39021681462753.5833328-CDS-Ecto-sp13_S_contig14093:3834..3902Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14093 3835..3902 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14093.3199.1

>prot_Ecto-sp13_S_contig14093.3199.1 ID=prot_Ecto-sp13_S_contig14093.3199.1|Name=mRNA_Ecto-sp13_S_contig14093.3199.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=226bp
MKSARERSRAGEAHPGAVEGTERSALLGRVPQGAKETSGAEQNILADYLA
TRATKSNDDACTEGMSRLRRAYVTERQEELTARLLGHSNPKLAGGLKMKA
FFESPYGDDVVSGLMNHQVWQAWQQRKDLEQKDLERQKRAEWVRLKQLED
PQLAMYFKEEMTARNVHVINKLRWDRRALKNVASTLKDFNRTGGRKYGFP
ETVTLLTLLFTRSIMKNPSIELGFET
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mRNA from alignment at Ecto-sp13_S_contig14093:469..3902+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14093.3199.1 ID=mRNA_Ecto-sp13_S_contig14093.3199.1|Name=mRNA_Ecto-sp13_S_contig14093.3199.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3434bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14093:469..3902+ (Ectocarpus species13 EcNAP12_S_4_19m)
CACTGCTTCCTGCCGCTTGCAGAGTAGGATCAACAGCAAATCGCCATGCA AGTACTTGTGCGGGATGATCTTGCTGATGCTCTGATCCAGACGGCTTCGT CGACCCTTCGGAATGCCGCCACCTCCAACGCAAACCAAGATGCATCTTCC GACGGTGTAGCCCCTATGACCGATTTCACTAGCGCGACCAAGAGCTCCTT TCCATCAACTTGGTCACCCGGTAGCAGTATTCAGCTCATGCCGCCTAAAC TGAGCGATACCACCGACAGGAGCTTGTTCCGAAGGGCGCGACTAGCAGTG TTCGACCCGCATGGGTATCGACATCAGAGAGGCCTCCGACGGCCCCTTTT CTACAAGAGCGGGTACCTCAGCTGCACGAAGTGCAACGGCTTGACCTTTA TCGATGCCTCGGCCCTGCGAACCATCCTCGAGCTAACGAGTTTGGGGGAT TTCGGCAAGGTCCGGACCGAGAATCTGCCTCCGTGCGTTGGGTGTGGCCA GACGGCCGGCTTGCGGGTCGGGGCACATGACTTCTTGAGCCTTATCGAAG GTAACAGCTAGTCTATACATGCACCGCAACACCAGGAGGCGTTGTACTCC AATTCAAACTTCAAATCACAGCTGTGTTGATGCTTGTTTGATACCATACA AGTTAGGGCGAACATATTTGCTGTACATTTTGACACAAGCATTGCTGCTG TACCTTTCGGTGATGATGTCATAAAGGCACGGCCGTACAAGTCATTCGAC GCAAACATCAGATAGTCTAGACATGTACCCTGCTGGAATGCATCCGTAGT GTGTTGAAGAAACACGCGGGTGAACTCTACAGGCTAACGCGTTTTTCCGC AAACGGGTTGCGTGCTGTGTCTCCCAGGAGGGAAGGAGGCGCTAGCGCGT CGACGGCGGTTGGAGCGAATCGCCGCAAAAATGCTTCAGCGTGCTTTCCG ACGACATCTACACATTCAGTGGAGAAAAGCCGAAATCGTACGGCAGCACA CCATACAGCTGCTACGGTATCGCTCGGCGCAGGTCATCCAAGCGATGTTG CGGGGGCGTTTGGGCCGTCGCGTGTTTGAGACGGAGAAGTGGCTCAGGGT AGTGAAAAAAGCCCACCGGTTGCTCATCAAGCATGCGTTGGACCACTACC CACATCGAAAAAGGGTGTTTTGGTACAAGAACGAAGCGGAAGAGCGACAG CTTTACGCCGACTACCGAATGCTGGTGCTGAGGACAGGTTTTCGGCCGCC ACGTATATTGGTGGAACAAAACATCCGCGAGATTGGTGAGACCAAACTCC ACTCAGATTGATGAGATGAAAGTCCACGCTGTGCCGTTGTGTTGGTTCCT CTTGTGGAATGGCTGCGCTCCCCTTTCAACCGCAGCAAAATATGACGCTA TTATGAGTCTCTAGGCACAGCTTTCAATTCGAGATACTTTATATAGTACC CTTCGGCGTGAAACAGGGCACATCTTCACGTATACGTTTTTTACAGAAGA CATGTATGATGACTCCCACGTGGATCCATCTTCCAACACCACAGCTCTCC TCTCTGTACAACATGAAACTCAAACACGCCGGCACATATCGTTCGCAGCA ACTAGAGTGCTAGAGAGAGAAGCCGAGCTGGTGAGGCGCATCCAGGCGCG GTGGAGGGGACTGAGCGTTCGGCGCTACTTGGTCGTGTTCCGCAGGGAGC TAAGGAGACATCGGGAGGTGCGCGCGAGCATGGTCTTCCGTCTTCAGCGC ACCGTGAGAGGTTGGTCTCACCGCAAGCGTTTTTCCAAGCTCAAGTCCCA AAAAGCAGAGCAGAACATACTGGCGGACTATCTGGCCACGAGAGCAACCA AGAGCAACGACGACGCGTGCACGGAGGGCATGTCAAGGCTCCGCAGAGCT TACGTTACGGAAAGGTATGCTAAGGCCTCGCCGCCGTTTGCACGGATTGC TTGTTGCTCTGAGAGACCACGTGCAAAGTCTCCACGCGATGTCGGTGTCT TTTTCGACAAGGCTCTGCCGGTGATTCTAAAAACGTTTTGGAATGCCGCA GTACGCGGCAGCTATAGTAATCGATGAAGTTCCCCCTCAAGAAAAGCTCT GACTGTTCGGATGAATTCTTCGGCGAAATGCAGGCAGGAAGAGCTGACGG CACGTTTATTGGGGCACTCCAACCCGAAGCTAGCAGGGGGCTTGAAGATG AAGGCGTTCTTTGAAAGTCCTTACGGAGATGACGTGGTATCGGGACTGAT GAACCATCAGGTACATGAAACGCGTTGTACAATAAAGTAGTGGCGTCCAT CGAGTGCACGTCAATTACCCTCTCAAGAGAATAATCAAGTGTTGTCACGC GCTACGTATGACCAAACAGTAGCAGAGTACCATTGTATTTGGCGATGAAC GGTAGAAAATAGACATCTGGGAGCCCCGTTCATGCCGGTGATGCCAGCAC CGAGGGTACAAAATTACCAGCAAATCGACATCGACTTGACGGTGGCGGAT TGATCGCTCGACCTTTGTCTTAGACATATGCGTTAGCTCCCTCGCTCGAT GCGGCCAGCGGGCTTGTTGTCGTAACTGATCGTAAATTGGTTCATTGCCA ACGGCAGGTCTGGCAAGCATGGCAACAGAGGAAAGATCTCGAGCAAAAAG ATCTTGAACGACAAAAGAGGGCCGAGTGGGTGCGCCTGAAACAACTCGAA GACCCCCAACTGGCCATGTGAGAGTGCAGTGTGGCTCATATTGTCAGTTC CACGGCACTACTGCTGCCGTTACTTTGCGCGATGAGAAACACTTTGCCTA CGTTCCATCGGTGTGCATCTTTATGACTTCGACGTCCGTCGTGTAGGACT ACCATGTGCATGCATACTGTTCAGGACAACTAGGTTGATGAACCGCGGTA ATGGTCGAAACTTCATCCAAAAAGCAACGATTTTCAACTCGGCGAGGCAA CGACGAGGCTCAACATCTGCCAGTAAGTTTCGGAGGAGTGCATTGCCACC ACCCACGAAGTGCCTGTTTCTCGTCTTCCTGCCAGGTATTTCAAAGAAGA GATGACAGCGAGGAACGTGCACGTGATCAACAAGCTGCGTTGGGACCGGC GTGCTCTCAAGAATGTCGCGTCCACTTTGAAAGACTTCAACCGAACCGGG GGTCGAAAGTACGGCTTCCCAGAAACCGTGAGTACCAGCCACGCTGTTGA CGATCGAACACCCTTCGACCGTAATATATCGCCGTGGTTTCATTCACTAC CCGTGGCCCTCCTCCAGTTTCTGTACATGCTCTTTGGTATTTCCTCTTGT TGGTTTAAGGGTTCGACCCGGATTGCACTTATGAACTCTTCTATAGACGG GTTCCGCAAAAACAAGCGCTTTTGACACTGTTGTTCACAAGATCAATAAT GAAGAACCCATCGATCGAGCTGGGATTCGAAACA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14093:469..3902+

>mRNA_Ecto-sp13_S_contig14093.3199.1 ID=mRNA_Ecto-sp13_S_contig14093.3199.1|Name=mRNA_Ecto-sp13_S_contig14093.3199.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=678bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14093:469..3902+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAAAGTGCTAGAGAGAGAAGCCGAGCTGGTGAGGCGCATCCAGGCGC
GGTGGAGGGGACTGAGCGTTCGGCGCTACTTGGTCGTGTTCCGCAGGGAG
CTAAGGAGACATCGGGAGCAGAGCAGAACATACTGGCGGACTATCTGGCC
ACGAGAGCAACCAAGAGCAACGACGACGCGTGCACGGAGGGCATGTCAAG
GCTCCGCAGAGCTTACGTTACGGAAAGGCAGGAAGAGCTGACGGCACGTT
TATTGGGGCACTCCAACCCGAAGCTAGCAGGGGGCTTGAAGATGAAGGCG
TTCTTTGAAAGTCCTTACGGAGATGACGTGGTATCGGGACTGATGAACCA
TCAGGTCTGGCAAGCATGGCAACAGAGGAAAGATCTCGAGCAAAAAGATC
TTGAACGACAAAAGAGGGCCGAGTGGGTGCGCCTGAAACAACTCGAAGAC
CCCCAACTGGCCATGTATTTCAAAGAAGAGATGACAGCGAGGAACGTGCA
CGTGATCAACAAGCTGCGTTGGGACCGGCGTGCTCTCAAGAATGTCGCGT
CCACTTTGAAAGACTTCAACCGAACCGGGGGTCGAAAGTACGGCTTCCCA
GAAACCGTGACGCTTTTGACACTGTTGTTCACAAGATCAATAATGAAGAA
CCCATCGATCGAGCTGGGATTCGAAACA
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