mRNA_Ecto-sp13_S_contig14092.3198.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14092.3198.1
Unique NamemRNA_Ecto-sp13_S_contig14092.3198.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14092.3198.1 vs. uniprot
Match: D8LRY3_ECTSI (DNA-directed RNA polymerase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY3_ECTSI)

HSP 1 Score: 823 bits (2125), Expect = 3.560e-280
Identity = 429/434 (98.85%), Postives = 431/434 (99.31%), Query Frame = 1 
Query:    1 QVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDTAEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEVTKPRFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQASFANLGTGTMDLLLDESKLSQAMELTQLDTTMARLSGAAGSGA 1302
            +VGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAED AEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEVTKP+FDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ  FANLGTGTMDLLLDESKLSQAMELTQLDTTMARLSGAAGSGA
Sbjct: 1115 KVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDMAEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEVTKPKFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ--FANLGTGTMDLLLDESKLSQAMELTQLDTTMARLSGAAGSGA 1546
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BLAST of mRNA_Ecto-sp13_S_contig14092.3198.1 vs. uniprot
Match: A0A6H5L9Y2_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9Y2_9PHAE)

HSP 1 Score: 754 bits (1948), Expect = 4.810e-258
Identity = 389/391 (99.49%), Postives = 390/391 (99.74%), Query Frame = 1 
Query:    1 QVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDTAEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEVTKPRFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQA 1173
            +VGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDK EAEPEAEDTAEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEVTKPRFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQA
Sbjct: 1116 KVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKTEAEPEAEDTAEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEVTKPRFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQA 1506
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BLAST of mRNA_Ecto-sp13_S_contig14092.3198.1 vs. uniprot
Match: A0A836CHC4_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHC4_9STRA)

HSP 1 Score: 538 bits (1386), Expect = 4.940e-173
Identity = 290/433 (66.97%), Postives = 335/433 (77.37%), Query Frame = 1 
Query:    1 QVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEA-EDTAEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEVTKPRFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQASFANLGTGTMDLLLDESKLSQAMELTQLDTTMARLSGAAGS 1296
            +V  GEMCGVLAAQSIGEPITQMTLNTFH+AGVSAKNVTLGVPRVKEIINVA N RTPSLTIYL       D  + QE AKRVVD+LEY+TL D+T STQIYYDPDPR T+++ED E +E   DI   E DD + DRA PWLLR+EL +E  F K L +  IA+++   +   LH+I SD N++K VLR+RV+DD  D  + +P + E+   ADDVA LK LEKNLL LQL GI  I+KVYM E T+P FD   GF QR  EW+LETDGTNLMA LC   +D RRTVSNDVVEC +V GIEGAR SLL+EFRAVVERDGSYVNYRHL TL+DVMTFRG+LMAITRHGINRVDNGPMLRSSFEETVEILMEAA+FAE+DNLKGVTDNIMLGQ   A +GTG MDLLLDE +L  A+   +LD  ++++    GS
Sbjct: 1107 RVSAGEMCGVLAAQSIGEPITQMTLNTFHYAGVSAKNVTLGVPRVKEIINVAANPRTPSLTIYL-----SPDSEQDQESAKRVVDMLEYITLADVTVSTQIYYDPDPRDTIIEEDKECVEAFLDI---ETDDFNADRASPWLLRIELKKEVAFVKGLMIGSIARKITDDYGSALHIISSDDNADKQVLRLRVMDD-DDGEKVDPSSGEEVVRADDVAFLKRLEKNLLVLQLGGIDNINKVYMQEGTRPVFDPDKGF-QRETEWLLETDGTNLMAVLCCPNVDHRRTVSNDVVECLSVFGIEGARMSLLREFRAVVERDGSYVNYRHLGTLVDVMTFRGYLMAITRHGINRVDNGPMLRSSFEETVEILMEAAMFAESDNLKGVTDNIMLGQ--LAQVGTGCMDLLLDEERLKDAVNTKELDAALSKVGINVGS 1527
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BLAST of mRNA_Ecto-sp13_S_contig14092.3198.1 vs. uniprot
Match: A0A6A5AD01_9STRA (DNA-directed RNA polymerase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AD01_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 1.950e-142
Identity = 235/416 (56.49%), Postives = 301/416 (72.36%), Query Frame = 1 
Query:    4 VGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRAR-PWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDTAEADDVAMLKHLEKNLL-RLQLSGIAGISKVYMSEVTKPRFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQASFANLGTGTMDLLLDESKLSQAME 1245
            V  GEM GV+AAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR+KEIIN+AK+V+TPS+ IYL+      D A   E AK++   LEY TL D+T ST IYYDPDP STVV+ED + +  ++D+      D+DT  AR PWLLR+ELNR  + DK L++ EIA ++   +   L  I +D N++KLVLRIR++ +  DK+     A  +   +D   LK +E N+L +++L G+  + KV+M E  + ++DE  GF    KEWVL+TDGTNL+  +C E ID  RT+SND+VE   VLGIE  R +LL E R V+  DG+YVNYRHL+ L DVMTFRGHLMA+TRHGINRVD+GP++R SFEETVEILM+AA+F++ D L GVT+NIMLGQ   A LGTG MDL+LD +KLSQA+E
Sbjct:   19 VAAGEMAGVVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINIAKDVKTPSIQIYLK-----PDCAHDAEKAKQIQSTLEYTTLMDVTASTAIYYDPDPTSTVVEEDADFVASYYDVI-----DEDTPLARSPWLLRIELNRIMMADKNLEMKEIALQIENEYGQDLSCIYTDDNADKLVLRIRIMSEEEDKVSQNGSA--SVGQEDDTFLKRVEHNMLTQMRLRGVPNVKKVFMRENPQNQWDEEKGFIMV-KEWVLDTDGTNLLDIICHESIDASRTISNDIVEIIEVLGIEAVRRALLNEIRNVISFDGAYVNYRHLACLADVMTFRGHLMAVTRHGINRVDSGPLVRCSFEETVEILMDAAMFSQGDELAGVTENIMLGQ--LAQLGTGVMDLVLDANKLSQAIE 419
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BLAST of mRNA_Ecto-sp13_S_contig14092.3198.1 vs. uniprot
Match: A0A7S2W9H4_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W9H4_9STRA)

HSP 1 Score: 414 bits (1065), Expect = 1.820e-136
Identity = 229/422 (54.27%), Postives = 301/422 (71.33%), Query Frame = 1 
Query:    1 QVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEA--------EDTAEA--DDVAMLKHLEKNLL-RLQLSGIAGISKVYMSEVTKPR-FDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQASFANLGTGTMDLLLDESKL 1230
            +V PGEM GVLAAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR+KEIINVAK V+TP LT+YL+E  +        +VA+ V  +LEY  LGDIT  T+IYYDPD  STV+ +D E ++ H++  +E +DD    R  PW+LR+ELN+    +K++ + EI +++   +   L VI++D N++ LV+RIR+++D+P  +  E +         ED  E   +D   LK LEKN+L +L+L GI  ++KV++    K   ++E  GF  +  EWVLETDGTNLM+ L  + ID  RT+SND+VE   VLGIEG RG++L E R V+  DGSYVNYRHL+ L+DVMT  GHLMAI RHGINRVD+GP+LR SFEETV++LM+A+VFAE + LKGVT+NIM+GQ   A +GTG MDLLLDE K+
Sbjct:  194 KVNPGEMAGVLAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVAKTVKTPGLTVYLDESVSS-----DADVARLVCSMLEYTVLGDITKLTEIYYDPDITSTVIAKDREFVKLHYEFSDETQDD--LRRLSPWVLRVELNQTVFLEKKMQMSEIVQQITNEYGEDLDVIKTDDNADDLVVRIRIVNDMPTHMGGEVDDDGNNIIHDEDDVECGQEDDVFLKRLEKNMLGQLKLRGIPDVNKVFLRAGAKRTIWNEETGFGIKD-EWVLETDGTNLMSVLGVDYIDATRTISNDIVEVFVVLGIEGVRGAILSELRNVISFDGSYVNYRHLACLVDVMTMHGHLMAIDRHGINRVDSGPLLRCSFEETVDMLMDASVFAEEEVLKGVTENIMMGQ--LARVGTGDMDLLLDEQKV 605
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BLAST of mRNA_Ecto-sp13_S_contig14092.3198.1 vs. uniprot
Match: A0A3R6YZ27_9STRA (DNA-directed RNA polymerase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YZ27_9STRA)

HSP 1 Score: 430 bits (1106), Expect = 5.140e-136
Identity = 235/416 (56.49%), Postives = 302/416 (72.60%), Query Frame = 1 
Query:    4 VGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRAR-PWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDTAEADDVAMLKHLEKNLL-RLQLSGIAGISKVYMSEVTKPRFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQASFANLGTGTMDLLLDESKLSQAME 1245
            V  GEM GV+AAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR+KEIIN+AK+V+TPS+ IYL+      D A   E AK++   LEY TL D+T+ST IYYDPDP STVV+ED + +  ++D+      D+DT  AR PWLLR+ELNR  + DK L++ EIA ++   +   L  I +D N++KLVLRIR++ +  DK+     A  +   +D   LK +E N+L +++L G+  + KV+M E  + ++DE  GF    KEWVL+TDGTNL+  +C E ID  RT+SND+VE   VLGIE  R +LL E R V+  DG+YVNYRHL+ L DVMTFRGHLMA+TRHGINRVD+GP++R SFEETVEILM+AA+F++ D L GVT+NIMLGQ   A+LGTG MDL+LD  KLSQA+E
Sbjct:  507 VAAGEMAGVVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINIAKDVKTPSIQIYLK-----PDCAHDAEKAKQIQSTLEYTTLMDVTSSTAIYYDPDPTSTVVEEDADFVASYYDVI-----DEDTPLARSPWLLRIELNRIMMADKNLEMKEIALQIENEYGQDLSCIYTDDNADKLVLRIRIMSEEEDKVSQSGSA--SVGQEDDTFLKRVEHNMLTQMRLRGVPNVKKVFMRENPQNQWDEDKGFIMV-KEWVLDTDGTNLLDIICHESIDASRTISNDIVEIIEVLGIEAVRRALLNEIRNVISFDGAYVNYRHLACLADVMTFRGHLMAVTRHGINRVDSGPLVRCSFEETVEILMDAAMFSQGDELAGVTENIMLGQ--LAHLGTGVMDLVLDAKKLSQAIE 907
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BLAST of mRNA_Ecto-sp13_S_contig14092.3198.1 vs. uniprot
Match: A0A7S1UU09_9STRA (DNA-directed RNA polymerase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UU09_9STRA)

HSP 1 Score: 427 bits (1097), Expect = 9.830e-136
Identity = 230/417 (55.16%), Postives = 306/417 (73.38%), Query Frame = 1 
Query:    1 QVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKI-----EAEP-EAEDTAEADDVAMLKHLEKNLLR-LQLSGIAGISKVYMSEVTKPRFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQASFANLGTGTMDLLLDESKL 1230
            +V PGEM GVLAAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR+KEIINVAK+ +TP LTIYLEE  +G      Q++AK V  +LEY  LGD+   T+IYYDPD + T+V++D E ++ ++D+ +  E+D    R  PW LR+ELN    FDK++ + EI + V   + G L+VI +D N+++LV+R+R+++DVP  +     +  P ++ED  + DDV  LK LEK++L  L+L GI  + KV+M    +  +D+ +GF  +  EW+LETDGTNLM+ L  + +D  RTV ND+VE   VLGIEG RG++L+E R V+  DGSYVNYRHL+ L+DVMT +GHLMAI RHGINRV++GP+LRSSFEETV++LM+AA +AE + LKGVT+NIMLGQ   A +GTG MDLLLDE K+
Sbjct:  455 KVNPGEMAGVLAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVAKHPKTPGLTIYLEEDVSG-----DQDIAKLVHSLLEYTVLGDVVKLTEIYYDPDIKETIVEKDREFVKDYYDLSDATEED--LRRLSPWCLRIELNPSVFFDKKMKMNEIVREVNNEYGGDLNVIVTDDNADELVVRVRIVNDVPQGMGQVDDDGNPIQSEDVGQEDDV-FLKRLEKSMLSSLKLRGIDHVKKVFMRNAKRTTWDDESGFGVKD-EWILETDGTNLMSVLGVDYVDATRTVCNDIVEVFQVLGIEGVRGAILRELRNVISFDGSYVNYRHLACLVDVMTMQGHLMAIDRHGINRVESGPLLRSSFEETVDMLMDAATYAEEEILKGVTENIMLGQ--LARVGTGNMDLLLDEQKV 860
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BLAST of mRNA_Ecto-sp13_S_contig14092.3198.1 vs. uniprot
Match: A0A7J9EAE4_9ROSI (DNA-directed RNA polymerase (Fragment) n=2 Tax=Gossypium trilobum TaxID=34281 RepID=A0A7J9EAE4_9ROSI)

HSP 1 Score: 413 bits (1062), Expect = 6.240e-134
Identity = 223/426 (52.35%), Postives = 303/426 (71.13%), Query Frame = 1 
Query:    4 VGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDTAEADDVAMLKHLEKNLL-RLQLSGIAGISKVYMSEVTKPRFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQASFANLGTGTMDLLLDESKLSQAMELTQLDTTMARL 1278
            V PGEM G +AAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR++EIINVAK ++TPSL++YL   A+     + +E AK V   LEY TL  +T +T+++YDPDP ST+++ED++ ++ ++++ +EE      ++  PWLLR+ELNRE + DK+L + +IA+++   FD  L  I +D N+EKL+LRIR+++D   K E   E+     A+D   LK +E N+L  + L GI  I+KV++      +FDE +G+ +  +EWVL+T+G NL+A +C E +D RRT SN ++E   VLGIE  R SLL E R V+  DGSYVNYRHL+ L D MT+RGHLMAITRHGINR D GPM+R SFEETV+IL++AAV+AE+D L+GVT+NIMLGQ   A +GTG   L L++  L  A+EL QL + M  L
Sbjct:  173 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLSPEAS-----KTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE---VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES-----AEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGY-KTGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQ--LAPIGTGDCALYLNDEMLKNAIEL-QLPSYMEGL 581
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BLAST of mRNA_Ecto-sp13_S_contig14092.3198.1 vs. uniprot
Match: S8CQC3_9LAMI (DNA-directed RNA polymerase (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CQC3_9LAMI)

HSP 1 Score: 423 bits (1087), Expect = 1.110e-133
Identity = 224/416 (53.85%), Postives = 300/416 (72.12%), Query Frame = 1 
Query:    4 VGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDTAEADDVAMLKHLEKNLL-RLQLSGIAGISKVYMSEVTKPRFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQASFANLGTGTMDLLLDESKLSQAMEL 1248
            V PGEM G +AAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR++EIINVAK ++TPSL++YL      A+ ++ +E AK V   LEY TL  +T +T+++YDPDP ST+++ED+E ++ ++++ +EE    D D+  PWLLR+ELNRE + DK+L + +IA+++   FD  L  I +D N+EKL+LRIR+++D   K E   E+     A+D   LK +E N+L  + L GI  I+KV++      RFDEI+GF +   EW+L+T+G NL+A LC   +D +RT SN ++E   VLGIE  R +LL E R V+  DGSYVNYRHL+ L D MT+RGHLMAITRHGINR D GPM+R SFEETV+IL++AAV+AE D+LKGVT+NIMLGQ   A +GTG   L L+E  L QA+E+
Sbjct:  430 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL-----NAEASKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIEFVKSYYEMPDEE---IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES-----AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVNRFDEIDGF-KAENEWMLDTEGVNLLAVLCHPDVDSKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLKGVTENIMLGQ--LAPIGTGDCALYLNEEMLKQAIEI 829
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BLAST of mRNA_Ecto-sp13_S_contig14092.3198.1 vs. uniprot
Match: A0A7S4VDJ8_9STRA (DNA-directed RNA polymerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VDJ8_9STRA)

HSP 1 Score: 413 bits (1061), Expect = 1.150e-133
Identity = 229/457 (50.11%), Postives = 312/457 (68.27%), Query Frame = 1 
Query:    1 QVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDTAEA--DDVAMLKHLEKNLLR-LQLSGIAGISKVYM-SEVTKPRFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQASFANLGTGTMDLLLDESKLSQAMELT----QLDTTMARLSGAAGSGAXXXXXXYMGTPSMTP 1347
            +V PGEM GVLAAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR+KEIINVAK V+TP LTIYL       D +   ++ + V  ++EY  LGD+   T+IYYDPD  +TVV +D E ++  +++  E +DD    R  PW+LR+EL+   V DK++ + EI +++   +   L+V+ +D N++ LV+R+R+++D+P   +A    ED  E   +D   LK LEK++L  L+L G+  + KV+M     +  +D+  GF  +  EWVLETDGT+LMA L  E +D  RT+SND+VE   VLGIEG RG++L E R V+  DGSYVNYRHL+ L+DVMT  GHLMAI RHGINRVD+GPMLR SFEETV++LM+A+V+AE + LKGVT+NIM+GQ   A +GTG MDLLLDE K+++A+++      +D +    SG  G+        +   P M+P
Sbjct:  109 KVNPGEMAGVLAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVAKTVKTPGLTIYLR-----PDVSTDADIVRTVHSLIEYTVLGDLVKLTEIYYDPDIENTVVQQDAEFVKDFYELGTESQDD--LRRLSPWVLRIELDLTVVTDKQIKMNEIVQQIRNEYGDDLNVLVTDDNADDLVVRVRIVNDLPPANDAGMAMEDEVEMGQEDDVFLKRLEKSMLTSLKLRGVEDVKKVFMRGGAQRTIWDDEKGFG-KEDEWVLETDGTSLMAVLGVEDVDATRTISNDIVEVFVVLGIEGVRGAILSELRNVISFDGSYVNYRHLACLVDVMTMHGHLMAIDRHGINRVDSGPMLRCSFEETVDMLMDASVYAEEEVLKGVTENIMMGQ--LARVGTGDMDLLLDEQKVARAVDIVTPIDDMDESGMGGSGEGGATPYAPSTPFDNNPGMSP 555
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14092.3198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRY3_ECTSI3.560e-28098.85DNA-directed RNA polymerase subunit n=2 Tax=Ectoca... [more]
A0A6H5L9Y2_9PHAE4.810e-25899.49DNA-directed RNA polymerase subunit n=1 Tax=Ectoca... [more]
A0A836CHC4_9STRA4.940e-17366.97DNA-directed RNA polymerase subunit n=1 Tax=Tribon... [more]
A0A6A5AD01_9STRA1.950e-14256.49DNA-directed RNA polymerase n=2 Tax=Aphanomyces as... [more]
A0A7S2W9H4_9STRA1.820e-13654.27DNA-directed RNA polymerase (Fragment) n=1 Tax=Euc... [more]
A0A3R6YZ27_9STRA5.140e-13656.49DNA-directed RNA polymerase n=1 Tax=Aphanomyces in... [more]
A0A7S1UU09_9STRA9.830e-13655.16DNA-directed RNA polymerase n=1 Tax=Grammatophora ... [more]
A0A7J9EAE4_9ROSI6.240e-13452.35DNA-directed RNA polymerase (Fragment) n=2 Tax=Gos... [more]
S8CQC3_9LAMI1.110e-13353.85DNA-directed RNA polymerase (Fragment) n=1 Tax=Gen... [more]
A0A7S4VDJ8_9STRA1.150e-13350.11DNA-directed RNA polymerase n=1 Tax=Ditylum bright... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14092contigEcto-sp13_S_contig14092:49..4059 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score817.4
Seed ortholog evalue3.4e-234
Seed eggNOG ortholog2880.D8LRY3
Preferred nameRPB1
Model size1377
KEGG rclassRC02795
KEGG koko:K03006
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko05016,ko05168,ko05169,map00230,map00240,map01100,map03020,map05016,map05168,map05169
KEGG ModuleM00180
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0000731,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006351,GO:0006366,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010494,GO:0016070,GO:0016591,GO:0018130,GO:0019438,GO:0019985,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0055029,GO:0061695,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:1990904
Exons7
EggNOG free text desc.DNA-directed 5'-3' RNA polymerase activity
EggNOG OGsCOG0086@1,KOG0260@2759
EC2.7.7.6
Cds size1359
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14092.3198.1prot_Ecto-sp13_S_contig14092.3198.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14092 67..4059 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462753.313707-UTR-Ecto-sp13_S_contig14092:48..661681462753.313707-UTR-Ecto-sp13_S_contig14092:48..66Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14092 49..66 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462753.330466-CDS-Ecto-sp13_S_contig14092:66..2941681462753.330466-CDS-Ecto-sp13_S_contig14092:66..294Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14092 67..294 +
1681462753.3409276-CDS-Ecto-sp13_S_contig14092:603..7671681462753.3409276-CDS-Ecto-sp13_S_contig14092:603..767Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14092 604..767 +
1681462753.3528259-CDS-Ecto-sp13_S_contig14092:1434..15821681462753.3528259-CDS-Ecto-sp13_S_contig14092:1434..1582Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14092 1435..1582 +
1681462753.3628633-CDS-Ecto-sp13_S_contig14092:2079..22351681462753.3628633-CDS-Ecto-sp13_S_contig14092:2079..2235Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14092 2080..2235 +
1681462753.372245-CDS-Ecto-sp13_S_contig14092:2611..28291681462753.372245-CDS-Ecto-sp13_S_contig14092:2611..2829Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14092 2612..2829 +
1681462753.382837-CDS-Ecto-sp13_S_contig14092:3306..35501681462753.382837-CDS-Ecto-sp13_S_contig14092:3306..3550Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14092 3307..3550 +
1681462753.3951418-CDS-Ecto-sp13_S_contig14092:3858..40591681462753.3951418-CDS-Ecto-sp13_S_contig14092:3858..4059Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14092 3859..4059 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14092.3198.1

>prot_Ecto-sp13_S_contig14092.3198.1 ID=prot_Ecto-sp13_S_contig14092.3198.1|Name=mRNA_Ecto-sp13_S_contig14092.3198.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=453bp
MCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVR
TPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPD
PRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKR
LDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEA
EDTAEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEVTKPRFDEINGFA
QRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSL
LKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPML
RSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQASFANLGTGTMDLLLD
ESKLSQAMELTQLDTTMARLSGAAGSGAAGGAGGYMGTPSMTPAGTPHFT
PG*
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mRNA from alignment at Ecto-sp13_S_contig14092:49..4059+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14092.3198.1 ID=mRNA_Ecto-sp13_S_contig14092.3198.1|Name=mRNA_Ecto-sp13_S_contig14092.3198.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4011bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14092:49..4059+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTTGGCCCCGGCGAGATGTGCGGCGTTCTGGCGGCCCAGTCGATCGG
AGAGCCCATCACCCAGATGACGCTCAACACCTTCCACTTCGCCGGCGTTA
GCGCGAAGAACGTTACCCTGGGAGTGCCTCGAGTGAAGGAGATCATTAAC
GTGGCGAAGAACGTACGGACACCGTCCTTGACGATCTACCTGGAGGAAAG
GGCTGCGGGGGCGGACGAGGCGGAAGGACAGGAGGTCGCCAAGCGGGTGA
GTTTGTTTTGGCGTTGTGGTGGAGAAAAGGTGGATGCGTGTTCGCTTAGG
GCATTGGGGTGGTACGTGGGACAAAAGAGGGCAATATATATCATGTAGAG
GGAGAGAAGAGAGAGATAGACAGACTAAGTCGTATTTTTTGTGTGGCGAG
GCGGTATCAGAGACTGCTAGCCTTGTTTGACCGCATAAGGTAGACACGGA
GGAGGGGCGCCAGGGGCGTCTTACCTTAGCCTCGCACTAGACCTCCCCAC
TATAGCAACCAACTGGCCACCTTGCAATCAAACCGACCCAACTCGTTGCA
ACCAGGTGGTGGACATTCTGGAGTACGTGACGCTGGGGGACATCACGACG
TCGACCCAGATCTACTACGACCCGGACCCTCGATCTACGGTGGTGGACGA
GGACGTGGAGCTGCTGGAGGGGCACTTCGACATCCAGGAGGAGGAAGAAG
ACGACAAGGATACCGACAGGTACTGCTGTAGTCGACTACTGTAGTAGCTT
GTTCAGCGCCTTACGGTTGTGCACGTGTTCGTATTCGTTCGTGCATGTAG
CTAATTTAGCGCGCCGAGGTGCTGCTGTCTGTTGCGTTGCACAAATCCGC
CGATTGTGTGAGGTTCGATGTGTGGCTTGTGGAGGTTCTGCTCCGTTGCG
TGCGAGTTGCCTTTGGTTTCGATGATAGTGCGTGTTTCGTTTGGAGGCAG
AGGCGGGGCGATCAGACCGGAACACAACGCATATGGCTATTTTGGCCACG
TTGTGTGAGTAAGAGCGGCGATGGGTGCGTACCATGAGTGTGGAATCCCT
TGTTCTGTGGAACTTCGATACAGGAGTAGCGGGATAATACGCACCAGGAA
ACCATGCCGTAGGTGGTATCAAATTTTCACAACAATTGCACGTGCCCTCA
GCAAACGTCCTTCGTGCTTTGTATTTCATTTTTCTCTCTTCAACACGATG
CATATGTATCCGCAGATATGAGTCCAGGATAAATGGTCAATGAAGCCATA
GCGTTAGCAGCAGCACTTAATGTGTTTCCCCCCGGCAGCACACGGCAATA
TATATTGTAATCGTAAGACCAAAATCTGTTATTCCTTGTTTTTCCCTCGT
GTTTCGTCGTGTGCTGGCTCTCGCGCCCGCCATCAGAGCGAGGCCGTGGC
TGCTCCGCATGGAGCTCAACCGCGAGGCTGTGTTCGACAAGCGTCTGGAC
GTCGTGGAGATCGCCAAGAGGGTTGTCGCTTACTTCGACGGGGGGCTGCA
CGTCATCCGAAGCGACCAGAACTCGGAGAAGCTGGTGAGAAGGCCGTGCC
CTGTTCTTATGGTATAAGCTTGTTGTAGAAAGTGGACCGTGCTGTTGCTG
TTGTTGTGTTGGCATTACAAAACGTTCGGATCTCTCTACCCGGTACCTTC
ATCTGTCGGTAATGGTTTAGCACTTGACGTGGTGGATTTCCGTGGTCACG
GACCCACGTTTACGTACAGAGCAAATTCTTGTTGTCCAAGCCCCTCCCTC
AGTCACGTCTATCCGTCTTTTAGGTGTTTTGTCGTGTCTCGGGCGTTACA
GATGATGAGTGGTCGAATGAATCGATCGCACAGTGTCGTCCATTATAGCT
TGGTTTGCTTTGTCCCGTGTCTGAGGTGCCACGGATGATGACTGCTAGAA
TGAATTGATCGCCCAAATACCGGTTATTAATGCTGTGTGTGCTTTGTTGT
GCTGCGGATGATGGAGTACTTGAATTTATCGATTTCCAAGTGTCAGTTGT
TAACGCCGCGTGTGTTTGTCTCGTGTCTCAGGTGTTGCGGATACGCGTGC
TAGACGATGTGCCCGACAAAATCGAGGCGGAGCCAGAGGCGGAGGACACC
GCGGAGGCCGACGATGTTGCGATGCTCAAGCACCTCGAGAAGAACCTCCT
CCGACTACAGCTGTCCGGTATCGCTGGTATCTCGAAGGTGGGCCGATGCT
GTCGCTGCTGTTGGTTGGTGTTGCTGCTGCTGCTATTGACGTTATTATTG
TTGTTGCTGGTGCTTTTGCCCTTGTTGCTGCTGCTGCTGCTGTTGATATT
GTTGCTTTTGTTTTGTTGAATTAAGAGTAGTAGTGGGATGTCTACCAAAA
GCCTCGAAAGTCAGCGTCGAGGCCCCCGTGCGGGTTGTAGAGACGACTAA
GAACACGCAACCGATACATTGGTGACCCCCCCATATATTATTCTGCGTAT
TTCCTTTTAGGTGTGCAACAAATTCATGATGACCCCCCCCCCCCCCCCCC
CCCGAATGTTACTTTTGTATTTTGTTCTCGCTGCTGTGCTACACTCTCTG
TCTTTCCCGTCAGGTGTACATGTCCGAGGTTACCAAGCCGAGGTTCGACG
AGATCAACGGCTTCGCGCAGCGGCACAAGGAGTGGGTGCTAGAAACTGAC
GGCACGAACCTCATGGCGGCGCTGTGCGCGGAGCAGATCGACCCCAGACG
AACCGTGTCGAACGACGTAGTGGAGTGCTGCACGGTGTTGGGCATCGAGG
GCGCCAGAGGCTCACTTCTCAAGGAGTTCCGGTGAGGAGGAGGCGGGAGG
CGTGGTTGTTTTTTGTCGCAGCGCGTTTTTTGCTGTGTCTCAATGTCGGG
GTTGTCGAAGCTCACGGGTATGGAGCGGATAATGGCTAGCCCTCTGTGTA
TCGCCCGCGAGTTGATTGGGGCGAGAGGCGGGGGTGACCGTTGGTGGTGG
GCGTTGTTTGTCGCAACGACGTTCGTCTTGTGTTTTGTTGGCGTTGTTAA
CTCACGCGGTATCGAGCGGGCTGCTCGGCCGGTGCCTTTCATGGCCGCTC
GCGAATCGGAATGGAGTCTGGAGGGAAGCCAACTGTGTTGTCGCGGTGTC
TGTCAGGATTGTGGTGAACGAAAAATGTTTTCGATGTACATCCTTCTCGC
TCTGTTGCTGCTGCTTGCTGATTCCCACCGTCAATTTTCTGTCGCCGCGT
TTCTCCTCGCCCCGCCCCCTCACCCACCCCCTCCCTACACGCATCAACAA
TCTCGCAGAGCCGTGGTGGAGAGAGACGGTTCCTACGTAAACTACCGGCA
CCTGAGCACCCTGATCGACGTTATGACGTTCCGGGGCCACCTTATGGCCA
TCACGCGACACGGCATCAACCGGGTGGACAACGGCCCGATGCTTCGGTCG
TCCTTCGAGGAGACGGTGGAGATCTTGATGGAGGCGGCGGTGTTCGCAGA
GGCCGACAACCTGAAGGGGGTCACGGACAACATTATGCTCGGGCAGGCGA
GTGTTTTCGTGGAACGGTTGTTGTTGTTGTTGGTGGTGGTAGTGGTGTCG
TTGTGGTTGTTTTGTTGTTGTGACGAACTCATGACTTTGGTTGTTGTTGT
TGTCATTAACCCGTAACTTTTCTGGAGGTGTTTGTCACTGATGTCACAAG
CTGATAGTTTTGTACTTGGCTACATCTCTACCCATACCCACCCTCATACC
ACGTCCCATGTAAACGTCTCAACCGCGCACACTGCACTCTCCGTCCCCCT
TTCACCCGGTCAACTAACCCCCCCTATTCAAACCCCATCCTTGTCCCTTT
CTGTGAACAGTTCGCTAACCTCGGTACCGGGACTATGGACCTCCTCCTCG
ACGAGAGCAAGCTGTCGCAGGCGATGGAACTCACCCAGCTCGACACCACC
ATGGCCCGTCTCAGCGGTGCCGCGGGGAGCGGCGCCGCCGGTGGGGCCGG
CGGTTACATGGGGACGCCGTCCATGACGCCCGCGGGGACACCGCATTTCA
CGCCAGGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14092:49..4059+

>mRNA_Ecto-sp13_S_contig14092.3198.1 ID=mRNA_Ecto-sp13_S_contig14092.3198.1|Name=mRNA_Ecto-sp13_S_contig14092.3198.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1359bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14092:49..4059+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGCGGCGTTCTGGCGGCCCAGTCGATCGGAGAGCCCATCACCCAGAT
GACGCTCAACACCTTCCACTTCGCCGGCGTTAGCGCGAAGAACGTTACCC
TGGGAGTGCCTCGAGTGAAGGAGATCATTAACGTGGCGAAGAACGTACGG
ACACCGTCCTTGACGATCTACCTGGAGGAAAGGGCTGCGGGGGCGGACGA
GGCGGAAGGACAGGAGGTCGCCAAGCGGGTGGTGGACATTCTGGAGTACG
TGACGCTGGGGGACATCACGACGTCGACCCAGATCTACTACGACCCGGAC
CCTCGATCTACGGTGGTGGACGAGGACGTGGAGCTGCTGGAGGGGCACTT
CGACATCCAGGAGGAGGAAGAAGACGACAAGGATACCGACAGAGCGAGGC
CGTGGCTGCTCCGCATGGAGCTCAACCGCGAGGCTGTGTTCGACAAGCGT
CTGGACGTCGTGGAGATCGCCAAGAGGGTTGTCGCTTACTTCGACGGGGG
GCTGCACGTCATCCGAAGCGACCAGAACTCGGAGAAGCTGGTGTTGCGGA
TACGCGTGCTAGACGATGTGCCCGACAAAATCGAGGCGGAGCCAGAGGCG
GAGGACACCGCGGAGGCCGACGATGTTGCGATGCTCAAGCACCTCGAGAA
GAACCTCCTCCGACTACAGCTGTCCGGTATCGCTGGTATCTCGAAGGTGT
ACATGTCCGAGGTTACCAAGCCGAGGTTCGACGAGATCAACGGCTTCGCG
CAGCGGCACAAGGAGTGGGTGCTAGAAACTGACGGCACGAACCTCATGGC
GGCGCTGTGCGCGGAGCAGATCGACCCCAGACGAACCGTGTCGAACGACG
TAGTGGAGTGCTGCACGGTGTTGGGCATCGAGGGCGCCAGAGGCTCACTT
CTCAAGGAGTTCCGAGCCGTGGTGGAGAGAGACGGTTCCTACGTAAACTA
CCGGCACCTGAGCACCCTGATCGACGTTATGACGTTCCGGGGCCACCTTA
TGGCCATCACGCGACACGGCATCAACCGGGTGGACAACGGCCCGATGCTT
CGGTCGTCCTTCGAGGAGACGGTGGAGATCTTGATGGAGGCGGCGGTGTT
CGCAGAGGCCGACAACCTGAAGGGGGTCACGGACAACATTATGCTCGGGC
AGGCGAGTTTCGCTAACCTCGGTACCGGGACTATGGACCTCCTCCTCGAC
GAGAGCAAGCTGTCGCAGGCGATGGAACTCACCCAGCTCGACACCACCAT
GGCCCGTCTCAGCGGTGCCGCGGGGAGCGGCGCCGCCGGTGGGGCCGGCG
GTTACATGGGGACGCCGTCCATGACGCCCGCGGGGACACCGCATTTCACG
CCAGGGTGA
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