prot_Ecto-sp13_S_contig14090.3197.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14090.3197.1
Unique Nameprot_Ecto-sp13_S_contig14090.3197.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length98
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14090.3197.1 vs. uniprot
Match: A0A6H5L6M1_9PHAE (UBA domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M1_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 7.880e-43
Identity = 94/100 (94.00%), Postives = 95/100 (95.00%), Query Frame = 0 
Query:    1 ILHVLLLLATGATEAQRRALVTSGFHVKLLELFKTTMEELRRARRADMKGESGD--GXXXXXXXXXAADWPEYMTPCLLLLDLVAKPSSTSQATDLGPQV 98
            ILHVLLLLATGATEAQRRALVT+GFHVKLLELFKTTM ELRRARRADMKGESGD   XXXXXXXXX ADWPEYMTPCLLLLDLVAKPSSTSQATDLGPQV
Sbjct:  676 ILHVLLLLATGATEAQRRALVTTGFHVKLLELFKTTMAELRRARRADMKGESGDCGXXXXXXXXXXTADWPEYMTPCLLLLDLVAKPSSTSQATDLGPQV 775
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14090.3197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L6M1_9PHAE7.880e-4394.00UBA domain-containing protein (Fragment) n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..98
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.649

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14090contigEcto-sp13_S_contig14090:984..1514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14090.3197.1mRNA_Ecto-sp13_S_contig14090.3197.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14090 984..1514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14090.3197.1 ID=prot_Ecto-sp13_S_contig14090.3197.1|Name=mRNA_Ecto-sp13_S_contig14090.3197.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=98bp
ILHVLLLLATGATEAQRRALVTSGFHVKLLELFKTTMEELRRARRADMKG
ESGDGGGGSPPPPPAADWPEYMTPCLLLLDLVAKPSSTSQATDLGPQV
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