prot_Ecto-sp13_S_contig14088.3195.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14088.3195.1
Unique Nameprot_Ecto-sp13_S_contig14088.3195.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length111
Homology
BLAST of mRNA_Ecto-sp13_S_contig14088.3195.1 vs. uniprot
Match: D7FXR7_ECTSI (S-adenosyl-methyltransferase MraW n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR7_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 5.170e-34
Identity = 69/80 (86.25%), Postives = 71/80 (88.75%), Query Frame = 0
Query:   36 VPPRTTSAGPLVDGILVDLGVSSHQIDDGARGFSFSADGPLDMRMEGTGDGDSMGERR----VAPTSKEHEDRAVENVGR 111
            VPPRTTSAGPLVDGILVDLGVSSHQIDD ARGFSFSADGPLDMRMEGTGDGDS+GER     VA TS+EHEDRAVE  GR
Sbjct:  108 VPPRTTSAGPLVDGILVDLGVSSHQIDDEARGFSFSADGPLDMRMEGTGDGDSVGERSGFGGVASTSREHEDRAVEKGGR 187          
BLAST of mRNA_Ecto-sp13_S_contig14088.3195.1 vs. uniprot
Match: A0A6H5J8S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8S8_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 8.880e-33
Identity = 69/79 (87.34%), Postives = 70/79 (88.61%), Query Frame = 0
Query:   37 PPRTTSAGPLVDGILVDLGVSSHQIDDGARGFSFSADGPLDMRMEGTGDGDSMGERR----VAPTSKEHEDRAVENVGR 111
            PPRTTSAGPLVDGILVDLGVSSHQIDDGARGFSFSADGPLDMRMEGTGDGDS GER     VAPTS +HEDRAVE  GR
Sbjct:  538 PPRTTSAGPLVDGILVDLGVSSHQIDDGARGFSFSADGPLDMRMEGTGDGDSAGERSWFGGVAPTSTKHEDRAVEKGGR 616          
BLAST of mRNA_Ecto-sp13_S_contig14088.3195.1 vs. uniprot
Match: A0A7S3XL64_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL64_HETAK)

HSP 1 Score: 70.1 bits (170), Expect = 9.180e-12
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 0
Query:   43 AGPLVDGILVDLGVSSHQIDDGARGFSFSADGPLDMRMEGTGDGDSM 89
            AGP + G+L+DLGVSSHQ+D+GARGFS++A+GPLDMRMEG G G  +
Sbjct:  204 AGPPLAGMLLDLGVSSHQLDEGARGFSYAAEGPLDMRMEGPGGGGGL 250          
BLAST of mRNA_Ecto-sp13_S_contig14088.3195.1 vs. uniprot
Match: A0A835Z182_9STRA (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z182_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.650e-10
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0
Query:   38 PRTTSAGPLVDGILVDLGVSSHQIDDGARGFSFSADGPLDMRMEG 82
            P+ +   P VDG+L+DLGVSSHQ+D  ARGFS+SADGPLDMRM G
Sbjct:  100 PQESMPPPQVDGMLLDLGVSSHQLDSAARGFSYSADGPLDMRMAG 144          
BLAST of mRNA_Ecto-sp13_S_contig14088.3195.1 vs. uniprot
Match: UPI001AC4F76F (Partial Ribosomal RNA small subunit methyltransferase H n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI001AC4F76F)

HSP 1 Score: 64.3 bits (155), Expect = 1.770e-10
Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 0
Query:   43 AGPLVDGILVDLGVSSHQIDDGARGFSFSADGPLDMRMEGT 83
            A P +DG+L+DLGVSS Q+DD ARGFSF ADGPLDMRM+ T
Sbjct:   90 AAPRIDGLLLDLGVSSPQLDDAARGFSFRADGPLDMRMDPT 130          
BLAST of mRNA_Ecto-sp13_S_contig14088.3195.1 vs. uniprot
Match: RSMH_ALCBS (Ribosomal RNA small subunit methyltransferase H n=7 Tax=Alcanivorax TaxID=59753 RepID=RSMH_ALCBS)

HSP 1 Score: 64.7 bits (156), Expect = 5.670e-10
Identity = 38/83 (45.78%), Postives = 47/83 (56.63%), Query Frame = 0
Query:    9 DPTAVAASPXXXXXXXXXXXXXXXXXXVPPRTTSAGPLVDGILVDLGVSSHQIDDGARGFSFSADGPLDMRMEGTGDGDSMGE 91
            DP A+AA                    +P     AG  +DG+L+DLGVSS Q+DD ARGFSF  DGPLDMRM+ T  G+S+ E
Sbjct:   60 DPQAIAAGQQLAASDSRFHMMAGRFDCLPQAVEQAGRPIDGLLLDLGVSSPQLDDAARGFSFLRDGPLDMRMDPT-QGESVAE 141          
BLAST of mRNA_Ecto-sp13_S_contig14088.3195.1 vs. uniprot
Match: A0A316P6P4_9FIRM (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A316P6P4_9FIRM)

HSP 1 Score: 64.3 bits (155), Expect = 7.810e-10
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:   45 PLVDGILVDLGVSSHQIDDGARGFSFSADGPLDMRMEGTG 84
            P VDGIL+D+GVSSHQ+D GARGFSF AD PLDMRM  +G
Sbjct:   92 PAVDGILLDIGVSSHQLDTGARGFSFHADAPLDMRMSQSG 131          
BLAST of mRNA_Ecto-sp13_S_contig14088.3195.1 vs. uniprot
Match: A0A7V7WQP3_9BURK (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7V7WQP3_9BURK)

HSP 1 Score: 64.3 bits (155), Expect = 7.990e-10
Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 0
Query:   43 AGPLVDGILVDLGVSSHQIDDGARGFSFSADGPLDMRMEGT 83
            A P +DG+L+DLGVSS Q+DD ARGFSF ADGPLDMRM+ T
Sbjct:   94 AAPRIDGLLLDLGVSSPQLDDAARGFSFRADGPLDMRMDPT 134          
BLAST of mRNA_Ecto-sp13_S_contig14088.3195.1 vs. uniprot
Match: A0A2E0UKR0_9GAMM (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Ectothiorhodospiraceae bacterium TaxID=2026737 RepID=A0A2E0UKR0_9GAMM)

HSP 1 Score: 64.3 bits (155), Expect = 8.190e-10
Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 0
Query:   47 VDGILVDLGVSSHQIDDGARGFSFSADGPLDMRME 81
            VDG+L+DLG+SSHQID+GARGFSF  DGPLDMRM+
Sbjct:  111 VDGVLLDLGISSHQIDEGARGFSFREDGPLDMRMD 145          
BLAST of mRNA_Ecto-sp13_S_contig14088.3195.1 vs. uniprot
Match: A0A2D9EZP7_9PROT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D9EZP7_9PROT)

HSP 1 Score: 64.3 bits (155), Expect = 8.230e-10
Identity = 36/58 (62.07%), Postives = 40/58 (68.97%), Query Frame = 0
Query:   47 VDGILVDLGVSSHQIDDGARGFSFSADGPLDMRMEGTG--DGDSMGERRVAPTSKEHE 102
            +DG+ +DLGVSS Q+DD ARGFSF ADGPLDMRMEG G    DSM    V  T  E E
Sbjct:   95 IDGVALDLGVSSMQLDDPARGFSFRADGPLDMRMEGDGRLSHDSMSAADVVNTLAEKE 152          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14088.3195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXR7_ECTSI5.170e-3486.25S-adenosyl-methyltransferase MraW n=1 Tax=Ectocarp... [more]
A0A6H5J8S8_9PHAE8.880e-3387.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XL64_HETAK9.180e-1268.09Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835Z182_9STRA1.650e-1068.89Ribosomal RNA small subunit methyltransferase H n=... [more]
UPI001AC4F76F1.770e-1073.17Partial Ribosomal RNA small subunit methyltransfer... [more]
RSMH_ALCBS5.670e-1045.78Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A316P6P4_9FIRM7.810e-1075.00Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A7V7WQP3_9BURK7.990e-1073.17Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A2E0UKR0_9GAMM8.190e-1080.00Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A2D9EZP7_9PROT8.230e-1062.07Ribosomal RNA small subunit methyltransferase H n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 25..111
e-value: 5.9E-9
score: 38.3
IPR002903Ribosomal RNA small subunit methyltransferase HPFAMPF01795Methyltransf_5coord: 46..83
e-value: 3.9E-14
score: 52.9
IPR002903Ribosomal RNA small subunit methyltransferase HPANTHERPTHR11265S-ADENOSYL-METHYLTRANSFERASE MRAWcoord: 45..83
IPR023397S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamilySUPERFAMILY81799Putative methyltransferase TM0872, insert domaincoord: 66..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14088contigEcto-sp13_S_contig14088:1009..1772 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14088.3195.1mRNA_Ecto-sp13_S_contig14088.3195.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14088 1009..1772 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14088.3195.1 ID=prot_Ecto-sp13_S_contig14088.3195.1|Name=mRNA_Ecto-sp13_S_contig14088.3195.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=111bp
SPTSRVSSDPTAVAASPAATTTPPAAAAAAATAAGVPPRTTSAGPLVDGI
LVDLGVSSHQIDDGARGFSFSADGPLDMRMEGTGDGDSMGERRVAPTSKE
HEDRAVENVGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002903RsmH
IPR023397SAM-dep_MeTrfase_MraW_recog