prot_Ecto-sp13_S_contig14078.3186.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig14078.3186.1
Unique Name	prot_Ecto-sp13_S_contig14078.3186.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	187

Homology

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BLAST of mRNA_Ecto-sp13_S_contig14078.3186.1 vs. uniprot
Match: D8LDY9_ECTSI (Channel voltage activated chloride channel (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY9_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 1.880e-122
Identity = 175/187 (93.58%), Postives = 177/187 (94.65%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDMHIHGNKLPFLEDECPSVARRNDMTASQAMSRRVRCLRPLERAGAVFDTLNACQHDCFPVVDDEGGDVLVGTILRKCLMLLLHQKAFGPVGTELGDGQQNSRSAARQQQGRGGGSANAYANASLGISPPISWGAMERIYPRYPTIESIDLSDAERRMWMD 187
            MQYVLPLMLTLMAARWVGNVFNEGLYDMHIHGNKLPFLEDECPSVAR+NDMTASQAMSRRVRCLRPLERAGAVFDTLNACQHDCFPVVDDEGGDVLVGTILRKCLMLLLHQKAFGPVGTELGDGQQNSRSAARQ QGR         +ASLGISPPISWGAMERIYPRYPTIESIDLSDAERRMWMD
Sbjct:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDMHIHGNKLPFLEDECPSVARQNDMTASQAMSRRVRCLRPLERAGAVFDTLNACQHDCFPVVDDEGGDVLVGTILRKCLMLLLHQKAFGPVGTELGDGQQNSRSAARQHQGRXXXXXXXXXDASLGISPPISWGAMERIYPRYPTIESIDLSDAERRMWMD 187

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BLAST of mRNA_Ecto-sp13_S_contig14078.3186.1 vs. uniprot
Match: A0A836CAG3_9STRA (Chloride channel protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAG3_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.720e-49
Identity = 89/187 (47.59%), Postives = 124/187 (66.31%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDMHIHGNKLPFLEDECPSVARRNDMTASQAMSRRVRCLRPLERAGAVFDTLNACQHDCFPVVDDEGGDVLVGTILRKCLMLLLHQKAFGPVGTELGDGQQNSRSAARQQQGRGGGSANAYANASLGISPPISWGAMERIYPRYPTIESIDLSDAERRMWMD 187
            MQYVLPLMLTLMAARW GNVFNEGLYD+HI   +LPFLEDE P++A + ++TA Q M+  V+CLRP+ER G V+D L   +HDCFPVVD + G+VL+GT+LRKCL +LL ++ F P           +R  +R ++                   P+++  +E+ YPRYPTI+ I +++ +R+ W+D
Sbjct:  452 MQYVLPLMLTLMAARWTGNVFNEGLYDIHIRLKRLPFLEDELPALAAKGEVTAGQIMTTTVKCLRPIERVGYVYDALRNTEHDCFPVVDTQTGNVLMGTVLRKCLCVLLQRRHFSP-----------NRGYSRGER-------------------PVTFETLEKDYPRYPTIQEITIANDDRQSWLD 608

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BLAST of mRNA_Ecto-sp13_S_contig14078.3186.1 vs. uniprot
Match: A0A7S1D5H2_CYCTE (Chloride channel protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5H2_CYCTE)

HSP 1 Score: 173 bits (438), Expect = 1.400e-48
Identity = 93/192 (48.44%), Postives = 117/192 (60.94%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDMHIHGNKLPFLEDECPSVARRNDMTASQAMSRRVRCLRPLERAGAVFDTLNACQHDCFPVVDDEGGDVLVGTILRKCLMLLLHQKAFGP--VGTELGDGQQNSRSAARQQQGRGGGSANAYANASLG---ISPPISWGAMERIYPRYPTIESIDLSDAERRMWMD 187
            MQYVLPLMLTLMAAR+ GNVFNEGLYD+HI    +PFLE E PS+A R+++ A Q MS  V+CLRP+ERAG V+D L +C H  FP+VD   G  L GT  R  L  LL ++AFGP  V TE                          A  SLG   +SP + W  +ER YPRYPT+++I++  A+R  W+D
Sbjct:  193 MQYVLPLMLTLMAARFTGNVFNEGLYDIHIKLKNIPFLEPEVPSIAERHEIVAGQVMSAEVKCLRPVERAGVVYDLLRSCSHGTFPIVDTASGGTLYGTASRSMLCTLLQRRAFGPPDVLTEYD------------------------ACESLGSRRLSPLVQWDTIERAYPRYPTVDTIEVRGADRNSWLD 360

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BLAST of mRNA_Ecto-sp13_S_contig14078.3186.1 vs. uniprot
Match: A0A7S2XUS9_9STRA (Chloride channel protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS9_9STRA)

HSP 1 Score: 174 bits (441), Expect = 6.080e-48
Identity = 86/187 (45.99%), Postives = 116/187 (62.03%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDMHIHGNKLPFLEDECPSVARRNDMTASQAMSRRVRCLRPLERAGAVFDTLNACQHDCFPVVDDEGGDVLVGTILRKCLMLLLHQKAFGPVGTELGDGQQNSRSAARQQQGRGGGSANAYANASLGISPPISWGAMERIYPRYPTIESIDLSDAERRMWMD 187
            MQYV+PLM+TLMAARWVGNVF   LY +HIH  +LP+LE++    AR NDM A+Q M + VRCLRP+E+ G ++D L + QH CFPVVD   G VLVG++LRK L +++ QKAFGP+  +    Q+                          +SP + WG +E +YPRYP  E + ++ AER  W+D
Sbjct:  382 MQYVVPLMITLMAARWVGNVFTPSLYHIHIHLKRLPYLEEDVDRPARMNDMIANQVMCKDVRCLRPVEKVGVIYDLLTSTQHHCFPVVDQGRGGVLVGSVLRKTLSVVIEQKAFGPMSVDHSSKQR--------------------------LSPLLQWGVLEGMYPRYPNPEDLIVTSAERECWID 542

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BLAST of mRNA_Ecto-sp13_S_contig14078.3186.1 vs. uniprot
Match: A0A1E7FXI3_9STRA (Chloride channel protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXI3_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.010e-46
Identity = 87/187 (46.52%), Postives = 115/187 (61.50%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDMHIHGNKLPFLEDECPSVARRNDMTASQAMSRRVRCLRPLERAGAVFDTLNACQHDCFPVVDDEGGDVLVGTILRKCLMLLLHQKAFGPVGTELGDGQQNSRSAARQQQGRGGGSANAYANASLGISPPISWGAMERIYPRYPTIESIDLSDAERRMWMD 187
            MQY LPLM+ LM+AR+ GNVFNEGLYD+HIH   +PF+E E P VA RN++ A Q MS  V+CLRP+ERAG V+D L +CQH  FP+VD   G  L GT  R  L  LL ++AFG    ++ D   NS +   ++                 +SP + W  +ER YPRYP I+ ID+ +A+R  W+D
Sbjct:  553 MQYTLPLMIVLMSARFTGNVFNEGLYDIHIHLKHIPFMEPEVPPVAERNEIVAGQVMSAEVKCLRPVERAGVVYDLLRSCQHGTFPIVDTASGGTLYGTASRDMLCTLLQRRAFG--NPDVLDDYDNSDTLGTRR-----------------LSPLVQWDTIERAYPRYPNIDDIDIGEADRNCWLD 720

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BLAST of mRNA_Ecto-sp13_S_contig14078.3186.1 vs. uniprot
Match: A0A7R9ZRT7_9STRA (Chloride channel protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRT7_9STRA)

HSP 1 Score: 162 bits (411), Expect = 5.070e-46
Identity = 86/191 (45.03%), Postives = 113/191 (59.16%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDMHIHGNKLPFLEDECPSVARRNDMTASQAMSRRVRCLRPLERAGAVFDTLNACQHDCFPVVDDEGGDVLVGTILRKCLMLLLHQKAFG-PVGTELGDGQQNSRSAARQQQGRGGGSANAYANASLG---ISPPISWGAMERIYPRYPTIESIDLSDAERRMWMD 187
            MQYVLPLML LM+AR+ GNVFNEGLYD+HIH   +PF+E E P +A R+++ A Q MS +V+CLRP+ERAG V+  L    H  FP+VD   G  L GT  R  L  LL ++AFG P   E  D                        N SLG   +SP + W  +ER YPRYPTI+ +D+ ++++  W+D
Sbjct:   76 MQYVLPLMLVLMSARFTGNVFNEGLYDIHIHLKHIPFMEPEVPPIAERHEIVAGQVMSTKVKCLRPVERAGLVYQLLKESSHGTFPIVDAASGGTLYGTASRAMLCTLLQRRAFGSPDVLEEDD-----------------------INGSLGPRRLSPLVQWDTIERAYPRYPTIDDVDMRESDQNCWLD 243

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BLAST of mRNA_Ecto-sp13_S_contig14078.3186.1 vs. uniprot
Match: A0A7S0UJS8_9STRA (Chloride channel protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UJS8_9STRA)

HSP 1 Score: 169 bits (429), Expect = 9.310e-46
Identity = 84/187 (44.92%), Postives = 117/187 (62.57%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDMHIHGNKLPFLEDECPSVARRNDMTASQAMSRRVRCLRPLERAGAVFDTLNACQHDCFPVVDDEGGDVLVGTILRKCLMLLLHQKAFGPVGTELGDGQQNSRSAARQQQGRGGGSANAYANASLGISPPISWGAMERIYPRYPTIESIDLSDAERRMWMD 187
            MQYVLPLM+ LM+AR+ GNVFNEGLYD+HIH   +PF+E E P++A RN++ A Q MS  V+CLRP+ERAG V+D L +CQH  FP+VD   G  L GT  R  L  LL ++AFG    ++ +   NS +   ++                 +SP + W  +ER YPRYP+I+  ++ +A+R  W+D
Sbjct:  497 MQYVLPLMIVLMSARFTGNVFNEGLYDIHIHLKHIPFMEPEVPTIAERNEIVAGQVMSAEVKCLRPVERAGVVYDLLRSCQHGTFPIVDTASGGTLYGTASRDMLCTLLQRRAFG--NPDVLEEYDNSDTLGPRR-----------------LSPLVQWDTIERAYPRYPSIDDFEIGEADRNCWLD 664

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BLAST of mRNA_Ecto-sp13_S_contig14078.3186.1 vs. uniprot
Match: A0A7S2YMG2_9STRA (Chloride channel protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMG2_9STRA)

HSP 1 Score: 169 bits (427), Expect = 1.760e-45
Identity = 89/187 (47.59%), Postives = 115/187 (61.50%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDMHIHGNKLPFLEDECPSVARRNDMTASQAMSRRVRCLRPLERAGAVFDTLNACQHDCFPVVDDEGGDVLVGTILRKCLMLLLHQKAFGPVGTELGDGQQNSRSAARQQQGRGGGSANAYANASLGISPPISWGAMERIYPRYPTIESIDLSDAERRMWMD 187
            MQYVLPLM+TLMAAR+ GNVFNEGLYD+HIH   +PFLE + PSVA RN++ + Q MS  V+CLRP+ERAG V+D L +C H  FP+VD   G  L GT  R  L  LL ++AFG     L D            QG   G           +SP + W  +E+ YP+YPT++ I++ DA+R  W+D
Sbjct:  491 MQYVLPLMITLMAARFTGNVFNEGLYDIHIHLKHIPFLEPDVPSVAERNEIVSGQVMSTEVKCLRPVERAGVVYDLLRSCSHGTFPIVDTASGGTLYGTASRYMLCTLLQRRAFGSPDV-LDD---------YHDQGHDLGPRR--------LSPLVQWDTIEKSYPKYPTVDEIEMRDADRDGWLD 659

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BLAST of mRNA_Ecto-sp13_S_contig14078.3186.1 vs. uniprot
Match: A0A1Z5JAK4_FISSO (Chloride channel protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAK4_FISSO)

HSP 1 Score: 166 bits (420), Expect = 2.870e-44
Identity = 87/190 (45.79%), Postives = 110/190 (57.89%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDMHIHGNKLPFLEDECPSVARRNDMTASQAMSRRVRCLRPLERAGAVFDTLNACQHDCFPVVDDEGGDVLVGTILRKCLMLLLHQKAFGPVGTELGDGQQNSRSAARQQQGRGGGSANAYANASLG---ISPPISWGAMERIYPRYPTIESIDLSDAERRMWMD 187
            MQYVLPLMLTLMAAR+ GNVFNEGLYD+HIH   +PFLE + P +A R+++ A Q MS  V+CLRP+ERAG V+D L  C H  FP+VD   G  L GT  R  L  LL ++AFG      GD                      Y   +LG   +SP + W  +E+ YPRYP I  + L + +R  W+D
Sbjct:  620 MQYVLPLMLTLMAARFTGNVFNEGLYDIHIHLKNIPFLEPDVPPIAERSEIVAGQVMSTEVKCLRPVERAGVVYDLLQQCGHGTFPIVDMASGGTLYGTASRYMLCTLLQRRAFGSPDVISGD----------------------YDGDTLGPRRLSPLVQWDTIEKAYPRYPRISDVHLREQDRNCWLD 787

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BLAST of mRNA_Ecto-sp13_S_contig14078.3186.1 vs. uniprot
Match: B8LCA7_THAPS (Chloride channel protein (Fragment) n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8LCA7_THAPS)

HSP 1 Score: 159 bits (402), Expect = 3.650e-42
Identity = 84/190 (44.21%), Postives = 109/190 (57.37%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDMHIHGNKLPFLEDECPSVARRNDMTASQAMSRRVRCLRPLERAGAVFDTLNACQHDCFPVVDD---EGGDVLVGTILRKCLMLLLHQKAFGPVGTELGDGQQNSRSAARQQQGRGGGSANAYANASLGISPPISWGAMERIYPRYPTIESIDLSDAERRMWMD 187
            MQYVLPLM+TLMAAR+ GNVFNEGLYD+HIH   +PFLE E P++A R+++ A Q MS  V+CLRP+ER G V+D L   QH  FP+VD         L GT  R  L  LL ++AFG     LG  +                           +SP + W  +ER+YPRYPTI+ ++L   +R  W+D
Sbjct:  468 MQYVLPLMMTLMAARFTGNVFNEGLYDIHIHLKHIPFLEPEVPTIAERHEIVAGQVMSTEVKCLRPVERVGIVYDLLKNVQHGNFPIVDTGELTSSGTLYGTASRSMLCTLLQRRAFGQPHDMLGPKR---------------------------LSPLVQWDTIERVYPRYPTIDDVELRPGDRNCWLD 630

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig14078.3186.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig14078.3186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LDY9_ECTSI	1.880e-122	93.58	Channel voltage activated chloride channel (Partia...	[more]
A0A836CAG3_9STRA	1.720e-49	47.59	Chloride channel protein n=1 Tax=Tribonema minus T...	[more]
A0A7S1D5H2_CYCTE	1.400e-48	48.44	Chloride channel protein n=1 Tax=Cyclophora tenuis...	[more]
A0A7S2XUS9_9STRA	6.080e-48	45.99	Chloride channel protein n=1 Tax=Fibrocapsa japoni...	[more]
A0A1E7FXI3_9STRA	1.010e-46	46.52	Chloride channel protein n=1 Tax=Fragilariopsis cy...	[more]
A0A7R9ZRT7_9STRA	5.070e-46	45.03	Chloride channel protein n=1 Tax=Craspedostauros a...	[more]
A0A7S0UJS8_9STRA	9.310e-46	44.92	Chloride channel protein n=1 Tax=Pseudo-nitzschia ...	[more]
A0A7S2YMG2_9STRA	1.760e-45	47.59	Chloride channel protein n=1 Tax=Amphiprora paludo...	[more]
A0A1Z5JAK4_FISSO	2.870e-44	45.79	Chloride channel protein n=2 Tax=Fistulifera solar...	[more]
B8LCA7_THAPS	3.650e-42	44.21	Chloride channel protein (Fragment) n=2 Tax=Thalas...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014743	Chloride channel, core	GENE3D	1.10.3080.10		coord: 1..39 e-value: 2.1E-8 score: 35.5
None	No IPR available	GENE3D	3.10.580.10		coord: 45..146 e-value: 1.1E-7 score: 33.8
None	No IPR available	PANTHER	PTHR11689:SF92	H(+)/CL(-) EXCHANGE TRANSPORTER 7	coord: 1..187
None	No IPR available	PANTHER	PTHR11689	CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER	coord: 1..187
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..22
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..187
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	SUPERFAMILY	54631	CBS-domain pair	coord: 47..114

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig14078	contig	Ecto-sp13_S_contig14078:1852..4053 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig14078.3186.1	mRNA_Ecto-sp13_S_contig14078.3186.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig14078 1852..4053 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig14078.3186.1 ID=prot_Ecto-sp13_S_contig14078.3186.1|Name=mRNA_Ecto-sp13_S_contig14078.3186.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=187bp
MQYVLPLMLTLMAARWVGNVFNEGLYDMHIHGNKLPFLEDECPSVARRND
MTASQAMSRRVRCLRPLERAGAVFDTLNACQHDCFPVVDDEGGDVLVGTI
LRKCLMLLLHQKAFGPVGTELGDGQQNSRSAARQQQGRGGGSANAYANAS
LGISPPISWGAMERIYPRYPTIESIDLSDAERRMWMD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014743	Cl-channel_core