prot_Ecto-sp13_S_contig14076.3184.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14076.3184.1
Unique Nameprot_Ecto-sp13_S_contig14076.3184.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length62
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14076.3184.1 vs. uniprot
Match: D8LFN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN7_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 1.120e-28
Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0 
Query:    1 MAVAHHQASVPFLESMRESVDEVLSGGSMADDVAIGAYLGMIEHAKSFKDVLCSKDMDVILS 62
            MAV  HQA+V FLESMRES+DEVLSG SMADDVA+GA+LGMIEHAKSFKDVLCSKD DVILS
Sbjct:    5 MAVVDHQANVCFLESMRESIDEVLSGSSMADDVALGAHLGMIEHAKSFKDVLCSKDTDVILS 66
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BLAST of mRNA_Ecto-sp13_S_contig14076.3184.1 vs. uniprot
Match: A0A6H5JIG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG7_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 2.410e-17
Identity = 43/61 (70.49%), Postives = 49/61 (80.33%), Query Frame = 0 
Query:    1 MAVAHHQASVPFLESMRESVDEVLSGGSMADDVAIGAYLGMIEHAKSFKDVLCSKDMDVIL 61
            MA A  QA+V FLE MRES+D VLS GSMAD V + A LG+I+HAKSFKDVLCS+D DVIL
Sbjct:    1 MAFADQQANVRFLERMRESIDGVLSDGSMADGVELEACLGIIQHAKSFKDVLCSEDTDVIL 61
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BLAST of mRNA_Ecto-sp13_S_contig14076.3184.1 vs. uniprot
Match: A0A6H5JS69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS69_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 7.570e-12
Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 0 
Query:    2 AVAHHQASVPFLESMRESVDEVLSGGSMADDVAIGAYLGMIEHAKSFKDVLCSKDMDVIL 61
            A+A  QA++ FLE +RES+D VLS GS+ D VA+GA   MIE+A+SFK VL S+D DVIL
Sbjct:    8 ALADDQANLRFLERVRESIDVVLSSGSVEDGVALGACSEMIEYARSFKHVLGSQDTDVIL 67
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14076.3184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LFN7_ECTSI1.120e-2885.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIG7_9PHAE2.410e-1770.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JS69_9PHAE7.570e-1260.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14076contigEcto-sp13_S_contig14076:4292..4477 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14076.3184.1mRNA_Ecto-sp13_S_contig14076.3184.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14076 4283..4477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14076.3184.1 ID=prot_Ecto-sp13_S_contig14076.3184.1|Name=mRNA_Ecto-sp13_S_contig14076.3184.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp
MAVAHHQASVPFLESMRESVDEVLSGGSMADDVAIGAYLGMIEHAKSFKD
VLCSKDMDVILS
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