prot_Ecto-sp13_S_contig1407.3177.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1407.3177.1
Unique Nameprot_Ecto-sp13_S_contig1407.3177.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length190
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1407.3177.1 vs. uniprot
Match: D8LN49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN49_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 1.500e-117
Identity = 174/195 (89.23%), Postives = 181/195 (92.82%), Query Frame = 0 
Query:    2 WLTLLIGHILV-------TVCPHSKRHSGAQFVEGVLEDSGLNMPLVLLNDGYGSESFKQVDEIRRFVGRSERARLDLLASPRTFAELRSFAAKLADPASRLRTLREEVEQMEASLWHRNMWMACHVVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKELTNKKEEIELDIVDEQELRAAQGVSAFLDYMCA 189
            WLT+L GH+L        TV P +KRH+GAQFVEGVLEDSGLNMPLVLLNDGYGSESFKQVDEIRRFVGRSERARLD LASPRTFAELRSFAAKLADPASRLRTLREEVEQMEASLWHR++WMACHVVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKEL +KKEEIELDIVDEQEL AAQGVSAFLDYMCA
Sbjct:    2 WLTILTGHLLALFVLYPTTVRPCTKRHAGAQFVEGVLEDSGLNMPLVLLNDGYGSESFKQVDEIRRFVGRSERARLDPLASPRTFAELRSFAAKLADPASRLRTLREEVEQMEASLWHRSLWMACHVVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKELNDKKEEIELDIVDEQELCAAQGVSAFLDYMCA 196
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BLAST of mRNA_Ecto-sp13_S_contig1407.3177.1 vs. uniprot
Match: A0A6H5JSX4_9PHAE (G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSX4_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 7.980e-106
Identity = 159/171 (92.98%), Postives = 166/171 (97.08%), Query Frame = 0 
Query:   19 KRHSGAQFVEGVLEDSGLNMPLVLLNDGYGSESFKQVDEIRRFVGRSERARLDLLASPRTFAELRSFAAKLADPASRLRTLREEVEQMEASLWHRNMWMACHVVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKELTNKKEEIELDIVDEQELRAAQGVSAFLDYMCA 189
            +RHSGAQFVEGVL+DSGLNMPLVLLNDGYGSES KQVDEIRRFVGRSERARLDL+AS RTFAELRSFAAKLADPASRLRT+REEVEQMEASLWHR++WMAC VVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKEL +KKEEIELDIVDEQELRAAQGV AFLDYMCA
Sbjct:  170 RRHSGAQFVEGVLDDSGLNMPLVLLNDGYGSESIKQVDEIRRFVGRSERARLDLVASLRTFAELRSFAAKLADPASRLRTVREEVEQMEASLWHRSLWMACQVVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKELNDKKEEIELDIVDEQELRAAQGVLAFLDYMCA 340
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1407.3177.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN49_ECTSI1.500e-11789.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSX4_9PHAE7.980e-10692.98G domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 143..174
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.536

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1407contigEcto-sp13_S_contig1407:5824..6615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1407.3177.1mRNA_Ecto-sp13_S_contig1407.3177.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1407 5824..6615 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1407.3177.1 ID=prot_Ecto-sp13_S_contig1407.3177.1|Name=mRNA_Ecto-sp13_S_contig1407.3177.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=190bp
IWLTLLIGHILVTVCPHSKRHSGAQFVEGVLEDSGLNMPLVLLNDGYGSE
SFKQVDEIRRFVGRSERARLDLLASPRTFAELRSFAAKLADPASRLRTLR
EEVEQMEASLWHRNMWMACHVVPLAYISVSSPGAGCIWTGPYVKREQEAC
ARLRKELTNKKEEIELDIVDEQELRAAQGVSAFLDYMCA*
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