mRNA_Ecto-sp13_S_contig1406.3166.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1406.3166.1 vs. uniprot
Match: A0A6H5JXI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXI7_9PHAE) HSP 1 Score: 297 bits (761), Expect = 7.530e-98 Identity = 159/189 (84.13%), Postives = 164/189 (86.77%), Query Frame = 1
Query: 532 GEVLEDAETDTAXXXXXXXXXAAPYLLDLAGELSFVPHTWLLPRCRGVVHHGGSGTTGACLSAGAVQVVIPLAWDQFFFADQVEYMGVGVRVLGTRPPQKPPTTREISSDRSAGHAVGSAXXXXXXXVAPIEAGAMDNAVRLALSEGMKTSAGRYREIVLQEAESGVEATAATIVAELGQTPTAAIGRI 1098
GEVLE+AET+TA AAPYLLDLAGE SFVPHTWLLPRCRGVVHHGGSGTTGACLSAGAVQVVIPLAWDQFFFADQVE+MGVGVRVLGTRPPQK PTTRE DRSAGHA+GS VAPIEAGAMDNAVRLALSEGMKTSA RYREIVLQEAESGVE TA+TIVAEL QTPTAAIGRI
Sbjct: 2 GEVLENAETETAATVAAVA--AAPYLLDLAGEQSFVPHTWLLPRCRGVVHHGGSGTTGACLSAGAVQVVIPLAWDQFFFADQVEHMGVGVRVLGTRPPQKQPTTREHYLDRSAGHAMGSITTTTTTTVAPIEAGAMDNAVRLALSEGMKTSACRYREIVLQEAESGVETTASTIVAELRQTPTAAIGRI 188
BLAST of mRNA_Ecto-sp13_S_contig1406.3166.1 vs. uniprot
Match: A0A835XV57_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XV57_9CHLO) HSP 1 Score: 107 bits (266), Expect = 1.280e-21 Identity = 97/323 (30.03%), Postives = 129/323 (39.94%), Query Frame = 1
Query: 7 LPRAPPILFGVSPAVLPRPGYWPAQADVCGFWSFPR---LSPRYQPPDRLVRFLARCEAD--------NKPVFVVGLGSMPALGLVQDPSRIVATAASSLQRAGAAVVLLPTPQAP--------------------------------------------AQLKDHDGNVCQSVATSAAVGAAAKGDRLAPSAPRGNGSTRGQQKEMVAAAGGGDIAEGTTCRRDQGGCCGEVLEDAETDTAXXXXXXXXXAAPYLLDLAGELSFVPHTWLLPRCRGVVHHGGSGTTGACLSAGAVQVVIPLAWDQFFFADQVEYMGVGVRVL 810
LP APP+L+G S V+PRP YWP +CGFW P R PP L FLA AD V LGSM LGL+ DP R++ ++L G ++L P A+++ G S A + RL P+ P G T G + E++ AA G + + G + + + + + L L G VPHT LLPRC V+HHGGSGTT A L G QV P +DQ F+A++V YMG+G L
Sbjct: 294 LPPAPPLLYGFSERVVPRPPYWPPSVTLCGFWQPPLGWFEGERLTPP--LESFLAAAAADPSCARLGLRSTCVCVDLGSMGRLGLIPDPPRLLRVLEAALAEVGLVGLMLTAGWEPLHAAAAAAXXTSAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAEVEGLAGPAAPSSEEQEQPRAGKRTRRLGPADPPG---TAGSEAEVLDAANPGSLGPSDS----SGPQDPAAVPNPNVNPSSMSSAAAAATSHPRLFLQGR--DVPHTLLLPRCAAVLHHGGSGTTAAALLCGVPQVTCPCQFDQPFWAERVAYMGLGPEPL 605
BLAST of mRNA_Ecto-sp13_S_contig1406.3166.1 vs. uniprot
Match: A0A511MY20_9DEIO (Glyco_transf_28 domain-containing protein n=1 Tax=Deinococcus cellulosilyticus NBRC 106333 = KACC 11606 TaxID=1223518 RepID=A0A511MY20_9DEIO) HSP 1 Score: 85.9 bits (211), Expect = 8.320e-15 Identity = 75/260 (28.85%), Postives = 101/260 (38.85%), Query Frame = 1
Query: 19 PPILFGVSPAVLPRPGYWPAQADVCGFWSFPRLSPRYQPPDRLVRFLARCEADNKPVFVVGLGSMPALGLVQDPSRIVATAASSLQRAGAAVVLLPTPQAPAQLKDHDGNVCQSVATSAAVGAAAKGDRLAPSAPRGNGSTRGQQKEMVAAAGGGDIAEGTTCRRDQGGCCGEVLEDAETDTAXXXXXXXXXAAPYLLDLAGELSFVPHTWLLPRCRGVVHHGGSGTTGACLSAGAVQVVIPLAWDQFFFADQVEYMGVG 798
PP+L+G+SP VLPRP WP+ + GFW +P +QPP L FL ++ P++V G GSM +DP + +LQ +G VLL K G V +GD P + L+G VPH+WL PR R VVHHGG+GTT A L AG V+P DQ F+ ++V+ +GVG
Sbjct: 205 PPVLYGISPHVLPRPADWPSHIHMTGFWFLD--APSWQPPAELQNFL---DSGPTPIYV-GFGSMGN----RDPEQTADLVLEALQTSGQRAVLL---------KGWGGMV--------------RGD-----------------------------------------------------------------LPDFVHLSGS---VPHSWLFPRMRAVVHHGGAGTTAAGLGAGVPSQVVPFFGDQPFWGNRVQMLGVG 363
BLAST of mRNA_Ecto-sp13_S_contig1406.3166.1 vs. uniprot
Match: A9SX27_PHYPA (Predicted protein n=8 Tax=Physcomitrium patens TaxID=3218 RepID=A9SX27_PHYPA) HSP 1 Score: 84.3 bits (207), Expect = 3.670e-14 Identity = 70/277 (25.27%), Postives = 116/277 (41.88%), Query Frame = 1
Query: 10 PRAPPILFGVSPAVLPRPGYWPAQADVCGFWSFPR---LSPRYQPP-DRLVRFLARCE------ADNKPVFVVGLGSMPALGLVQDPSRIVATAASSLQRAGAAVVLLPTPQAPAQLKDHDGNVCQSVATSAAVGAAAKGDRLAPSAPRGNGSTRGQQKEMVAAAGGGDIAEGTTCRRDQGGCCGEVLEDAETDTAXXXXXXXXXAAPYLLDLAGELSFVPHTWLLPRCRGVVHHGGSGTTGACLSAGAVQVVIPLAWDQFFFADQVEYMGVGVRVL 810
P+AP +L+G S V+ P YWP+ VCGFW P ++P P L FL+ + D++P+F+ G S +G ++ P ++ + L+ ++ +L P L+ + +C ++ + A +QK + + EG C + L +G VP+ WLLP C +HHGGSGTT ACL AG Q++ P DQF++A+++ ++ V + L
Sbjct: 229 PQAPHLLYGFSSQVVECPAYWPSSISVCGFWFTPLEWDVAPEVNPGLSVLGHFLSEHKFDESENKDDRPIFL-GFSSTGNMGFLERPGSMLKVLKAVLEATDSSAILFTAGHPPLDLEVTE--LCDENLSTQYLEA--------------------EQKRNL-------LQEGLCCFNGR-----------------------------LFCYSGS---VPYLWLLPHCSVAIHHGGSGTTAACLRAGTPQIICPFVLDQFYWAERMTWLRVAPQSL 443
BLAST of mRNA_Ecto-sp13_S_contig1406.3166.1 vs. uniprot
Match: A0A1F8SS03_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium RBG_19FT_COMBO_55_16 TaxID=1797669 RepID=A0A1F8SS03_9CHLR) HSP 1 Score: 73.9 bits (180), Expect = 3.630e-12 Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 637 VPHTWLLPRCRGVVHHGGSGTTGACLSAGAVQVVIPLAWDQFFFADQVEYMGVGV 801
+PH+WLLP C GVVHHGG GTT A L AG Q+VIP DQF++ +V+ +GVG+
Sbjct: 50 LPHSWLLPHCAGVVHHGGFGTTAAGLRAGVPQLVIPHIADQFYWGQRVDQLGVGL 104
BLAST of mRNA_Ecto-sp13_S_contig1406.3166.1 vs. uniprot
Match: A0A7S2MA15_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2MA15_9DINO) HSP 1 Score: 73.9 bits (180), Expect = 6.470e-12 Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 640 PHTWLLPRCRGVVHHGGSGTTGACLSAGAVQVVIPLAWDQFFFADQVEYMGVGVRV 807
PH WLLPRC +HHGG+GTT A AG + P AWDQ ++A++VE +GVG+ V
Sbjct: 11 PHGWLLPRCAAALHHGGAGTTAAAARAGVPMAIAPFAWDQPWWAERVEKLGVGIAV 66
BLAST of mRNA_Ecto-sp13_S_contig1406.3166.1 vs. uniprot
Match: A0A7C4PE39_9CHLR (Glycosyltransferase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C4PE39_9CHLR) HSP 1 Score: 76.6 bits (187), Expect = 9.860e-12 Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 628 LSFVPHTWLLPRCRGVVHHGGSGTTGACLSAGAVQVVIPLAWDQFFFADQVEYMGVGVRVLGTR 819
L VPH WLLPRC+ VVHHGG+G TGA L AG +V+P A DQFF+ QV +G G + R
Sbjct: 303 LESVPHDWLLPRCKAVVHHGGAGVTGAGLRAGISNIVVPHAGDQFFWGHQVMRLGAGPAPIPVR 366
BLAST of mRNA_Ecto-sp13_S_contig1406.3166.1 vs. uniprot
Match: A0A4D9D373_9STRA (Methyltransf_21 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D373_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.160e-11 Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 637 VPHTWLLPRCRGVVHHGGSGTTGACLSAGAVQVVIPLAWDQFFFADQVEYMGVGVRVLG 813
VPH+WLLP+C +VHHGGSGTT A L AG QVV+P DQF +A +V +G+G LG
Sbjct: 201 VPHSWLLPQCSAIVHHGGSGTTAAALRAGIAQVVVPGMMDQFLWAKRVASLGLGPSPLG 259
BLAST of mRNA_Ecto-sp13_S_contig1406.3166.1 vs. uniprot
Match: A0A7S1MDH1_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MDH1_ALECA) HSP 1 Score: 76.3 bits (186), Expect = 1.250e-11 Identity = 49/134 (36.57%), Postives = 67/134 (50.00%), Query Frame = 1
Query: 628 LSFVPHTWLLPRCRGVVHHGGSGTTGACLSAGAVQVVIPLAWDQFFFADQVEYMGVGVRVLGTRPPQKPPTTREISSDRSAGHAVGSAXXXXXXXVAPIEAGAMDNAVRLALSEGMKTSAGRYREIVLQEAESG 1029
L + PH WL+PRC VVHHGG GTT A L +G VV P+++DQ ++A++VE +GVGV T K S+ RS G P+ A + A RL +G + +A V +E SG
Sbjct: 141 LQWAPHEWLMPRCDVVVHHGGCGTTAASLRSGRPTVVTPVSFDQRYWAERVEKLGVGV---ATEQLAKAGAQSIASAVRSCGWE-------------PVRRRAEELAARLRAEDGARNAAALLAAYVEKEVRSG 258
BLAST of mRNA_Ecto-sp13_S_contig1406.3166.1 vs. uniprot
Match: A0A8J4BMZ3_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BMZ3_9CHLO) HSP 1 Score: 77.0 bits (188), Expect = 1.310e-11 Identity = 83/301 (27.57%), Postives = 114/301 (37.87%), Query Frame = 1
Query: 7 LPRAPPILFGVSPAVLPRPGYWPAQADVCGFWSFP-RLSPRYQPPDRLVRFL----ARCEAD------NKPVF------------VVGLGSMPALGLVQDPSRIVATAASSLQRAGAAVVLL-----PTPQAPAQLKDHDGNVCQSVATSAAVGAAAKGDRLAPSAPRGNGSTRGQQKEMVAAAGGGDIAEGTTCRRDQG--GCCGEVLEDAETDTAXXXXXXXXXAAPYLLDLAGELSFVPHTWLLPRCRGVVHHGGSGTTGACLSAGAVQVVIPLAWDQFFFADQVEYMGVGVRVLGTR 819
LP APP+L+G S V+PRP YWP CGFW P Q P L L A AD P+ +V GS +G + P + + L+R +LL P A A+L + + + PS +Q ++ G G D G ++L + D + L G VPH +LP CR V+HHGGSGTT A L G QV P+ +DQ F+A++ ++GVG L R
Sbjct: 461 LPPAPPLLYGFSELVVPRPPYWPHSVTACGFWQPPLEWFAGQQLPTDLAEVLGSAVAPAAADMTTPAVRSPLMAPPLSTTEPGLCLVDFGSCGRMGFIPAPLDTLTLLDAVLRRLDMKAILLTGGWQPFHLAAAELNKNRSRRVHQLQRQQLEKQELPQQQPGPSXXXXXXXXXXEQPHLL---GRGKRRLELELELDAGVEAAAEQLLSEENGDLKPAQLPIQPQPQLSHIHLYG--GNVPHQLVLPYCRLVLHHGGSGTTAAALQCGTPQVTCPVHFDQHFWAERTAHLGVGSAPLDRR 756 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1406.3166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1406.3166.1 >prot_Ecto-sp13_S_contig1406.3166.1 ID=prot_Ecto-sp13_S_contig1406.3166.1|Name=mRNA_Ecto-sp13_S_contig1406.3166.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=367bp SSLPRAPPILFGVSPAVLPRPGYWPAQADVCGFWSFPRLSPRYQPPDRLVback to top mRNA from alignment at Ecto-sp13_S_contig1406:12169..17280- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1406.3166.1 ID=mRNA_Ecto-sp13_S_contig1406.3166.1|Name=mRNA_Ecto-sp13_S_contig1406.3166.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5112bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1406:12169..17280- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1406:12169..17280- >mRNA_Ecto-sp13_S_contig1406.3166.1 ID=mRNA_Ecto-sp13_S_contig1406.3166.1|Name=mRNA_Ecto-sp13_S_contig1406.3166.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1101bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1406:12169..17280- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |