prot_Ecto-sp13_S_contig1406.3165.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1406.3165.1
Unique Nameprot_Ecto-sp13_S_contig1406.3165.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length145
Homology
BLAST of mRNA_Ecto-sp13_S_contig1406.3165.1 vs. uniprot
Match: A0A6H5JL03_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL03_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 5.690e-55
Identity = 100/112 (89.29%), Postives = 103/112 (91.96%), Query Frame = 0
Query:   33 GEKTIQKSFFFFSIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNMRMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKET 144
            G+ T ++      IRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVN RMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKET
Sbjct:  182 GKLTPEQHVRIQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNKRMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKET 293          
BLAST of mRNA_Ecto-sp13_S_contig1406.3165.1 vs. uniprot
Match: A0A835YY22_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY22_9STRA)

HSP 1 Score: 129 bits (325), Expect = 4.300e-34
Identity = 64/98 (65.31%), Postives = 86/98 (87.76%), Query Frame = 0
Query:   46 IRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNMRMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKE 143
            IR+R KEME+ YL+ +EEHVDRLG++A+ + EEL +Q+RM+DDLGNRI++ QE +ANVN+RMK+ LK VR+ADKFC+DIMC+LL+LG+ AVLYAV+K 
Sbjct:  197 IRERSKEMENTYLSKIEEHVDRLGDLARGMGEELVLQERMLDDLGNRIESTQEKLANVNVRMKDTLKKVRAADKFCVDIMCVLLMLGLAAVLYAVIKN 294          
BLAST of mRNA_Ecto-sp13_S_contig1406.3165.1 vs. uniprot
Match: A0A7S2UZ99_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ99_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.390e-20
Identity = 44/96 (45.83%), Postives = 70/96 (72.92%), Query Frame = 0
Query:   49 RKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNMRMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKET 144
            R K+M+D++LT + E VD + E+A    EE+++Q  M+D+LGNRID A  H  +VN ++KE LK VR ADK CMDI+CI++++ M+ ++Y++ K +
Sbjct:   21 RDKQMDDEHLTKIGEAVDDIKEIALAANEEVKLQSVMIDNLGNRIDIANTHAESVNTKLKETLKKVRGADKLCMDIICIVIMVAMVGIIYSLYKNS 116          
BLAST of mRNA_Ecto-sp13_S_contig1406.3165.1 vs. uniprot
Match: A0A7S2RAR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAR9_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 5.740e-17
Identity = 40/89 (44.94%), Postives = 65/89 (73.03%), Query Frame = 0
Query:   55 DKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNMRMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKE 143
            DK + ++ E V+ LG +AK + EELQ+Q +M+D+L   ++ AQEHV+N+N ++ + LK VR +DK C+DI+C+LLLLG+I V+  + + 
Sbjct:  224 DKTIELIGERVEDLGGIAKQMNEELQVQSKMIDELDQAVEKAQEHVSNINAQVADTLKKVRDSDKLCIDILCLLLLLGLIGVMIQLARS 312          
BLAST of mRNA_Ecto-sp13_S_contig1406.3165.1 vs. uniprot
Match: A0A7S3XQY8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQY8_HETAK)

HSP 1 Score: 76.6 bits (187), Expect = 3.440e-15
Identity = 38/98 (38.78%), Postives = 67/98 (68.37%), Query Frame = 0
Query:   46 IRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNMRMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKE 143
            ++ R +E + ++LT +E+ V+   E+A    EE++ Q  ++D L ++++   EH    N R+K+V+K VR ADKFCMDI C++L+LGM+ +LY++ +E
Sbjct:   28 LQQRDREQDAEHLTRIEQGVEDALEIALVANEEVKRQGVLLDQLDDKLEAVTEHADTTNRRLKDVIKQVRGADKFCMDIFCVVLMLGMLGILYSLARE 125          
BLAST of mRNA_Ecto-sp13_S_contig1406.3165.1 vs. uniprot
Match: A0A7S2Q5H6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q5H6_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.710e-13
Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 0
Query:   25 GXXXXAHRGEKTIQKSFFFFSIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNMRMKEVLKNV-RSADKFCMDIMCILLLLGMIAVLY 138
            G    A  G + +Q       IRDR  E  D+ L  + E +  L E+A    EE++ Q++M+ ++G++ID A EH+ NVN +MK+ L  V RS+DK C+DIMCI+L +G+IAV+Y
Sbjct:   31 GTTGVAMTGSQQVQLQ----QIRDRDAEF-DQDLDEIGEGIQDLHELALRQGEEVKRQNQMLQEVGSKIDNAHEHMINVNAKMKDTLNEVGRSSDKLCVDIMCIVLGIGLIAVIY 140          
BLAST of mRNA_Ecto-sp13_S_contig1406.3165.1 vs. uniprot
Match: A0A7S3PYZ1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYZ1_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 6.430e-13
Identity = 45/110 (40.91%), Postives = 66/110 (60.00%), Query Frame = 0
Query:   34 EKTIQKSFFFFSIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNMRMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKE 143
            E T Q+      I DR KE  D+ L  + E +  L E+A         Q+ M  ++G +ID AQEH++ VN +MK+ L  VR+ADK C+D+MCI+L++GM AVLY ++  
Sbjct:  226 ELTQQQHLQLQQINDRDKEF-DQELDQIGEGIQDLSELAXXXXXXXXRQNVMXXNVGQKIDDAQEHLSTVNTKMKDTLNEVRAADKICVDVMCIVLMVGMAAVLYKMIAS 334          
BLAST of mRNA_Ecto-sp13_S_contig1406.3165.1 vs. uniprot
Match: K3WTN0_GLOUD (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTN0_GLOUD)

HSP 1 Score: 73.6 bits (179), Expect = 1.010e-12
Identity = 40/75 (53.33%), Postives = 56/75 (74.67%), Query Frame = 0
Query:   65 VDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNMRMKEVLKNV-RSADKFCMDIMCILLLLGMIAVLY 138
            V  LG++A+ + EELQ Q  M+D L  RIDT Q HV +VNM+MK+ L+ V RSADK  MD++C++LLLG++ V+Y
Sbjct:  228 VQELGQLARGLNEELQQQSIMIDGLEERIDTTQAHVESVNMKMKKTLEKVGRSADKCMMDMICLILLLGILTVVY 302          
BLAST of mRNA_Ecto-sp13_S_contig1406.3165.1 vs. uniprot
Match: B8LD27_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD27_THAPS)

HSP 1 Score: 72.8 bits (177), Expect = 2.650e-12
Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 0
Query:   46 IRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNMRMKEVLKNV-RSADKFCMDIMCILLLLGMIAVLY 138
            IRDR  E  D+ L  + E +  L E+A+   EE+Q Q+ M++ +GN+ID A EH+ NVN +MK+ L  V RS+DK C+DIMCILL +G  AV Y
Sbjct:  268 IRDRDAEF-DQDLDQIGEGIQDLHELAQRQGEEVQRQNVMLNQVGNKIDNAHEHMVNVNAKMKDTLNEVGRSSDKLCVDIMCILLAVGFGAVFY 360          
BLAST of mRNA_Ecto-sp13_S_contig1406.3165.1 vs. uniprot
Match: A0A7S0BZ32_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BZ32_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.370e-12
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 0
Query:   55 DKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNMRMKEVLKNV-RSADKFCMDIMCILLLLGMIAVLYAVVKET 144
            D+ L ++ + +  L E+A    EE++ Q+ M++ +G +ID   +H+ NVN RMKE L  V RSADK C+DIMCI L LG  AV Y ++K T
Sbjct:  209 DQDLDIIGQGIQDLSEIAALQGEEVKRQNVMLESVGKKIDNVNDHLGNVNSRMKETLDEVGRSADKLCVDIMCIALALGFAAVFYRIIKAT 299          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1406.3165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL03_9PHAE5.690e-5589.29t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835YY22_9STRA4.300e-3465.31Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2UZ99_9STRA1.390e-2045.83Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RAR9_9STRA5.740e-1744.94Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3XQY8_HETAK3.440e-1538.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Q5H6_9STRA1.710e-1341.74Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3PYZ1_9STRA6.430e-1340.91Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
K3WTN0_GLOUD1.010e-1253.33t-SNARE coiled-coil homology domain-containing pro... [more]
B8LD27_THAPS2.650e-1248.94Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S0BZ32_9STRA3.370e-1245.05Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..92
NoneNo IPR availableGENE3D1.20.5.110coord: 55..117
e-value: 5.3E-13
score: 50.7
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 58..136
NoneNo IPR availablePANTHERPTHR19957:SF258coord: 58..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 142..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..141
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 43..110
NoneNo IPR availableTMHMMTMhelixcoord: 124..141
IPR000727Target SNARE coiled-coil homology domainPFAMPF05739SNAREcoord: 84..135
e-value: 6.5E-8
score: 32.5
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 48..110
score: 10.835

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1406contigEcto-sp13_S_contig1406:1293..2803 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1406.3165.1mRNA_Ecto-sp13_S_contig1406.3165.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1406 1293..4829 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1406.3165.1 ID=prot_Ecto-sp13_S_contig1406.3165.1|Name=mRNA_Ecto-sp13_S_contig1406.3165.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp
GGGGGGGGGDPRPQKGGGGKVPPGGXXXXAHRGEKTIQKSFFFFSIRDRK
KEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHV
ANVNMRMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom