prot_Ecto-sp13_S_contig14050.3162.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14050.3162.1
Unique Nameprot_Ecto-sp13_S_contig14050.3162.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length128
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14050.3162.1 vs. uniprot
Match: D8LHQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ6_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 2.970e-64
Identity = 117/128 (91.41%), Postives = 119/128 (92.97%), Query Frame = 0 
Query:    1 DAQARDAETRWVAPWMVGLVDRFPGGAAGPRGRGGWDAGRVGLVGSEECEAGLLRGASDGGALHSRGPDGSDMDICSAVSSHGSSVKSPEGAAGDGGAAXXXXGGGLSDLHHEILRFEEYVSLTPAEV 128
            DA+ARDA TRWVAPWMVGLVDRFPGGAAGPRGRGG DAGRVGLVGSEE EAGLLRGASDGGALHSRGPDGSDMDIC A SSHGSSVK PEGAAGDGGA XXXX  GLSDLHHEILRFE+YVSLTPAEV
Sbjct:  276 DARARDAGTRWVAPWMVGLVDRFPGGAAGPRGRGGRDAGRVGLVGSEEGEAGLLRGASDGGALHSRGPDGSDMDICGAGSSHGSSVKGPEGAAGDGGAEXXXXXXGLSDLHHEILRFEDYVSLTPAEV 403
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BLAST of mRNA_Ecto-sp13_S_contig14050.3162.1 vs. uniprot
Match: A0A6H5JXD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXD9_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 1.830e-58
Identity = 107/128 (83.59%), Postives = 111/128 (86.72%), Query Frame = 0 
Query:    1 DAQARDAETRWVAPWMVGLVDRFPGGAAGPRGRGGWDAGRVGLVGSEECEAGLLRGASDGGALHSRGPDGSDMDICSAVSSHGSSVKSPEGAAGDGGAAXXXXGGGLSDLHHEILRFEEYVSLTPAEV 128
            DA+ARDAETRWVAPWMVGLVDRFPGGAAGPRGRGG DAGRVGLVGSEE EAGLLRGASDGGAL SRG DGS++DI  A SSHGSSVKSPEGA  DGGA       G SDLHHEILRFE+YVSLTPAEV
Sbjct:  328 DARARDAETRWVAPWMVGLVDRFPGGAAGPRGRGGRDAGRVGLVGSEEGEAGLLRGASDGGALQSRGRDGSNVDIHGAGSSHGSSVKSPEGATRDGGAEGGGEASGQSDLHHEILRFEDYVSLTPAEV 455
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14050.3162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHQ6_ECTSI2.970e-6491.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXD9_9PHAE1.830e-5883.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14050contigEcto-sp13_S_contig14050:2784..3167 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14050.3162.1mRNA_Ecto-sp13_S_contig14050.3162.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14050 2784..3168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14050.3162.1 ID=prot_Ecto-sp13_S_contig14050.3162.1|Name=mRNA_Ecto-sp13_S_contig14050.3162.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=128bp
DAQARDAETRWVAPWMVGLVDRFPGGAAGPRGRGGWDAGRVGLVGSEECE
AGLLRGASDGGALHSRGPDGSDMDICSAVSSHGSSVKSPEGAAGDGGAAG
GGEGGGLSDLHHEILRFEEYVSLTPAEV
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