prot_Ecto-sp13_S_contig14050.3161.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14050.3161.1
Unique Nameprot_Ecto-sp13_S_contig14050.3161.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length171
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14050.3161.1 vs. uniprot
Match: D8LHQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ6_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 4.930e-48
Identity = 146/173 (84.39%), Postives = 150/173 (86.71%), Query Frame = 0 
Query:    1 MMASTIKATGKPEKAAPVGXXXXXXXXXXXXXXXXXXXXXXXXPAKTNKQSIKQRVRAEAAEKSRLLRKAKLAMQKKMQXXXXXXXXXXXXXXXXXXXXXXTLPSPPSF--GSGCVVAAPPRASPASPGNATGARHAQRREAVHHDVEMKLGQWRRKRAREEAGLPGDGERQY 171
            MMA T KA GKPEKAAP   XXXXXXXXXXXXXXXXXXXXXXXPAKTNKQSIKQRVRAEAAEKSRLLRKAKLAMQKKMQ  XXXXXXXXXXXX        TL +PPSF  GSG VV APPRASPASPGNA+GAR  +RREAVHHDVE+KLGQWRRKRAREEAGLPGDGERQY
Sbjct:    1 MMAGTKKAPGKPEKAAPGDGXXXXXXXXXXXXXXXXXXXXXXXPAKTNKQSIKQRVRAEAAEKSRLLRKAKLAMQKKMQREXXXXXXXXXXXXGAGGAI--TLSAPPSFEHGSGSVVPAPPRASPASPGNASGARRTERREAVHHDVEVKLGQWRRKRAREEAGLPGDGERQY 171
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BLAST of mRNA_Ecto-sp13_S_contig14050.3161.1 vs. uniprot
Match: A0A6H5JXD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXD9_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 7.900e-40
Identity = 134/171 (78.36%), Postives = 142/171 (83.04%), Query Frame = 0 
Query:    1 MMASTIKATGKPEKAAPVGXXXXXXXXXXXXXXXXXXXXXXXXPAKTNKQSIKQRVRAEAAEKSRLLRKAKLAMQKKMQXXXXXXXXXXXXXXXXXXXXXXTLPSPPSFGSGCVVAAPPRASPASPGNATGARHAQRREAVHHDVEMKLGQWRRKRAREEAGLPGDGERQY 171
            MMAST KA GK EKAAP  XXXXXXXXXXXXXXXXXXXXXXX PAKTNKQSIKQRVRAEAAEKSRLLRKAKLAMQK++Q     XXXXXXXXXXXX     + PS    GS  V  APPRA   SPGNA+GAR A+RREAVHHDVE+KLGQWR+KRAREEAGLPGDGE+QY
Sbjct:   56 MMASTKKAPGKTEKAAPGXXXXXXXXXXXXXXXXXXXXXXXXKPAKTNKQSIKQRVRAEAAEKSRLLRKAKLAMQKRIQRESTAXXXXXXXXXXXXGATALSAPSSFEDGSDYVGPAPPRA---SPGNASGARRAERREAVHHDVEVKLGQWRKKRAREEAGLPGDGEQQY 223
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14050.3161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHQ6_ECTSI4.930e-4884.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXD9_9PHAE7.900e-4078.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 75..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14050contigEcto-sp13_S_contig14050:1388..2471 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14050.3161.1mRNA_Ecto-sp13_S_contig14050.3161.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14050 449..2471 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14050.3161.1 ID=prot_Ecto-sp13_S_contig14050.3161.1|Name=mRNA_Ecto-sp13_S_contig14050.3161.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=171bp
MMASTIKATGKPEKAAPVGGGGGEAAVVGFSPKKKKKQPNKKKPAKTNKQ
SIKQRVRAEAAEKSRLLRKAKLAMQKKMQRERTAAAAAAAAAEEEGAGGA
ATLPSPPSFGSGCVVAAPPRASPASPGNATGARHAQRREAVHHDVEMKLG
QWRRKRAREEAGLPGDGERQY
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