mRNA_Ecto-sp13_S_contig14046.3156.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14046.3156.1
Unique NamemRNA_Ecto-sp13_S_contig14046.3156.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14046.3156.1 vs. uniprot
Match: A0A8D1CTC0_PIG (KH type-2 domain-containing protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1CTC0_PIG)

HSP 1 Score: 168 bits (425), Expect = 5.300e-52
Identity = 85/88 (96.59%), Postives = 87/88 (98.86%), Query Frame = 1 
Query:    1 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYA 264
            MATNMSKKRKFVADGVF+ ELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRF+FPDDAVELYA
Sbjct:    1 MATNMSKKRKFVADGVFFVELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYA 88
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BLAST of mRNA_Ecto-sp13_S_contig14046.3156.1 vs. uniprot
Match: D7G6B0_ECTSI (KH type-2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B0_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 6.750e-50
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 1 
Query:   13 MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYA 264
            MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYA
Sbjct:    1 MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYA 84
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BLAST of mRNA_Ecto-sp13_S_contig14046.3156.1 vs. uniprot
Match: A0A7S2UUD3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUD3_9STRA)

HSP 1 Score: 157 bits (398), Expect = 8.620e-47
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 1 
Query:    1 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYA 264
            MA+N+SKKRKFVADGVFYAELN+LLT ELAE+GYAGVEVRVTPLRTEIII ATR QNVLGEKGQRIRELTSVVQKRFNF DDAVELYA
Sbjct:    1 MASNISKKRKFVADGVFYAELNQLLTSELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLGEKGQRIRELTSVVQKRFNFADDAVELYA 88
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BLAST of mRNA_Ecto-sp13_S_contig14046.3156.1 vs. uniprot
Match: A0A836CGW2_9STRA (Prokaryotic type K homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGW2_9STRA)

HSP 1 Score: 155 bits (393), Expect = 4.520e-46
Identity = 77/88 (87.50%), Postives = 85/88 (96.59%), Query Frame = 1 
Query:    1 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYA 264
            M TN+SKKRKFVADGVFYAELNEL+ +ELAE+GY+GVEVRVTPLRTEIII AT+PQNVLGEKGQRIRELTSVVQKRF+FPD+AVELYA
Sbjct:    1 MTTNISKKRKFVADGVFYAELNELMRRELAEDGYSGVEVRVTPLRTEIIIRATQPQNVLGEKGQRIRELTSVVQKRFSFPDNAVELYA 88
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BLAST of mRNA_Ecto-sp13_S_contig14046.3156.1 vs. uniprot
Match: W7TS51_9STRA (40s ribosomal protein s3-3 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS51_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.140e-45
Identity = 76/88 (86.36%), Postives = 83/88 (94.32%), Query Frame = 1 
Query:    1 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYA 264
            M TN+SKKRKF+ADGVFYAELNELLT+ELAE+GYAGVEVRV PLRTEIIISATR QNVLGEKGQRIRELT+V+QKRFNFPD  VEL+A
Sbjct:    1 MTTNISKKRKFIADGVFYAELNELLTRELAEDGYAGVEVRVVPLRTEIIISATRTQNVLGEKGQRIRELTTVIQKRFNFPDGVVELFA 88
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BLAST of mRNA_Ecto-sp13_S_contig14046.3156.1 vs. uniprot
Match: A0A7N0VL14_KALFE (30S ribosomal protein S3, chloroplastic n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0VL14_KALFE)

HSP 1 Score: 150 bits (378), Expect = 2.430e-45
Identity = 73/87 (83.91%), Postives = 82/87 (94.25%), Query Frame = 1 
Query:    4 ATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYA 264
            AT MSKKRKFVADGVFYAELNE+LT+ELAE+GY+GVEVR TP+RTEIII ATRPQNVLGEKG+RIRELTS+VQKRF FP+ +VELYA
Sbjct:    3 ATQMSKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRATPMRTEIIIRATRPQNVLGEKGRRIRELTSIVQKRFKFPEKSVELYA 89
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BLAST of mRNA_Ecto-sp13_S_contig14046.3156.1 vs. uniprot
Match: A0A8B8IZW7_PHODC (40S ribosomal protein S3-3 isoform X1 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A8B8IZW7_PHODC)

HSP 1 Score: 154 bits (388), Expect = 2.980e-45
Identity = 76/88 (86.36%), Postives = 85/88 (96.59%), Query Frame = 1 
Query:    1 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYA 264
            MAT MSKKRKFVADGVFYAELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTSVVQKRFNFP+++VELYA
Sbjct:    1 MATQMSKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENSVELYA 88
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BLAST of mRNA_Ecto-sp13_S_contig14046.3156.1 vs. uniprot
Match: A0A2P2LRP3_RHIMU (30S ribosomal protein S3, chloroplastic n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LRP3_RHIMU)

HSP 1 Score: 150 bits (380), Expect = 3.340e-45
Identity = 74/88 (84.09%), Postives = 84/88 (95.45%), Query Frame = 1 
Query:    1 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYA 264
            MAT MSKKRKFVADGVFYAELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELT++VQKRF FPD++VELYA
Sbjct:    1 MATQMSKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTALVQKRFKFPDNSVELYA 88
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BLAST of mRNA_Ecto-sp13_S_contig14046.3156.1 vs. uniprot
Match: B4G0E1_MAIZE (40S ribosomal protein S3-1 n=1 Tax=Zea mays TaxID=4577 RepID=B4G0E1_MAIZE)

HSP 1 Score: 150 bits (378), Expect = 5.420e-45
Identity = 73/88 (82.95%), Postives = 84/88 (95.45%), Query Frame = 1 
Query:    1 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYA 264
            MAT +SKK+KFV+DGVFYAELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTSVVQKRFNFP++ VELYA
Sbjct:    1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENGVELYA 88
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14046.3156.1 vs. uniprot
Match: A0A6I9RV82_ELAGV (40S ribosomal protein S3-3 isoform X2 n=4 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6I9RV82_ELAGV)

HSP 1 Score: 152 bits (383), Expect = 5.500e-45
Identity = 75/88 (85.23%), Postives = 85/88 (96.59%), Query Frame = 1 
Query:    1 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYA 264
            MAT MSKKRKFVADGVFYAELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTSVVQKRF+FP+++VELYA
Sbjct:    1 MATQMSKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFSFPENSVELYA 88
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14046.3156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8D1CTC0_PIG5.300e-5296.59KH type-2 domain-containing protein n=1 Tax=Sus sc... [more]
D7G6B0_ECTSI6.750e-50100.00KH type-2 domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2UUD3_9STRA8.620e-4790.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CGW2_9STRA4.520e-4687.50Prokaryotic type K homology domain-containing prot... [more]
W7TS51_9STRA2.140e-4586.3640s ribosomal protein s3-3 n=3 Tax=Monodopsidaceae... [more]
A0A7N0VL14_KALFE2.430e-4583.9130S ribosomal protein S3, chloroplastic n=1 Tax=Ka... [more]
A0A8B8IZW7_PHODC2.980e-4586.3640S ribosomal protein S3-3 isoform X1 n=2 Tax=Arec... [more]
A0A2P2LRP3_RHIMU3.340e-4584.0930S ribosomal protein S3, chloroplastic n=1 Tax=Rh... [more]
B4G0E1_MAIZE5.420e-4582.9540S ribosomal protein S3-1 n=1 Tax=Zea mays TaxID=... [more]
A0A6I9RV82_ELAGV5.500e-4585.2340S ribosomal protein S3-3 isoform X2 n=4 Tax=Mesa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14046contigEcto-sp13_S_contig14046:3734..4529 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score165.6
Seed ortholog evalue1e-38
Seed eggNOG ortholog2880.D7G6B0
Preferred nameRPS3
Model size264
KEGG koko:K02985
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000054,GO:0000056,GO:0000184,GO:0000226,GO:0000302,GO:0000702,GO:0000956,GO:0001726,GO:0001817,GO:0001819,GO:0001932,GO:0001934,GO:0002181,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003723,GO:0003729,GO:0003735,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005783,GO:0005789,GO:0005791,GO:0005819,GO:0005829,GO:0005840,GO:0005844,GO:0005856,GO:0005886,GO:0005911,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006355,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006407,GO:0006412,GO:0006413,GO:0006417,GO:0006518,GO:0006605,GO:0006611,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006970,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0008017,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008284,GO:0008534,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012505,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0015931,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016363,GO:0016787,GO:0016788,GO:0016798,GO:0016799,GO:0016829,GO:0016835,GO:0017148,GO:0019104,GO:0019219,GO:0019220,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0019866,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022407,GO:0022409,GO:0022607,GO:0022613,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030054,GO:0030155,GO:0030162,GO:0030425,GO:0030544,GO:0030684,GO:0030686,GO:0030688,GO:0030867,GO:0031072,GO:0031090,GO:0031110,GO:0031112,GO:0031113,GO:0031116,GO:0031252,GO:0031253,GO:0031256,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031334,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031503,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032069,GO:0032070,GO:0032071,GO:0032075,GO:0032077,GO:0032079,GO:0032268,GO:0032269,GO:0032270,GO:0032271,GO:0032273,GO:0032356,GO:0032357,GO:0032358,GO:0032587,GO:0032663,GO:0032743,GO:0032872,GO:0032874,GO:0032886,GO:0032944,GO:0032946,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0033674,GO:0033750,GO:0034097,GO:0034248,GO:0034249,GO:0034399,GO:0034599,GO:0034612,GO:0034613,GO:0034614,GO:0034641,GO:0034645,GO:0034655,GO:0035690,GO:0036477,GO:0042102,GO:0042104,GO:0042127,GO:0042129,GO:0042175,GO:0042221,GO:0042254,GO:0042325,GO:0042327,GO:0042493,GO:0042542,GO:0042769,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043043,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043280,GO:0043281,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043506,GO:0043507,GO:0043523,GO:0043524,GO:0043549,GO:0043603,GO:0043604,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044390,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045047,GO:0045184,GO:0045738,GO:0045739,GO:0045785,GO:0045859,GO:0045860,GO:0045862,GO:0045934,GO:0045935,GO:0045937,GO:0046006,GO:0046328,GO:0046330,GO:0046483,GO:0046677,GO:0046700,GO:0046907,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050657,GO:0050658,GO:0050670,GO:0050671,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050854,GO:0050856,GO:0050857,GO:0050862,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0051018,GO:0051029,GO:0051052,GO:0051053,GO:0051054,GO:0051090,GO:0051091,GO:0051092,GO:0051128,GO:0051130,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051225,GO:0051234,GO:0051236,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051251,GO:0051252,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051493,GO:0051495,GO:0051536,GO:0051540,GO:0051606,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051716,GO:0051879,GO:0052547,GO:0052548,GO:0055044,GO:0060255,GO:0060548,GO:0061481,GO:0065007,GO:0065009,GO:0070013,GO:0070181,GO:0070301,GO:0070302,GO:0070304,GO:0070507,GO:0070663,GO:0070665,GO:0070727,GO:0070848,GO:0070887,GO:0070925,GO:0070972,GO:0071159,GO:0071166,GO:0071236,GO:0071310,GO:0071345,GO:0071356,GO:0071363,GO:0071426,GO:0071428,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0072686,GO:0080090,GO:0080134,GO:0080135,GO:0090150,GO:0090304,GO:0090305,GO:0097064,GO:0097100,GO:0097159,GO:0097237,GO:0097447,GO:0097458,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098590,GO:0098827,GO:0120025,GO:0120038,GO:0140078,GO:0140097,GO:1900117,GO:1900119,GO:1901214,GO:1901215,GO:1901222,GO:1901224,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901700,GO:1901701,GO:1902229,GO:1902231,GO:1902531,GO:1902533,GO:1902544,GO:1902546,GO:1902903,GO:1902905,GO:1903037,GO:1903039,GO:1903320,GO:1903321,GO:1903506,GO:1905051,GO:1905053,GO:1990089,GO:1990090,GO:1990904,GO:2000112,GO:2000113,GO:2000116,GO:2001020,GO:2001021,GO:2001022,GO:2001056,GO:2001141,GO:2001233,GO:2001235,GO:2001242,GO:2001244,GO:2001270,GO:2001272
Exons3
EggNOG free text desc.oxidized purine nucleobase lesion DNA N-glycosylase activity
EggNOG OGsCOG0092@1,KOG3181@2759
Ec32 ortholog descriptionRibosomal protein S3, C-terminal
Ec32 orthologEc-10_001190.1
Cds size264
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462750.2942789-CDS-Ecto-sp13_S_contig14046:3733..38021681462750.2942789-CDS-Ecto-sp13_S_contig14046:3733..3802Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14046 3734..3802 +
1681462750.3076572-CDS-Ecto-sp13_S_contig14046:3950..41081681462750.3076572-CDS-Ecto-sp13_S_contig14046:3950..4108Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14046 3951..4108 +
1681462750.31733-CDS-Ecto-sp13_S_contig14046:4492..45291681462750.31733-CDS-Ecto-sp13_S_contig14046:4492..4529Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14046 4493..4529 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14046.3156.1prot_Ecto-sp13_S_contig14046.3156.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14046 3734..4529 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14046.3156.1

>prot_Ecto-sp13_S_contig14046.3156.1 ID=prot_Ecto-sp13_S_contig14046.3156.1|Name=mRNA_Ecto-sp13_S_contig14046.3156.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=88bp
MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIII
SATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYA
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mRNA from alignment at Ecto-sp13_S_contig14046:3734..4529+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14046.3156.1 ID=mRNA_Ecto-sp13_S_contig14046.3156.1|Name=mRNA_Ecto-sp13_S_contig14046.3156.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=796bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14046:3734..4529+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGACCAACATGTCGAAGAAGCGTAAGTTCGTGGCGGACGGCGTGTT
CTACGCCGAGCTCAACGAGGTAGGCCAGCCTACCACCTACCATCACTCGT
CACGAAGTACCTGATTTCTCTGCACTGTGGTCCCGAACCACCTCCTTTGG
CCCGTACTTGTCACCCCAGTTTTTCCATGATAATCACGAATCCGCAACCG
CTCGTCTCGGCCGCCAGCTTCTTACCCAGGAGCTTGCCGAGGAGGGTTAC
GCCGGTGTGGAGGTGCGCGTGACCCCTCTGCGTACTGAGATCATCATCAG
CGCCACCCGCCCGCAGAACGTGCTGGGCGAGAAGGGCCAGCGCATCAGAG
AGCTCACCTCCGTGGTGCAGAAGCGGTGCGTGCGCTCGGTCGCCTGTAAC
TCCTGTCTATATGTGTAAGCTGCTGTGCACACCTTCTAATAAAGAGTAGT
ACCGTACACTGATCGACATGCAGCAGGATCCAGCTGATGGAGAGGTCATG
TCAGGCTCCTCGTGTTGTCTGTGTAGCTTCCCACCATTAACGCTGTACTC
AATAGTTTGTTTTGAATGGAAGCGTAGACAGGAGGAATTGCTTGTCCGAC
GCTAGTCCGTGAAAAACGGCATGATTCGCACGAAGTGAGTCCGCTCGCTC
AGTGTACCAGGTAGCCCTATACTTTTACCCAACTTGGTAGACTGAAGAGC
TTGGCGCGAGTAGCTAGTGTGACGCAATCCTGTTGCTGTCTCACCCCTAC
GGTGTCCAGGTTCAACTTCCCTGACGACGCTGTCGAACTCTACGCG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14046:3734..4529+

>mRNA_Ecto-sp13_S_contig14046.3156.1 ID=mRNA_Ecto-sp13_S_contig14046.3156.1|Name=mRNA_Ecto-sp13_S_contig14046.3156.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=264bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14046:3734..4529+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGACCAACATGTCGAAGAAGCGTAAGTTCGTGGCGGACGGCGTGTT
CTACGCCGAGCTCAACGAGCTTCTTACCCAGGAGCTTGCCGAGGAGGGTT
ACGCCGGTGTGGAGGTGCGCGTGACCCCTCTGCGTACTGAGATCATCATC
AGCGCCACCCGCCCGCAGAACGTGCTGGGCGAGAAGGGCCAGCGCATCAG
AGAGCTCACCTCCGTGGTGCAGAAGCGGTTCAACTTCCCTGACGACGCTG
TCGAACTCTACGCG
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