prot_Ecto-sp13_S_contig14044.3155.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14044.3155.1
Unique Nameprot_Ecto-sp13_S_contig14044.3155.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length564
Homology
BLAST of mRNA_Ecto-sp13_S_contig14044.3155.1 vs. uniprot
Match: A0A6H5KDB5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB5_9PHAE)

HSP 1 Score: 964 bits (2493), Expect = 0.000e+0
Identity = 491/563 (87.21%), Postives = 512/563 (90.94%), Query Frame = 0
Query:    1 MAEAYLCIQLASTLFLAGRWVANRYSARRRQETVDDNTPGAGYTSVDINVEFGLECDTVEGAIMAVGTELAMKAQSKFFGSRTLRQRAITGLSPEFATHRRQMQLGLSELAARQGRTSQDPAEGFLDVRGELRDLSETAASQQSAIQAVADELVGVGNDFRYGTDQLIKGVAAVRTDLDNVIENVDGVRNEVVTGLLEVNHTVRQGTAVIYRSLQDLRCSMGELQLFMDQAREENSHYFQDISSRLNDVKSGLIALEATYVMREQQKELSKLQSSLSEAGMYLNQFTGTGGEDVGLLDKAHTCCCKVLRLRPHLDTLEAHEMAGIIMVATSYRKHAQLKPPATAKQYVFDSDFLNITNSLKPFWADHAAAHTPTWSNVVRYLLELSSSICLLPPEGLVLGELDTGLVEAFGELCCSQPSLLDRFPEVGGAAWRTLLQAKPLDELCRTSSAAEVDISLCNNKADLIQALLDARKPVGALTEVIENGGCKTCHHRKPDNSEENIGNDRSSAYSEGEVYESEEAKLAATLASVYENKSYPRLDCRAEPGDTAASDMEDFLARSPAW 563
            MAEAYLCIQLAS LF AGRW ANRYSA RR+ETVDDN PGAGYTSVDINVE GLECDTVEGAIMAVGTELAMKA  KFFGSRTLRQRAITGLSPEFATHRRQMQLGLSELAARQGRTSQ  AEGFLDVRG+LRDL                      NDFRYGTDQL+KGVAAVRTDLD VIEN++GVR EVVTGL EVNHTVRQGTAVIYRSLQDLRC MGELQL MDQAREENSHYFQDISSRLNDVK GLIALEATYVMREQQKELSKLQ+SLSEAG+YLNQFTGTGG D+GLLDKAHTCCCKVLRLRPHLDTL+AH+MAGIIMVATSYRKHAQLKPP TAKQYVFDSDFLNITN LKPFWADHAAAHTPTWSNVVRYLLELSSSICLLPPEGLVLGELD GLVEAFGELCCSQPSLLDRFPEVGGAAWR+LLQAKPLDELCRTS+AAEVDISLCNNKADLIQALLDA KP+GALT+VI+NGG KTC HRKPD+S+E IGNDR+SAY +GEVYESEE+KLAA+LASVYENKS PRLD RAEP DTAASDMEDFLAR PAW
Sbjct:  290 MAEAYLCIQLASALFFAGRWAANRYSAHRRRETVDDNKPGAGYTSVDINVEVGLECDTVEGAIMAVGTELAMKAHRKFFGSRTLRQRAITGLSPEFATHRRQMQLGLSELAARQGRTSQALAEGFLDVRGDLRDLXXXXXXXXXXXXXXXXXXXXXXNDFRYGTDQLVKGVAAVRTDLDTVIENMEGVREEVVTGLQEVNHTVRQGTAVIYRSLQDLRCDMGELQLSMDQAREENSHYFQDISSRLNDVKLGLIALEATYVMREQQKELSKLQNSLSEAGIYLNQFTGTGGGDLGLLDKAHTCCCKVLRLRPHLDTLDAHKMAGIIMVATSYRKHAQLKPPVTAKQYVFDSDFLNITNLLKPFWADHAAAHTPTWSNVVRYLLELSSSICLLPPEGLVLGELDPGLVEAFGELCCSQPSLLDRFPEVGGAAWRSLLQAKPLDELCRTSNAAEVDISLCNNKADLIQALLDAGKPLGALTQVIDNGGYKTCCHRKPDSSDEVIGNDRNSAYGDGEVYESEESKLAASLASVYENKSSPRLDPRAEPSDTAASDMEDFLARCPAW 852          
BLAST of mRNA_Ecto-sp13_S_contig14044.3155.1 vs. uniprot
Match: D7FKB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKB6_ECTSI)

HSP 1 Score: 637 bits (1642), Expect = 1.690e-224
Identity = 329/384 (85.68%), Postives = 341/384 (88.80%), Query Frame = 0
Query:    1 MAEAYLCIQLASTLFLAGRWVANRYSARRRQETVDDNTPGAGYTSVDINVEFGLECDTVEGAIMAVGTELAMKAQSKFFGSRTLRQRAITGLSPEFATHRRQMQLGLSELAARQGRTSQDPAEGFLDVRGELRDLSETAASQQSAIQAVADELVGVGNDFRYGTDQLIKGVAAVRTDLDNVIENVDGVRNEVVTGLLEVNHTVRQGTAVIYRSLQDLRCSMGELQLFMDQAREENSHYFQDISSRLNDVKSGLIALEATYVMREQQKELSKLQSSLSEAGMYLNQFTGTGGEDVGLLDKAHTCCCKVLRLRPHLDTLEAHEMAGIIMVATSYRKHAQLKPPATAKQYVFDSDFLNITNSLKPFWADHAAAHTPTWSNVVRYLLE 384
            MAEAYLCIQLASTLFLAGRWVANRYSARRR+ET D N PGAG TSV+INVEFG ECDTVEGAIMAVGTELAMKAQ KFFGSRTLRQRAITGLSPEFATHRRQMQLGLSEL ARQGRTSQ  AEGFLDVRG+ RDL                          YGTDQLIKGVAAV TDLD VIENV+GVRNEVVTGLLEVNHT+RQGTAVIYRSLQDLRC MGELQL MDQAREENS YFQD+SSRLNDVKSGLIALEATYVMREQQKELSKLQ+SLSEAGMYLNQFTGTGGED+GLLDKAHTCCCKVLRLRPHL+TL+AH+MAGIIMVATSYRKHAQLKPPATAKQYVFDSDFLNITNSLK FWADHAAAHTPTWSNVV YLL+
Sbjct:    1 MAEAYLCIQLASTLFLAGRWVANRYSARRRRETEDYNKPGAGDTSVEINVEFGPECDTVEGAIMAVGTELAMKAQRKFFGSRTLRQRAITGLSPEFATHRRQMQLGLSELVARQGRTSQALAEGFLDVRGDFRDLXXXXXXXXXXXXXXXXXXXXXXXXXXYGTDQLIKGVAAVHTDLDTVIENVEGVRNEVVTGLLEVNHTLRQGTAVIYRSLQDLRCVMGELQLSMDQAREENSLYFQDVSSRLNDVKSGLIALEATYVMREQQKELSKLQNSLSEAGMYLNQFTGTGGEDLGLLDKAHTCCCKVLRLRPHLETLDAHKMAGIIMVATSYRKHAQLKPPATAKQYVFDSDFLNITNSLKHFWADHAAAHTPTWSNVVCYLLD 384          
BLAST of mRNA_Ecto-sp13_S_contig14044.3155.1 vs. uniprot
Match: D7G6V2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6V2_ECTSI)

HSP 1 Score: 345 bits (884), Expect = 1.750e-110
Identity = 204/413 (49.39%), Postives = 255/413 (61.74%), Query Frame = 0
Query:   72 MKAQSKFFGSRTLRQRAITGLSPEFATHRRQMQLGLSELAARQGRTSQDPAEGFLDVRGELRDLSETAASQQSAIQAVADELVGVGNDFRYGTDQLIKGVAAVRTDLDNVIENVDGVRNEVVTGLLEVNHTVRQGTAVIYRSLQDLRCSMGELQLFMDQAREENSHYFQDISSRLNDVKSGLIALEATYVMREQQKELSKLQSSLSEAGMYLNQFTGTGGEDVGLLDKAHTCCCKVLRLRPHLDTLEAHEMAGIIMVATSYRKHAQLKPPATAKQYVFDSDFLNITNSLKPFWADHAAAHTPTWSNVVRYLLELSSSICLLPPEGLVLGELDTGLVEAFGELCCSQPSLLDRFPEVGGAAWRTLLQAKPLDELCRTSSAAEVDISLCNNKADLIQALLDARK--PVGALTEVI 482
            MKA S +  +R  R RAI GLS EFA HR Q +                            RDL+     QQSA QA+A+ELVG+ +     TD+L +G AAVRTDL  V+E VDG+ N V  GLLEVN+ VR GTAVIYRSL+ L   M  L+  +D+A+ ENS  FQ +SSRL        A E       QQ++   LQ SL +A M L +FTGTGG +  LLD+A   C ++L   PH D+L  H +AG I +A S+ KHAQ +PPA AK YVFD  F N+  S + FW D  AA T     VV YLL + SS+C+LPPEGL+L +LD  LV+AFG LC S+PS+LDR+PEVGGAA R LLQ+KPLDELCR S +  VDI+LC+N+ADLIQ +LD RK  PV A  + +
Sbjct:    1 MKAHSGWIQARMRRNRAIPGLSKEFAEHRSQAR----------------------------RDLAGNTTGQQSASQAIAEELVGI-HAADLQTDKLTRGKAAVRTDLGTVME-VDGIWNSVSNGLLEVNYAVRHGTAVIYRSLEGLHEDMASLRSCIDKAQRENSKCFQQVSSRLQ-------AFEEYVRSHHQQQDGKSLQRSLKKARMCLIEFTGTGGGEPQLLDQAKESCMEILIREPHSDSLRVHFLAGCIAIAASFTKHAQQEPPARAKAYVFDGVFRNVMLSFESFWTDPCAARTRNGICVVEYLLSIVSSVCMLPPEGLLLPQLDDRLVKAFGVLCSSEPSILDRYPEVGGAAVRALLQSKPLDELCRMSKSLGVDIALCDNRADLIQGMLDKRKSIPVDAAMDQV 376          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14044.3155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KDB5_9PHAE0.000e+087.21Integrase catalytic domain-containing protein n=1 ... [more]
D7FKB6_ECTSI1.690e-22485.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G6V2_ECTSI1.750e-11049.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..563
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14044contigEcto-sp13_S_contig14044:430..4250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14044.3155.1mRNA_Ecto-sp13_S_contig14044.3155.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14044 119..4250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14044.3155.1 ID=prot_Ecto-sp13_S_contig14044.3155.1|Name=mRNA_Ecto-sp13_S_contig14044.3155.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=564bp
MAEAYLCIQLASTLFLAGRWVANRYSARRRQETVDDNTPGAGYTSVDINV
EFGLECDTVEGAIMAVGTELAMKAQSKFFGSRTLRQRAITGLSPEFATHR
RQMQLGLSELAARQGRTSQDPAEGFLDVRGELRDLSETAASQQSAIQAVA
DELVGVGNDFRYGTDQLIKGVAAVRTDLDNVIENVDGVRNEVVTGLLEVN
HTVRQGTAVIYRSLQDLRCSMGELQLFMDQAREENSHYFQDISSRLNDVK
SGLIALEATYVMREQQKELSKLQSSLSEAGMYLNQFTGTGGEDVGLLDKA
HTCCCKVLRLRPHLDTLEAHEMAGIIMVATSYRKHAQLKPPATAKQYVFD
SDFLNITNSLKPFWADHAAAHTPTWSNVVRYLLELSSSICLLPPEGLVLG
ELDTGLVEAFGELCCSQPSLLDRFPEVGGAAWRTLLQAKPLDELCRTSSA
AEVDISLCNNKADLIQALLDARKPVGALTEVIENGGCKTCHHRKPDNSEE
NIGNDRSSAYSEGEVYESEEAKLAATLASVYENKSYPRLDCRAEPGDTAA
SDMEDFLARSPAW*
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