prot_Ecto-sp13_S_contig10317.315.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10317.315.1
Unique Nameprot_Ecto-sp13_S_contig10317.315.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length388
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10317.315.1 vs. uniprot
Match: D7G4J5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J5_ECTSI)

HSP 1 Score: 597 bits (1538), Expect = 1.420e-207
Identity = 329/369 (89.16%), Postives = 342/369 (92.68%), Query Frame = 0 
Query:    1 RAGTREESASPELVGVTREQRKREGSGASVSSLRSPSTPSGRRASGGPLSRLLPAPTGSIGSEGGDVSTGSDNKSVKAEVLAEEQPASTAAAPSGGSGNLAKKKKTFMEKFGDMLEAAAETAIPAAPGGGGVGYGSRAATARPREWEQWDAAPLLEFMKEEARTAADKARKEEIARTGGDKDKLVALVKAWYTPFLSQAEFVRQKEALTTQHVGMVDDSGRCVSAKSSSVASPVRGRRGGEGGPPSAAIGSADISPGLFLSRRSRAKNASPTSTKPGDPLRLSRAPEESGLELGGGDLDTASARSAAAGAPAGEGSGGISRAVVVGYVVDGGGGWGKVGSASCRDIHYLVEVEASSAEGGTRSWACYKR 369
            RAGTREESASPELVG TREQRKREGSGASV+SLRSPSTPSGRRASGGPLSRL+PAPTGSI SEGGDVSTGSDNKSVK++VLAEEQPASTAAAPSGGSGNLAKKKKTFMEKFGDMLEAAAETAIPAAPGGGGVGYGSRAATA PREWEQWDA  LLEFMKEEARTAADKARKE+IARTGGDKDKLVALVK WYTPFLSQAEF+RQKEALTTQHVG VD+SGRCVSAK+SS+ASPVRGRRGGEGGP S AIGSAD+SPGLFLSRRSRAK+ SP STKPGD LRLS APEESGLELGGG  DTASARSAAAG    EG+GGI RAVVVGYVVDGGGGW KVGSA  RDIH+LVEVE  SA GGTR WACYKR
Sbjct:  343 RAGTREESASPELVGFTREQRKREGSGASVTSLRSPSTPSGRRASGGPLSRLMPAPTGSIVSEGGDVSTGSDNKSVKSDVLAEEQPASTAAAPSGGSGNLAKKKKTFMEKFGDMLEAAAETAIPAAPGGGGVGYGSRAATAGPREWEQWDAPLLLEFMKEEARTAADKARKEDIARTGGDKDKLVALVKTWYTPFLSQAEFIRQKEALTTQHVGTVDNSGRCVSAKTSSLASPVRGRRGGEGGPLSPAIGSADLSPGLFLSRRSRAKDTSPRSTKPGDALRLSPAPEESGLELGGGVFDTASARSAAAG----EGAGGIYRAVVVGYVVDGGGGWRKVGSAFSRDIHFLVEVEVFSAGGGTRFWACYKR 707
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10317.315.1 vs. uniprot
Match: A0A6H5JC90_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC90_9PHAE)

HSP 1 Score: 534 bits (1376), Expect = 8.330e-175
Identity = 304/377 (80.64%), Postives = 312/377 (82.76%), Query Frame = 0 
Query:   51 RLLPAPTGSIGSEGGDVSTGSDNKSVKAEVLAEEQPASTAAAPSGGSGNLAKKKKTFMEKFGDMLEAAAETAIPAAPGGGGVG-------------------------------------YGSRAATARPREWEQWDAAPLLEFMKEE--ARTAADKARKEEIARTGGDKDKLVALVKAWYTPFLSQAEFVRQKEALTTQHVGMVDDSGRCVSAKSSSVASPVRGRRGGEGGPPSAAIGSADISPGLFLSRRSRAKNASPTSTKPGDPLRLSRAPEESGLELGGGDLDTASARSAAAGAPAGEGSGGISRAVVVGYVVDGGGGWGKVGSASCRDIHYLVEVEASSAEGGTRSWACYKRFSDFRALWTGMSRRYPRME 388
            RLLPAPT SI SEGGDVSTGSDNKSVKA+VLAEEQP+S AAAPSGGSGNLAK KKTFMEKFGDMLEAAAETAIPAAPGGGGVG                                     YGSRAATA PREWEQWDAAPLLEFMKEE  AR  ADK RKEEIARTGGDKDKLVALVKAWYTPFLSQAEF+RQKE L TQHVGMVDDSGRCVSAKSSS+ASPVRGRRG      SAAIGS+DISPGLFLSRRSRA+NASP STKPGD LRLS APEESGLELGGG LDTASARSAA GAPAGEGSGGI RAVVVGYVVDGGGG G+V SAS RDIHYLVEVEASSA GGTRSWACYKRFSDFRALWTG+SRRYPRME
Sbjct:    3 RLLPAPTASIVSEGGDVSTGSDNKSVKADVLAEEQPSSMAAAPSGGSGNLAK-KKTFMEKFGDMLEAAAETAIPAAPGGGGVGDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGVGYGSRAATAGPREWEQWDAAPLLEFMKEETQARMTADKVRKEEIARTGGDKDKLVALVKAWYTPFLSQAEFIRQKEVLATQHVGMVDDSGRCVSAKSSSLASPVRGRRGXXXXXXSAAIGSSDISPGLFLSRRSRARNASPRSTKPGDALRLSPAPEESGLELGGGVLDTASARSAAVGAPAGEGSGGIFRAVVVGYVVDGGGGRGRVASASSRDIHYLVEVEASSAGGGTRSWACYKRFSDFRALWTGLSRRYPRME 378
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10317.315.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4J5_ECTSI1.420e-20789.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC90_9PHAE8.330e-17580.64PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 155..175
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 339..388
e-value: 2.7E-5
score: 25.8
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 340..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10317contigEcto-sp13_S_contig10317:456..3631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10317.315.1mRNA_Ecto-sp13_S_contig10317.315.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10317 456..3632 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10317.315.1 ID=prot_Ecto-sp13_S_contig10317.315.1|Name=mRNA_Ecto-sp13_S_contig10317.315.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=388bp
RAGTREESASPELVGVTREQRKREGSGASVSSLRSPSTPSGRRASGGPLS
RLLPAPTGSIGSEGGDVSTGSDNKSVKAEVLAEEQPASTAAAPSGGSGNL
AKKKKTFMEKFGDMLEAAAETAIPAAPGGGGVGYGSRAATARPREWEQWD
AAPLLEFMKEEARTAADKARKEEIARTGGDKDKLVALVKAWYTPFLSQAE
FVRQKEALTTQHVGMVDDSGRCVSAKSSSVASPVRGRRGGEGGPPSAAIG
SADISPGLFLSRRSRAKNASPTSTKPGDPLRLSRAPEESGLELGGGDLDT
ASARSAAAGAPAGEGSGGISRAVVVGYVVDGGGGWGKVGSASCRDIHYLV
EVEASSAEGGTRSWACYKRFSDFRALWTGMSRRYPRME
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf